BAC Information

Click to search

BAC

Clone NameB6Ng01-280K15
Chromosome7 (Build37)
Map Location 115,457,389 - 115,458,564
singlet/doubletsinglet
Overlap genenone
Upstream geneSyt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881
Downstream geneOlfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3, Lmo1, Stk33
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280K15.bB6Ng01-280K15.g
ACCGA080334GA080335
length1,1751,196
definitionB6Ng01-280K15.b B6Ng01-280K15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagaaaggaacaaacaaacaaacaagcaaacagatatttggtt
ggattaggctcacacttctatagtcattgttaatcgacacagatggatgt
tcaatccagagaaagaataaagggtcacagttactgatttaagtcaacca
gccagtggggcactcagagatctagactttcagtattcaatgaggaggaa
aagagagcactagagcatggctgttagtgcatataaatggcttaatcact
aatagaggaaatagcagagtctgtgccttctaattcccttagacttgtgg
taaaaattctctgaaatgttgaatgaaaaaaataatacatctcatcataa
cattgaataattaagagcctgtgaaaatgttatacctattaaaaagtaaa
tgttgtttaatcattgcatgtgatcaagtatctctagaaattttagacag
tatttttctaattttataaaacctttcttttaatttcacaacaaaattac
attgtgtggctaacaatcccacagaacaagtaaaggaactcagagccaaa
ttaaaataatgtggcatgtctagcatttgccttgtctgattccaacccac
agagtctgaaggcaacatgggtaggcacttggacaatcagaaggggagta
tgattccctctactgagctctgctgaggcaaaaggtagagtgggaatagc
tctattccttcagaccagtatctgtgttcaatatttgacaaagagaattt
caaaatctggaaagcataccacaggataaaggacaacaggggttgtagat
gcttaagtttagaaatagtaaggcagaagaggaaaatactatttttttac
tatttctggtaaatgttttgaaaaccttaagaactaccacaattctgctg
agaggaagttatgtatttatgagtgtggtaaatagggtcttgggtagaaa
ctagcatcattgaaacaaaattctgttttatattttcttctctcatacat
tacattcctacttcagttactctccctctggtcctccagtcagcttcacc
cttccctcatcaggctccttcttgtattctgctcaaaacagagagacaga
aatattctcgaatctttaaggatggaaattgtgaggagctatataatgcc
attatatgcaattcaattgtacctg

gaattctcacctgaggaatctcgaatggctgagaagcacctacagaaatg
ttcaatatccttagtcatcagggaaatgcaaatcaaaatgacctgggatt
tcaccgtacatcaatcagaaaggctaagataaaaaactcacttgatagca
gatgatattgagggtatggagaaagaggaacactcttccatttcgggtag
gattccaaactggtaaaaccactctagaaatcaatctgggggtttctcag
aaaattgaaaatagatctacctgaagtcccagctatatcactcttgggca
tatatccaaaagatgctccaccatgccacaagggcacaggttacaatatg
gtcataagagcgttatctgtgatagccagaagatggaaacaacccagatt
tcccacgatggatgaatgggtacagaagatgtggctcatttacacaatgg
aatactactaagctattaagaatgtggacatcatgagttttgcaggcaaa
tggatagaactagaaaatatcattctgggtgaggtaactcagacacaaaa
ggacatacttggcatgtactcactaataagtattagctaaaaaagtacag
aatacccagaatacaatccacagaacttgttgggagctattaagacaact
cttgatctctgaattgggcctctccccctgagaagaaaagggggtcaaaa
gcgggccaccgatgcaccgctctgagaacaaccacagattgttccaaccc
taagtcagcacccgatgtcctgacctcaagatgtaccctgataccgccaa
gttcctgcttcccagtgtagtcgccaaaagaaaaatttctgctgccccat
ccctcctgctgagaagtacttcctcttttccactgccccatcctcctgct
gaggtgcatttctgctgccccattcctcctgctgagaagtacttcccctt
ttgcttgtgcatttaaccttgggccttgctaatacattggggtcctggat
gcaatcagacttttctgtgtcgtattcgcaccaagaccctcatctctctc
tacccccaatttggttcttagggaagtcccctcgagaccctcgaataact
gaacctgctgaacggtcaagaacctcagaaggtatcagtcaattgtcaag
tgaggaatgttctcaatcccaccttgggaagggagaagccaattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_115457389_115458564
seq2: B6Ng01-280K15.b_46_1220

seq1  GAATTCAGAGAAAGGAACAAACAAACAAACAAGCAAACAGATATTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAAAGGAACAAACAAACAAACAAGCAAACAGATATTTGGTT  50

seq1  GGATTAGGCTCACACTTCTATAGTCATTGTTAATCGACACAGATGGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAGGCTCACACTTCTATAGTCATTGTTAATCGACACAGATGGATGT  100

seq1  TCAATCCAGAGAAAGAATAAAGGGTCACAGTTACTGATTTAAGTCAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCAGAGAAAGAATAAAGGGTCACAGTTACTGATTTAAGTCAACCA  150

seq1  GCCAGTGGGGCACTCAGAGATCTAGACTTTCAGTATTCAATGAGGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGGGGCACTCAGAGATCTAGACTTTCAGTATTCAATGAGGAGGAA  200

seq1  AAGAGAGCACTAGAGCATGGCTGTTAGTGCATATAAATGGCTTAATCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGCACTAGAGCATGGCTGTTAGTGCATATAAATGGCTTAATCACT  250

seq1  AATAGAGGAAATAGCAGAGTCTGTGCCTTCTAATTCCCTTAGACTTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGGAAATAGCAGAGTCTGTGCCTTCTAATTCCCTTAGACTTGTGG  300

seq1  TAAAAATTCTCTGAAATGTTGAATGAAAAAAATAATACATCTCATCATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTCTCTGAAATGTTGAATGAAAAAAATAATACATCTCATCATAA  350

seq1  CATTGAATAATTAAGAGCCTGTGAAAATGTTATACCTATTAAAAAGTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAATAATTAAGAGCCTGTGAAAATGTTATACCTATTAAAAAGTAAA  400

seq1  TGTTGTTTAATCATTGCATGTGATCAAGTATCTCTAGAAATTTTAGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTAATCATTGCATGTGATCAAGTATCTCTAGAAATTTTAGACAG  450

seq1  TATTTTTCTAATTTTATAAAACCTTTCTTTTAATTTCACAACAAAATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTAATTTTATAAAACCTTTCTTTTAATTTCACAACAAAATTAC  500

seq1  ATTGTGTGGCTAACAATCCCACAGAACAAGTAAAGGAACTCAGAGCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTGGCTAACAATCCCACAGAACAAGTAAAGGAACTCAGAGCCAAA  550

seq1  TTAAAATAATGTGGCATGTCTAGCATTTGCCTTGTCTGATTCCAACCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAATGTGGCATGTCTAGCATTTGCCTTGTCTGATTCCAACCCAC  600

seq1  AGAGTCTGAAGGCAACATGGGTAGGCACTTGGACAATCAGAAGGGGAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTGAAGGCAACATGGGTAGGCACTTGGACAATCAGAAGGGGAGTA  650

seq1  TGATTCCCTCTACTGAGCTCTGCTGAGGCAAAAGGTAGAGTGGGAATAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCCTCTACTGAGCTCTGCTGAGGCAAAAGGTAGAGTGGGAATAGC  700

seq1  TCTATTCCTTCAGACCAGTATCTGTGTTCAATATTTGACAAAGAGAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCTTCAGACCAGTATCTGTGTTCAATATTTGACAAAGAGAATTT  750

seq1  CAAAATCTGGAAAGCATACCACAGGATAAAGGACAACAGGGGTTGTAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCTGGAAAGCATACCACAGGATAAAGGACAACAGGGGTTGTAGAT  800

seq1  GCTTAAGTTTAGAAATAGTAAGGCAGAAGAGGAAAATACTATTTTTTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGTTTAGAAATAGTAAGGCAGAAGAGGAAAATACTATTTTTTTAC  850

seq1  TATTTCTGGTAAATGTTTTGAAAACCTTAAGAACTACCACAATTCTGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGGTAAATGTTTTGAAAACCTTAAGAACTACCACAATTCTGCTG  900

seq1  AGAGGAAGTTATGTATTTATGAGTGTGGTAAATAGGGTCTTGGGTAGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGTTATGTATTTATGAGTGTGGTAAATAGGGTCTTGGGTAGAAA  950

seq1  CTAGCATCATTGAAACAAAATTCTGTTTTATATTTTCTTCTCTCATACAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATCATTGAAACAAAATTCTGTTTTATATTTTCTTCTCTCATACAT  1000

seq1  TACATTCCTACTTCAGTTACTCCTCCCTCTGGTCCTCCCAGTCAGCTTCA  1050
      ||||||||||||||||||||| |||||||||||||| |||||||||||||
seq2  TACATTCCTACTTCAGTTACT-CTCCCTCTGGTCCT-CCAGTCAGCTTCA  1048

seq1  CCCCTTCCCTCCATCA-GCTCCTTC-TGTATTCTGCTTCAAAACAGAGAG  1098
       ||||||||| ||||| |||||||| |||||||||| |||||||||||||
seq2  -CCCTTCCCT-CATCAGGCTCCTTCTTGTATTCTGC-TCAAAACAGAGAG  1095

seq1  -CAGATA---TCTCGATTCTTTAAGGGATTGAAATTGTGAGGAAGCATAT  1144
       |||| |   |||||| ||||||| |||| |||||||||||||   ||||
seq2  ACAGAAATATTCTCGAATCTTTAA-GGATGGAAATTGTGAGGAGCTATAT  1144

seq1  ATAGCATTAATATGCATTTCAAAATGTACCTG  1176
      |  ||  | ||||||| ||| || ||||||||
seq2  AATGCCATTATATGCAATTC-AATTGTACCTG  1175


| Home | SequenceCutter | Blast | Download |