BAC Information

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BAC

Clone NameB6Ng01-278H13
Chromosome7 (Build37)
Map Location 80,785,130 - 80,786,272
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042880, LOC233391, LOC665570, LOC100042029, EG384643, LOC625243, 4930429H19Rik, LOC665588, Rgma, Chd2, 1810026B05Rik, EG665610
Downstream geneLOC244061, A830073O21Rik, St8sia2, LOC100042127, LOC100042140, LOC546979, Slco3a1, EG665308
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278H13.bB6Ng01-278H13.g
ACCGA078706GA078707
length1,0741,143
definitionB6Ng01-278H13.b B6Ng01-278H13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtattgtattcctggaggaattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattacagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
tcattggtgcactatattgatgacattatgctgattggaccaagtgaaca
ggaagtagcaaccactttggactcattggtaacacatatgtgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgtagagatattccttctaaggt
gaaagataagttattgcacctggcccctcctacaaccaagaaagaagcac
aacgtttagtgggcctatttggattctggagacaacacatccctcacttt
gggtgtgttacttaggcctatttaccaagtgactcggaagcttgcttagc
ttttgtgtggggcctgggaacaaggagaagccctttcaacaggtccaggc
tgctgtgcaggctgctctaccacttgggacatatgacccagcagaacccg
atgtactgaggtgtctgtggctgatagagattgctgtttaggagcctcct
gtgcaagaccctctgtgaggtgaa
gaattcagggcctgatgtgtgctagccaactgtttaatccctgaaaacat
cttggctcttattattttttccttccttccctctttcttcctcctcttcc
tcttcctcttgagataggagatgaggttttgttatgaggaagtagggaag
ggcattaggctcaggaggtttacaaggccatgaaaggtacaaggctcctc
ctctagcagtaaccaatggctggggagaagagactctgggggagctgcct
gcaggttcaaagatgcagcttccacgagtcctcatcactgctgtggcggg
ccttttgatgacataactgcctttaactagccatgctcctgcaaggcacc
ccactgaagatgggccgtggtgacccacacttttagacccagcactggag
actcaaaggtcagtctctgagttcaaggccagtctggtctacagagtgag
ttccaggataggcagggctacgccgagaagcactgtcacaaacaaaacaa
aaaacagaaatacaagcagcagcagcagcagcagcagcagtaacagcagc
agcaacaagaaaacccccaaacaaacaaacaaacaagaaacctccatgac
atgaccagttcaccaagttagatgtgagtggaatcaatttatccatctgt
ttgggtgtccagtctaggcaggtctgttcatagctacccaggaaatgtcg
caaagcgagttgctaaattcccttcacaagagatttctgatttctttcta
atttccagagattgtaatcctcttcccctcagctttgcatgtagttggaa
ttgcgggtgtggaccactattgttgggtattatgtctggactccaccccc
acagttacctgggcagcagccccagttaccaggcaacggccaggtaggcc
tggaccacttaaaagggctgcttggctcctcctcctctcctctcttgtct
ctcttgtactctgtctctctctctgctcccttatcccccctcctctttcc
cctctcaccacgtggtcatggccggcctctacttctctattcctctctgc
tttctctgcctctgcctaccctctactcccctcccatgcctgaataagcc
atttcctaatactataacaggttgtgtggcctgactctcaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_80785130_80786272
seq2: B6Ng01-278H13.g_62_1204

seq1  GAATTCAGGGCCTGATGTGTGCTAGCCAACTGTTTAATCCCTGAAAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCCTGATGTGTGCTAGCCAACTGTTTAATCCCTGAAAACAT  50

seq1  CTTGGCTCTTATTATTTTTTCCTTCCTTCCCTCTTTCTTCCTCCTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCTTATTATTTTTTCCTTCCTTCCCTCTTTCTTCCTCCTCTTCC  100

seq1  TCTTCCTCTTGAGATAGGAGATGAGGTTTTGTTATGAGGAAGTAGGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTTGAGATAGGAGATGAGGTTTTGTTATGAGGAAGTAGGGAAG  150

seq1  GGCATTAGGCTCAGGAGGTTTACAAGGCCATGAAAGGTACAAGGCTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTAGGCTCAGGAGGTTTACAAGGCCATGAAAGGTACAAGGCTCCTC  200

seq1  CTCTAGCAGTAACCAATGGCTGGGGAGAAGAGACTCTGGGGGAGCTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCAGTAACCAATGGCTGGGGAGAAGAGACTCTGGGGGAGCTGCCT  250

seq1  GCAGGTTCAAAGATGCAGCTTCCACGAGTCCTCATCACTGCTGTGGCGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTCAAAGATGCAGCTTCCACGAGTCCTCATCACTGCTGTGGCGGG  300

seq1  CCTTTTGATGACATAACTGCCTTTAACTAGCCATGCTCCTGCAAGGCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGATGACATAACTGCCTTTAACTAGCCATGCTCCTGCAAGGCACC  350

seq1  CCACTGAAGATGGGCCGTGGTGACCCACACTTTTAGACCCAGCACTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAAGATGGGCCGTGGTGACCCACACTTTTAGACCCAGCACTGGAG  400

seq1  ACTCAAAGGTCAGTCTCTGAGTTCAAGGCCAGTCTGGTCTACAGAGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGGTCAGTCTCTGAGTTCAAGGCCAGTCTGGTCTACAGAGTGAG  450

seq1  TTCCAGGATAGGCAGGGCTACGCCGAGAAGCACTGTCACAAACAAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGATAGGCAGGGCTACGCCGAGAAGCACTGTCACAAACAAAACAA  500

seq1  AAAACAGAAATACAAGCAGCAGCAGCAGCAGCAGCAGCAGTAACAGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAAATACAAGCAGCAGCAGCAGCAGCAGCAGCAGTAACAGCAGC  550

seq1  AGCAACAAGAAAACCCCCAAACAAACAAACAAACAAGAAACCTCCATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAGAAAACCCCCAAACAAACAAACAAACAAGAAACCTCCATGAC  600

seq1  ATGACCAGTTCACCAAGTTAGATGTGAGTGGAATCAATTTATCCATCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAGTTCACCAAGTTAGATGTGAGTGGAATCAATTTATCCATCTGT  650

seq1  TTGGGTGTCCAGTCTAGGCAGGTCTGTTCATAGCTACCCAGGAAATGTCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGTCCAGTCTAGGCAGGTCTGTTCATAGCTACCCAGGAAATGTCG  700

seq1  CAAAGCGAGTTGCTAAATTCCCTTCACAAGAGATTTCTGATTTCTTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCGAGTTGCTAAATTCCCTTCACAAGAGATTTCTGATTTCTTTCTA  750

seq1  ATTTCCAGAGATTGTAATCCTCTTCCCCTCAGCTTTGCATGTAGTTGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGAGATTGTAATCCTCTTCCCCTCAGCTTTGCATGTAGTTGGAA  800

seq1  TTGCGGGTGTGGACCACTATTGTT-GGTATTATGTCTGGACTCCACCCCC  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTGCGGGTGTGGACCACTATTGTTGGGTATTATGTCTGGACTCCACCCCC  850

seq1  ACAGTTACCT-GGCAGCAGCCCCAGTTACCAGGCAACGGCCAGGTAGGCC  898
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTACCTGGGCAGCAGCCCCAGTTACCAGGCAACGGCCAGGTAGGCC  900

seq1  TGGACCACTTAAAAGGGGCTGCTTGGCTCCTCCTCCTCT-CTCTCTTGTC  947
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  TGGACCACTTAAAA-GGGCTGCTTGGCTCCTCCTCCTCTCCTCTCTTGTC  949

seq1  TCTCTTGTACTCTTGTCTCTCTCTCTTGCTCCCTTATTCCCCCT-CTCTT  996
      |||||||||||| |||||||||||| ||||||||||| |||||| |||||
seq2  TCTCTTGTACTC-TGTCTCTCTCTC-TGCTCCCTTATCCCCCCTCCTCTT  997

seq1  TCCCCCTCTCACCACGTGGTCATGGCCGGCCTCTACTTCTCTATT-CTCT  1045
      | ||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  T-CCCCTCTCACCACGTGGTCATGGCCGGCCTCTACTTCTCTATTCCTCT  1046

seq1  CTGCCTTTCTCTGCCTCTG-CTACCCTCTTAACTCCCCTCCCCATGCCCT  1094
      ||| ||||||||||||||| |||||||||  |||||||| |||||| |||
seq2  CTG-CTTTCTCTGCCTCTGCCTACCCTCT--ACTCCCCT-CCCATG-CCT  1091

seq1  GAATAAACTCTATTCT-ATACTAT-ACAGG-TGTGTGGCTGGTCTCTCAG  1141
      |||||| |  | | || ||||||| ||||| ||||||||  | |||||||
seq2  GAATAAGCCATTTCCTAATACTATAACAGGTTGTGTGGCCTGACTCTCAG  1141

seq1  GG  1143
      ||
seq2  GG  1143