BAC Information

Click to search

BAC

Clone NameB6Ng01-279B12
Chromosome7 (Build37)
Map Location 14,397,117 - 14,398,022
singlet/doubletsinglet
Overlap geneSult2a1
Upstream geneZfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194
Downstream geneEG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279B12.b
ACCGA079165
length1,130
definitionB6Ng01-279B12.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcccatcatataataatcaaaccaccaaataaaatcagtaagg
gaaaaagtcaagtaacatataaaggcagccctatcagaatttcacctgac
ttctccccacagattacagaagccagaagatccagggaaaatgtcataca
gacccacagtgaacacaaatgctagcccaggctactatatccaacaaaag
tctcaattactatagatggagaaactaaggtattccatggcaaaaccaaa
ttcacacaatatctttccacaaacccagcccttcaaaggataataaaagg
acagcttgaacacaatgagggaaactaagctcgagaaaaagaaagaaatt
aaccggtcaacaaacctaaaaacacagccacatgaacagaattccaaatc
taagaataaacataacaggaagcaataacaacttttccttaatatttctt
aatatcaatggactgaattcacctataaaaagacatacaataacagattg
gttatgtaaaaaggaccccactttttgctgcatacagaaaatccacctca
ggcataaaggaagacactacctcacagcaaaaggctggaaaacgattttc
caagcaaatggtcccaagaaccaagctggagtagccactctaatatgaaa
taaaatggactttcttttttttttaaatggctcatcataatttattttat
attaaaatgtacagcttttcttgggggggttccttcttttttttgaagta
actgactaaaaagaaaactgttaaatataagagttctgctggctcctact
ttatacaaggtcgtgcacacctgtccttcttggcccttaatgtcatctgt
ccaggtgcaaaggctacaaaaggaagcaatagaaacagacacaaataact
tttctgcttttttacttgagatgtgtaagattactttgtgctattcacaa
gctacttttctatttttccttaaaaaataatttccaatattttataaaga
tagaaaaatctacagatggaatgaaaatgtaagttagagcattcataaaa
tagcacttacaccaaattcatgattaaaaaaaactgcagtatttggacat
atatgaatgcctcaactgacagatacactg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14397117_14398022
seq2: B6Ng01-279B12.b_288_1178

seq1  GCAAAACCAAATTCACACAATATCTTTCCACAAACCCAGCCCTTCAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACCAAATTCACACAATATCTTTCCACAAACCCAGCCCTTCAAAGG  50

seq1  ATAATAAAGGGAAAGCTTCAACACAATGAGGGAAACTACGCTCTAGAAAA  100
      |||||||| ||| ||||| ||||||||||||||||||| |||| ||||||
seq2  ATAATAAAAGGACAGCTTGAACACAATGAGGGAAACTAAGCTCGAGAAAA  100

seq1  AGCAAGAAATTAACATGTCAACAAACCTAAAAGAACATAGCCACGTGAAC  150
      || |||||||||||  |||||||||||||||  |||| |||||| |||||
seq2  AGAAAGAAATTAACCGGTCAACAAACCTAAA--AACACAGCCACATGAAC  148

seq1  AGAAGTCCAAATCGAAGAATAAACATAACAGGAAGCAATAACAACTTTTC  200
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGAATTCCAAATCTAAGAATAAACATAACAGGAAGCAATAACAACTTTTC  198

seq1  CTTAATATTTCTTAATATCAATGGACTGAATTCACCAATAAAAAGACATA  250
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTAATATTTCTTAATATCAATGGACTGAATTCACCTATAAAAAGACATA  248

seq1  CAATAACAGACTGGTTATGTAAATAGGACCCCACTTTTTGCTGCAGAGAG  300
      |||||||||| |||||||||||| ||||||||||||||||||||| | ||
seq2  CAATAACAGATTGGTTATGTAAAAAGGACCCCACTTTTTGCTGCATACAG  298

seq1  GAAATCCACCTCAGGCATAAAGGAAGACACTACCTCAAAGTAAAAGGCTG  350
       |||||||||||||||||||||||||||||||||||| || |||||||||
seq2  AAAATCCACCTCAGGCATAAAGGAAGACACTACCTCACAGCAAAAGGCTG  348

seq1  GAAAACAATTTTCCAAGAAAATGTTCCCAAGAAACAAGCTGGAGTAGCCA  400
      |||||| |||||||||| ||||| ||||||||| ||||||||||||||||
seq2  GAAAACGATTTTCCAAGCAAATGGTCCCAAGAACCAAGCTGGAGTAGCCA  398

seq1  CTCTAATATGAAATAAAATGGACTTTCTTTTTTTTTTTAATGGCTCATCA  450
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCTAATATGAAATAAAATGGACTTTCTTTTTTTTTTAAATGGCTCATCA  448

seq1  TAATTTATTTTACATTAAAATGTACAGCTTT--TTGGGGGGATTCCTTC-  497
      |||||||||||| ||||||||||||||||||  |||||||| ||||||| 
seq2  TAATTTATTTTATATTAAAATGTACAGCTTTTCTTGGGGGGGTTCCTTCT  498

seq1  TTTTTTTGAAGTAACTGACTAAAAAGAAAACAGGTAAATACAAGAGTTCT  547
      ||||||||||||||||||||||||||||||| | |||||| |||||||||
seq2  TTTTTTTGAAGTAACTGACTAAAAAGAAAACTGTTAAATATAAGAGTTCT  548

seq1  GCTGGCTCCTGTTTTATATAAGGTCGTGCACACCTGTCCTGCTTGGCCCT  597
      ||||||||||  |||||| ||||||||||||||||||||| |||||||||
seq2  GCTGGCTCCTACTTTATACAAGGTCGTGCACACCTGTCCTTCTTGGCCCT  598

seq1  TACTGTTATCTGTCCAGGTGCAAAGGCTACAAAAGGAAGCAATAGAAACA  647
      || ||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCATCTGTCCAGGTGCAAAGGCTACAAAAGGAAGCAATAGAAACA  648

seq1  GACACAAATAACTTTTCTGATTTTTTACTTGAGATTTGTAAGCTTACTTT  697
      ||||||||||||||||||| ||||||||||||||| |||||| |||||||
seq2  GACACAAATAACTTTTCTGCTTTTTTACTTGAGATGTGTAAGATTACTTT  698

seq1  GTGCTATTCACAAGCTACTTTTCTATTTTTCCTTAAAACATAA-TTCCAA  746
      |||||||||||||||||||||||||||||||||||||| |||| ||||||
seq2  GTGCTATTCACAAGCTACTTTTCTATTTTTCCTTAAAAAATAATTTCCAA  748

seq1  TATTTTATAAAGATAGAAAAATCTACAGATGGAATGAAAATGTTAAGTTA  796
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATTTTATAAAGATAGAAAAATCTACAGATGGAATGAAAATG-TAAGTTA  797

seq1  GAAGCATTTCCATAAAATAGCAACTTTACACCAAATTCATGATTTTTAAA  846
      | ||||||  ||||||||||||   |||||||||||||||||   |||||
seq2  G-AGCATT--CATAAAATAGCA--CTTACACCAAATTCATGA---TTAAA  839

seq1  AACACTTGCCAAGTATTTGGACATATATGAAATGCTTCAAAACCTGACAG  896
      || |  |||  |||||||||||||||||| ||||| ||||   |||||||
seq2  AAAAACTGC--AGTATTTGGACATATATG-AATGCCTCAA---CTGACAG  883

seq1  ATAAACACTG  906
      ||  ||||||
seq2  AT--ACACTG  891