BAC Information

Click to search

BAC

Clone NameB6Ng01-282D23
Chromosome7 (Build37)
Map Location 151,936,361 - 152,100,812
singlet/doubletdoublet
Overlap geneLOC669079, LOC677315, Fgf3, Fgf4, Fgf15
Upstream geneMrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498, Shank2, Cttn, Ppfia1, Fadd, Tmem16a
Downstream geneOraov1, Ccnd1, 1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282D23.bB6Ng01-282D23.g
ACCGA081516GA081517
length1,1791,028
definitionB6Ng01-282D23.b B6Ng01-282D23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,936,361 - 151,937,543)(152,099,811 - 152,100,812)
sequence
gaattctccaaaggaagccaggcagcatcccagaaccacctgggagactc
ctagcaaacaacagacccctactgctatttcccaacacccagtgtggcta
ctgtgtccaacacccagtgtggctggttgagggcaacagggaggaagggg
ccttcagatagccgaagacctcaagacaggatacccctgaggttactcca
gattgtagattaaagatgtccttgcccagtgtgagtggcccctccccaag
tctggacttgtggacacttgcagaccagcacttacttcacttctctgggc
accagctttactttaggactgacagctccaggctctcccatctgcccttg
gaagtgggggcttggtttcaggggtatgccagccttggcccagagagtct
gtgggaaacagtaacctcccagcacaggcctcacttagagaagtcttccc
tctgccctgtgggaggagacggctcagccagagtaccagatgttggtctg
ttgcttatctggccaccactcacgtcctcataagtggaggagtgaagacc
ttcatttatacatcaatcattggtccagggtgggcctgagagccatgcag
cagccaggaattaggtgggcactagtgggtcactatcagggcaccagcac
aacaccagtcaagtgtggcagctggcttcccaggagacagaggtagggag
cttggctctgaggtcccatcccaccccatggaaggaccctagagtccaaa
aatcagaagggtaccaatctcaagaagccaagcagcagacagggcagtga
tctacccacagctaaagggagggacaggtccccacctctgagttctgttc
tccattatcacatctcctgacaggagtctcaagatagagacacaaatgcc
atgcaagccagtctacctactgtgtgtcctcagaccagtaacttaacttc
tctggggccttgtctttactactaataaagccatatcaccagtttagagc
tagtgagccctgttccagtagccattggatggtttattctgtcccttctg
ttagctggttcccagagtgggtaccacttgagctcatgtctcagtggatt
gtcaagttcacagagaagtagagaacatacttctgagtgaacttagctgc
tacatagggaaccagctctgaggcagagg
gaattcacaaacgtgggtcttaaagaaatgagaaaagttaccaaagatct
ggcacaggggcgttcccaggaaatggaggaagggcccaaggggcaggctt
caaggagggaggagtatccggcatcctctgctgtcaccggactgtcaatc
accgcatctgtacactgcaccggaccctccctgagggctggaaacgattt
gatactgcgatatcctaaagggcagataataaatattgcccccagacatg
aaaatgcccttgggggggggtctttgaaaatgaaaaaggttgtgtgtgcc
agttaccttgtttttttttggtctttttgttattttgtcttttttttttt
ttttttttttttccagagctgaggaccgaacccagggccttgcgcttgct
aggcaagcgctctaccactgagctaaatccccaaccccgaacgctagcac
ttgctgccagtatttaaagcaaaactgaagtatttcatacacagtcaagt
atcaggtggttccgaagggctggccggcaggaggagccactttgtccaag
cgctccaatctcacaggcacccactcttcaaacagcaaaaattgaagtta
gttttctcatcatttccatcagagataccttccaaagtatagttttaaag
agtattccacagtacagtaagttccttaggcaacaattgctaacaagtta
atcagctcctgtataaaagagaccagagatacaacactgtaattgatggg
agggctgaataagtaaaacacgccacttgaaactgaatttccatctgtgc
aaatgaattccttaactataacaaaaatgcctttttgaaaatggagaact
actgtgtcaaaacaaaaaaaaaaaagtttgagtctgggtgataaacatga
tgggaatgttgacctgaagaaaaaaaataacccgggaaaaaagcccaaaa
aggtctctctaagaagtaaaaactctccgtgaataaaaaataaaaactcc
caaccttccgggaagggatagagcagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151936361_151937543
seq2: B6Ng01-282D23.b_47_1225

seq1  GAATTCTCCAAAGGAAGCCAGGCAGCATCCCAGAACCACCTGGGAGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAAGGAAGCCAGGCAGCATCCCAGAACCACCTGGGAGACTC  50

seq1  CTAGCAAACAACAGACCCCTACTGCTATTTCCCAACACCCAGTGTGGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAACAACAGACCCCTACTGCTATTTCCCAACACCCAGTGTGGCTA  100

seq1  CTGTGTCCAACACCCAGTGTGGCTGGTTGAGGGCAACAGGGAGGAAGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCAACACCCAGTGTGGCTGGTTGAGGGCAACAGGGAGGAAGGGG  150

seq1  CCTTCAGATAGCCGAAGACCTCAAGACAGGATACCCCTGAGGTTACTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGATAGCCGAAGACCTCAAGACAGGATACCCCTGAGGTTACTCCA  200

seq1  GATTGTAGATTAAAGATGTCCTTGCCCAGTGTGAGTGGCCCCTCCCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTAGATTAAAGATGTCCTTGCCCAGTGTGAGTGGCCCCTCCCCAAG  250

seq1  TCTGGACTTGTGGACACTTGCAGACCAGCACTTACTTCACTTCTCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACTTGTGGACACTTGCAGACCAGCACTTACTTCACTTCTCTGGGC  300

seq1  ACCAGCTTTACTTTAGGACTGACAGCTCCAGGCTCTCCCATCTGCCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTTTACTTTAGGACTGACAGCTCCAGGCTCTCCCATCTGCCCTTG  350

seq1  GAAGTGGGGGCTTGGTTTCAGGGGTATGCCAGCCTTGGCCCAGAGAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGGGGCTTGGTTTCAGGGGTATGCCAGCCTTGGCCCAGAGAGTCT  400

seq1  GTGGGAAACAGTAACCTCCCAGCACAGGCCTCACTTAGAGAAGTCTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAACAGTAACCTCCCAGCACAGGCCTCACTTAGAGAAGTCTTCCC  450

seq1  TCTGCCCTGTGGGAGGAGACGGCTCAGCCAGAGTACCAGATGTTGGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCTGTGGGAGGAGACGGCTCAGCCAGAGTACCAGATGTTGGTCTG  500

seq1  TTGCTTATCTGGCCACCACTCACGTCCTCATAAGTGGAGGAGTGAAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTATCTGGCCACCACTCACGTCCTCATAAGTGGAGGAGTGAAGACC  550

seq1  TTCATTTATACATCAATCATTGGTCCAGGGTGGGCCTGAGAGCCATGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTATACATCAATCATTGGTCCAGGGTGGGCCTGAGAGCCATGCAG  600

seq1  CAGCCAGGAATTAGGTGGGCACTAGTGGGTCACTATCAGGGCACCAGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGAATTAGGTGGGCACTAGTGGGTCACTATCAGGGCACCAGCAC  650

seq1  AACACCAGTCAAGTGTGGCAGCTGGCTTCCCAGGAGACAGAGGTAGGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCAGTCAAGTGTGGCAGCTGGCTTCCCAGGAGACAGAGGTAGGGAG  700

seq1  CTTGGCTCTGAGGTCCCATCCCACCCCATGGAAGGACCCTAGAGTCCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCTGAGGTCCCATCCCACCCCATGGAAGGACCCTAGAGTCCAAA  750

seq1  AATCAGAAGGGTACCAATCTCAAGAAGCCAAGCAGCAGACAGGGCAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAAGGGTACCAATCTCAAGAAGCCAAGCAGCAGACAGGGCAGTGA  800

seq1  TCTACCCACAGCTAAAGGGAGGGACAGGTCCCCACCTCTGAGTTCTGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCACAGCTAAAGGGAGGGACAGGTCCCCACCTCTGAGTTCTGTTC  850

seq1  TCCATTATCACATCTCCTGACAGGAGTCTCAAGATAGAGACACAAATGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATCACATCTCCTGACAGGAGTCTCAAGATAGAGACACAAATGCC  900

seq1  ATGCAAGCCAGTCTACCTACTGTGTGTCCTCAGACCAGTAACTTAACTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGCCAGTCTACCTACTGTGTGTCCTCAGACCAGTAACTTAACTTC  950

seq1  TCT-GGGCCTTGTCTTTACTACTAATAAAGCCATATCACCAGTTTTAGGA  999
      ||| |||||||||||||||||||||||||||||||||||||||||   ||
seq2  TCTGGGGCCTTGTCTTTACTACTAATAAAGCCATATCACCAGTTT--AGA  998

seq1  GCTAGTGAGCCCTGTTCCAGTAGCCATTGGATGGTTTATTCTTGTCCCTT  1049
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCTAGTGAGCCCTGTTCCAGTAGCCATTGGATGGTTTATTC-TGTCCCTT  1047

seq1  CTGTAGCCTGGGTTCCCAGAGTGGGTACCACTTGAGCCCATGTCTCAGTG  1099
      ||||   || ||||||||||||||||||||||||||| ||||||||||||
seq2  CTGTTAGCT-GGTTCCCAGAGTGGGTACCACTTGAGCTCATGTCTCAGTG  1096

seq1  GATTGCCAAG-TCACAGAGAAGTAGAGACCATAC-TCTGAGTG-ACTTAG  1146
      ||||| |||| ||||||||||||||||| ||||| |||||||| ||||||
seq2  GATTGTCAAGTTCACAGAGAAGTAGAGAACATACTTCTGAGTGAACTTAG  1146

seq1  CTGCTACACAAGGGAGACCAGCTCTGAAGGGCAGAGG  1183
      ||||||||  ||||| |||||||||||  ||||||||
seq2  CTGCTACA-TAGGGA-ACCAGCTCTGA--GGCAGAGG  1179

seq1: chr7_152099811_152100812
seq2: B6Ng01-282D23.g_69_1096 (reverse)

seq1  CACTGCTCTATCC--TTCCTGAAGTTTGTGA--TTTTATTTTT--ATCAC  44
      |||||||||||||  | || |||| ||| ||  ||||||||||   ||||
seq2  CACTGCTCTATCCCTTCCCGGAAGGTTGGGAGTTTTTATTTTTTATTCAC  50

seq1  GGA-AG-TTTTACTCCTAGGAGA---CATTCTAGGCTGTTCTCCAGGCTT  89
      ||| || ||||||| ||  ||||   | || | |||| || ||| || ||
seq2  GGAGAGTTTTTACTTCTTAGAGAGACCTTTTTGGGCTTTTTTCCCGGGTT  100

seq1  A--TCTCTTCTTCA-GTCAACA-TGCCATCATGTTCATCA-CCAGACTCA  134
      |  | | ||||||| ||||||| | |||||||||| |||| |||||||||
seq2  ATTTTTTTTCTTCAGGTCAACATTCCCATCATGTTTATCACCCAGACTCA  150

seq1  AACTTCTCTCTTCT--GTCTGACACAGTAGTTCT-CATTTTCAAAAA-GC  180
      ||||| | | || |   | ||||||||||||||| |||||||||||| ||
seq2  AACTTTTTTTTTTTTGTTTTGACACAGTAGTTCTCCATTTTCAAAAAGGC  200

seq1  A-TTTTGTTATAGTTAAGG-ATTCATTTGCACAGAT-GAAATTCAG-TTC  226
      | ||||||||||||||||| |||||||||||||||| ||||||||| |||
seq2  ATTTTTGTTATAGTTAAGGAATTCATTTGCACAGATGGAAATTCAGTTTC  250

seq1  AAGTGGCGTG-TTTACTTATTCAGCCCT-CCATCAATTACAGTGTTGTAT  274
      |||||||||| ||||||||||||||||| |||||||||||||||||||||
seq2  AAGTGGCGTGTTTTACTTATTCAGCCCTCCCATCAATTACAGTGTTGTAT  300

seq1  CTCTGGTCTCTTTTATACAGGAGCTGATTAACTTGTTAGCAATTGTTGCC  324
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTCTCTTTTATACAGGAGCTGATTAACTTGTTAGCAATTGTTGCC  350

seq1  TAAGGAACTTACTGTACTGTGGAATACTCTTTAAAACTATACTTTGGAAG  374
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAACTTACTGTACTGTGGAATACTCTTTAAAACTATACTTTGGAAG  400

seq1  GTATCTCTGATGGAAATGATGAGAAAACTAACTTCAATTTCTGCTGTTTG  424
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTATCTCTGATGGAAATGATGAGAAAACTAACTTCAATTTTTGCTGTTTG  450

seq1  AAGAGTGGGTGCCTGTGAGATTGGAGCGCTTGGACAAAGTGGCTCCTCCT  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGGGTGCCTGTGAGATTGGAGCGCTTGGACAAAGTGGCTCCTCCT  500

seq1  GCCGGCCAGCCCTTCGGAACCACCTGATACTTGACTGTGTATGAAATACT  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCCAGCCCTTCGGAACCACCTGATACTTGACTGTGTATGAAATACT  550

seq1  TCAGTTTTGCTTTAAATACTGGCAGCAAGTGCTAGCGTTCGGGGTTGGGG  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTGCTTTAAATACTGGCAGCAAGTGCTAGCGTTCGGGGTTGGGG  600

seq1  ATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCTGGGTT  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCTGGGTT  650

seq1  CGGTCCTCAGCTCTGGAAAAAAAAAAAAAAAAAAAAAAAGACAAAATAAC  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCCTCAGCTCTGGAAAAAAAAAAAAAAAAAAAAAAAGACAAAATAAC  700

seq1  AAAAAGACCAAAAAAAAACAAGGTAACTGGCACACACAACCTTTTTCATT  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACCAAAAAAAAACAAGGTAACTGGCACACACAACCTTTTTCATT  750

seq1  TTCAAAGACCCCCCCCCAAGGGCATTTTCATGTCTGGGGGCAATATTTAT  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGACCCCCCCCCAAGGGCATTTTCATGTCTGGGGGCAATATTTAT  800

seq1  TATCTGCCCTTTAGGATATCGCAGTATCAAATCGTTTCCAGCCCTCAGGG  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCCCTTTAGGATATCGCAGTATCAAATCGTTTCCAGCCCTCAGGG  850

seq1  AGGGTCCGGTGCAGTGTACAGATGCGGTGATTGACAGTCCGGTGACAGCA  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCGGTGCAGTGTACAGATGCGGTGATTGACAGTCCGGTGACAGCA  900

seq1  GAGGATGCCGGATACTCCTCCCTCCTTGAAGCCTGCCCCTTGGGCCCTTC  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGCCGGATACTCCTCCCTCCTTGAAGCCTGCCCCTTGGGCCCTTC  950

seq1  CTCCATTTCCTGGGAACGCCCCTGTGCCAGATCTTTGGTAACTTTTCTCA  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTCCTGGGAACGCCCCTGTGCCAGATCTTTGGTAACTTTTCTCA  1000

seq1  TTTCTTTAAGACCCACGTTTGTGAATTC  1002
      ||||||||||||||||||||||||||||
seq2  TTTCTTTAAGACCCACGTTTGTGAATTC  1028