BAC Information

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BAC

Clone NameB6Ng01-280I14
Chromosome7 (Build37)
Map Location 70,674,079 - 70,674,705
singlet/doubletsinglet
Overlap geneOtud7a
Upstream geneEG665038, LOC669222, LOC384631, LOC622243, EG622251, Chrna7
Downstream geneLOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280I14.bB6Ng01-280I14.g
ACCGA080238GA080239
length1,213625
definitionB6Ng01-280I14.b B6Ng01-280I14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccagaaatccaaagaagaattaataccaacaatattcaaatt
acaccatcaaataggaaaagaaggctcccaaactctcatcacagtgctgc
tatgataccaaaactagatactggcaaaacaaataaacgaaaagaatatt
tcagacttgtctccctgacatagatgtagatattctcaataaaataccac
caaacaaaactcaacctcatattaaaaaaattatttaatgtaaccagatt
ggttttattccagagatgcaggggtggttcaacataaatgaatctaaaat
attatctatcacataaatagacttaaagacagaaattttataatcatctt
gttagatgcataaaaattgtttgacaaaatgctatatgccttcataataa
atgtcatgaagaggcaaggaattgagggagcataccgcaacataataaag
gctatataaaatgaaagtccagccagtatgacgctaaatgaaggaaagct
cacgagttctcattaagatcaggatcaagccaagggtgtgcactctctcc
atattcaatacttgaagtgtcagctggtgcagtaagaaaagagaaggaaa
taaatgtgtacaaggaggaaaagaagaacacgaggcatctctattttaat
atttatataattctttacatagagaccccaaatatgccacaaaaatcttt
aaagctaataaataagtccaaacaatgtggcaggatacaaaattaacaga
gaaatcagtggcctggctatatagcactgacaaacaaaatgaaaaagaca
taaggcaaataattttattcacaatacatacatgagcacatctcccacct
cccttggtcataacataagctagaaacctgcacaatgaaaattttaagat
gcttgaacaaataaaactgagaaatccactagaagattggaatggtcttc
tatgcttggtgaattaaaaaaaaaaatattgtggaaaagtggataattct
acaaaccacaatctatagattctatgtattttccagaaaaaattcaaccc
cattggtcactgagaatagacacattcaaaattgtatatggaagacccaa
aacactagaataggctcaagaaacagcccaaaatctgaacaaaaattaaa
ttagggcgaagctataccatacctgactgccaatttttctaaaggcctat
gtagcacgaagcc
gaattccctctgtttctcaatttagcattttgggttgctgaagagttcca
agcagagatctaggggtgaatctctcacacaataaaccacctgtggagag
gcaaaggacaggatcctggcttgtatgaaagtactgcagcctgaagtggt
aggcagagtggaagggaggaagcacagagatggaatggcgggagttaaaa
caaacacacacacacacacacacacacacacacacacacacacacacaca
gagagagagagagagagagagagagagagagagagagagagagagagaga
gagagatctttccttgcctctggcttgtgtcctgcctaggaaggcatgtt
cctggggtgctgtgtagctgaagaaccccctagttgagtctatttagaga
ataagcagttcctagatacagaagttttaatggtcaagtctagaacagta
gcacctaagggatttcagtctctctgccatgctgtagaggaacaggtttg
ctggggcttaaaggagacctgtgcagagattcagcaccagaaagcccaag
gatgttacagctagaaagacagacttggagaaaacagcagagagaaagac
atacagacaccacacacacacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70674079_70674705
seq2: B6Ng01-280I14.g_71_695 (reverse)

seq1  GTGTGTGTGTGTGTGGTGTCTGTATGTCTTTCTCTCTGCTGTTTTCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGGTGTCTGTATGTCTTTCTCTCTGCTGTTTTCTCCA  50

seq1  AGTCTGTCTTTCTAGCTGTAACATCCTTGGGCTTTCTGGTGCTGAATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTCTTTCTAGCTGTAACATCCTTGGGCTTTCTGGTGCTGAATCTC  100

seq1  TGCACAGGTCTCCTTTAAGCCCCAGCAAACCTGTTCCTCTACAGCATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGGTCTCCTTTAAGCCCCAGCAAACCTGTTCCTCTACAGCATGGC  150

seq1  AGAGAGACTGAAATCCCTTAGGTGCTACTGTTCTAGACTTGACCATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACTGAAATCCCTTAGGTGCTACTGTTCTAGACTTGACCATTAAA  200

seq1  ACTTCTGTATCTAGGAACTGCTTATTCTCTAAATAGACTCAACTAGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTATCTAGGAACTGCTTATTCTCTAAATAGACTCAACTAGGGGG  250

seq1  TTCTTCAGCTACACAGCACCCCAGGAACATGCCTTCCTAGGCAGGACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGCTACACAGCACCCCAGGAACATGCCTTCCTAGGCAGGACACA  300

seq1  AGCCAGAGGCAAGGAAAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  350
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  AGCCAGAGGCAAGGAAAGA--TCTCTCTCTCTCTCTCTCTCTCTCTCTCT  348

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGT  398

seq1  GTGTGTGTGTGTGTGTGTGTGTGTTTGTTTTAACTCCCGCCATTCCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTTTGTTTTAACTCCCGCCATTCCATCT  448

seq1  CTGTGCTTCCTCCCTTCCACTCTGCCTACCACTTCAGGCTGCAGTACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTTCCTCCCTTCCACTCTGCCTACCACTTCAGGCTGCAGTACTTT  498

seq1  CATACAAGCCAGGATCCTGTCCTTTGCCTCTCCACAGGTGGTTTATTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAGCCAGGATCCTGTCCTTTGCCTCTCCACAGGTGGTTTATTGTG  548

seq1  TGAGAGATTCACCCCTAGATCTCTGCTTGGAACTCTTCAGCAACCCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGATTCACCCCTAGATCTCTGCTTGGAACTCTTCAGCAACCCAAAA  598

seq1  TGCTAAATTGAGAAACAGAGGGAATTC  627
      |||||||||||||||||||||||||||
seq2  TGCTAAATTGAGAAACAGAGGGAATTC  625