BAC Information

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BAC

Clone NameB6Ng01-282P21
Chromosome7 (Build37)
Map Location 104,324,609 - 104,434,781
singlet/doubletdoublet
Overlap geneGab2, LOC100040457
Upstream geneEG666836, Odz4, LOC670727, LOC666858, Nars2
Downstream geneUsp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282P21.bB6Ng01-282P21.g
ACCGA082064GA082065
length1,046925
definitionB6Ng01-282P21.b B6Ng01-282P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,433,731 - 104,434,781)(104,324,609 - 104,325,524)
sequence
gaattcaacttatattcaactgtgtgtgcatctacatattagtgtatttt
cttggactcacacttcagtgagtgactgtacttatctctttaccaatgca
gtatcctataggttaccagagtttggcaggaagtcttgaaaccaggtagt
ttaaatgcttcattgttgtccttttagaagattaatatggagtgtttaaa
tttttttcatttttacacatattttagaaccaatctaacagtatctatat
aaaagcttgttagaagttttattgtagtgaacctatagatcattctgaag
aactgtcattttactaatatttgagtttttaattcataactatagtatgt
ttcttttcttatttaggcctctcatttctctcactaatgtcttcacaatt
cagaacacaagaaacaagaaaaagtaaggctatcgtgttcctccaaatca
taattctttaattaccaagaccaaagagtcaaatgggtaaaatgccagat
gaagaatacaaacattttcctgtaaaaatagtcagtgacttcaaaatgat
acaaataagcaaatgcatgaagtaaggaaatcagttcaagatctagagac
ttagcaggaaatatagactggagcaggaagggtaaatgaatataccagtc
agtaacaagcatcagcaagaaactttaccaagaagaagagagagaaatca
aagatggaggacatgatcaaagaaatacaatactcagaattaatatagga
taaataaatacacaaatgagtaaaatccaagaattctgagatgcgatcaa
gagatcaagtcaaagactccatgggggaagctgaagaaaaacttaggtat
agaaaacctatttaatgaaattatagctgaaaaatttgcaaatttataga
aagaaatatacatttaagcatgagacacttaaagtcctaaatagatcttt
gcagagaagaaatttccctagtgcatcatagtcatgatgcaaaatatgca
aaacaagaaaacactatatagctatatagaagcaccactcagaaaa
gaattcctcttatagatctgatctctatatattgtttccttctttaagga
aatccatataaatatttaaataaatcctcctagaagaggggtggtagtat
gcttcttaaataccagcactagagtagaaaggtcaggagttcaagattat
cctacatatcaaatctgtcattatgggattactttagcttctcatttgaa
tgatatttacttctggaatcaagttgtgatacaattctaaatgagacgct
tatgtgacaatgaggctataacactcgtcttccataaaaagtaataaata
agttatttcaatactgatacggaataacctccatgacttatttaaatgaa
aaaagtaagatgcatgtaacatacaatgggaaacatgatatatgcttact
atcatatgcataaaatatctcaaaatgaaacacaggaaactggtggcagt
gattatctctacaaaacagaaaagaattctggggttaaagtcagggaaac
ttgttaatattttctattctatacaactcgttgttgttattgttattgtt
gttgtttttgagacaagttctgactatgtaacctaggctagccttgaatc
caaaattctggtcttatcctccatggttctgggattacaaaactgcaccc
acatgctgttgtttatttctattaattgtgttttttaagatttgttttta
ttttttaagtgtgtgtgtgtgtgtgggcaagtgggaggccttggtgcctc
tggagtgaaaaattacagacagctgtgagcttcccaacatggggtgctag
gaactacaacccaggtctctgtcaaagaaaacagtatatacttttaattt
ccaggcaatctaagtcctttcatcacccccactattgattcttaaaatat
ttccttataaaaccgattttatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_104433731_104434781
seq2: B6Ng01-282P21.b_45_1090 (reverse)

seq1  TTTTCTGAGTTGGTGCTTTCTTATATAGCTATTAATAGTGTTTTCTTTGT  50
      ||||||||| ||||||||   |||||||||||  ||||||||||| ||||
seq2  TTTTCTGAG-TGGTGCTT--CTATATAGCTAT--ATAGTGTTTTC-TTGT  44

seq1  TTTGCATATTTTGCATCATGACTATGATGCACTAGGGAAATTTCTTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATATTTTGCATCATGACTATGATGCACTAGGGAAATTTCTTCTCT  94

seq1  GCAAAGATCTATTTAGGACTTTAAGTGTCTCATGCTTAAATGTATATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGATCTATTTAGGACTTTAAGTGTCTCATGCTTAAATGTATATTTC  144

seq1  TTTCTATAAATTTGCAAATTTTTCAGCTATAATTTCATTAAATAGGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATAAATTTGCAAATTTTTCAGCTATAATTTCATTAAATAGGTTTT  194

seq1  CTATACCTAAGTTTTTCTTCAGCTT-CCCCATGGAGTCTTTGACTTGATC  249
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTATACCTAAGTTTTTCTTCAGCTTCCCCCATGGAGTCTTTGACTTGATC  244

seq1  TCTTGATCGCATCTCAGAATTCTTGGATTTTACTCATTTGTGTATTTATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATCGCATCTCAGAATTCTTGGATTTTACTCATTTGTGTATTTATT  294

seq1  TATCCTATATTAATTCTGAGTATTGTATTTCTTTGATCATGTCCTCCATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTATATTAATTCTGAGTATTGTATTTCTTTGATCATGTCCTCCATC  344

seq1  TTTGATTTCTCTCTCTTCTTCTTGGTAAAGTTTCTTGCTGATGCTTGTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTCTCTCTCTTCTTCTTGGTAAAGTTTCTTGCTGATGCTTGTTA  394

seq1  CTGACTGGTATATTCATTTACCCTTCCTGCTCCAGTCTATATTTCCTGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGGTATATTCATTTACCCTTCCTGCTCCAGTCTATATTTCCTGCT  444

seq1  AAGTCTCTAGATCTTGAACTGATTTCCTTACTTCATGCATTTGCTTATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTAGATCTTGAACTGATTTCCTTACTTCATGCATTTGCTTATTT  494

seq1  GTATCATTTTGAAGTCACTGACTATTTTTACAGGAAAATGTTTGTATTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATTTTGAAGTCACTGACTATTTTTACAGGAAAATGTTTGTATTCT  544

seq1  TCATCTGGCATTTTACCCATTTGACTCTTTGGTCTTGGTAATTAAAGAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGGCATTTTACCCATTTGACTCTTTGGTCTTGGTAATTAAAGAAT  594

seq1  TATGATTTGGAGGAACACGATAGCCTTACTTTTTCTTGTTTCTTGTGTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTGGAGGAACACGATAGCCTTACTTTTTCTTGTTTCTTGTGTTC  644

seq1  TGAATTGTGAAGACATTAGTGAGAGAAATGAGAGGCCTAAATAAGAAAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGTGAAGACATTAGTGAGAGAAATGAGAGGCCTAAATAAGAAAAG  694

seq1  AAACATACTATAGTTATGAATTAAAAACTCAAATATTAGTAAAATGACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATACTATAGTTATGAATTAAAAACTCAAATATTAGTAAAATGACAG  744

seq1  TTCTTCAGAATGATCTATAGGTTCACTACAATAAAACTTCTAACAAGCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGAATGATCTATAGGTTCACTACAATAAAACTTCTAACAAGCTT  794

seq1  TTATATAGATACTGTTAGATTGGTTCTAAAATATGTGTAAAAATGAAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGATACTGTTAGATTGGTTCTAAAATATGTGTAAAAATGAAAAA  844

seq1  AATTTAAACACTCCATATTAATCTTCTAAAAGGACAACAATGAAGCATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAACACTCCATATTAATCTTCTAAAAGGACAACAATGAAGCATTT  894

seq1  AAACTACCTGGTTTCAAGACTTCCTGCCAAACTCTGGTAACCTATAGGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACCTGGTTTCAAGACTTCCTGCCAAACTCTGGTAACCTATAGGAT  944

seq1  ACTGCATTGGTAAAGAGATAAGTACAGTCACTCACTGAAGTGTGAGTCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATTGGTAAAGAGATAAGTACAGTCACTCACTGAAGTGTGAGTCCA  994

seq1  AGAAAATACACTAATATGTAGATGCACACACAGTTGAATATAAGTTGAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATACACTAATATGTAGATGCACACACAGTTGAATATAAGTTGAAT  1044

seq1  TC  1051
      ||
seq2  TC  1046

seq1: chr7_104324609_104325524
seq2: B6Ng01-282P21.g_68_991

seq1  GAATTCCTCTTATAGATCTGATCTCTATATATTGTTTCCTTCTTTAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTATAGATCTGATCTCTATATATTGTTTCCTTCTTTAAGGA  50

seq1  AATCCATATAAATATTTAAATAAATCCTCCTAGAAGAGGGGTGGTAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATATAAATATTTAAATAAATCCTCCTAGAAGAGGGGTGGTAGTAT  100

seq1  GCTTCTTAAATACCAGCACTAGAGTAGAAAGGTCAGGAGTTCAAGATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTAAATACCAGCACTAGAGTAGAAAGGTCAGGAGTTCAAGATTAT  150

seq1  CCTACATATCAAATCTGTCATTATGGGATTACTTTAGCTTCTCATTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATATCAAATCTGTCATTATGGGATTACTTTAGCTTCTCATTTGAA  200

seq1  TGATATTTACTTCTGGAATCAAGTTGTGATACAATTCTAAATGAGACGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTACTTCTGGAATCAAGTTGTGATACAATTCTAAATGAGACGCT  250

seq1  TATGTGACAATGAGGCTATAACACTCGTCTTCCATAAAAAGTAATAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGACAATGAGGCTATAACACTCGTCTTCCATAAAAAGTAATAAATA  300

seq1  AGTTATTTCAATACTGATACGGAATAACCTCCATGACTTATTTAAATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTTCAATACTGATACGGAATAACCTCCATGACTTATTTAAATGAA  350

seq1  AAAAGTAAGATGCATGTAACATACAATGGGAAACATGATATATGCTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAGATGCATGTAACATACAATGGGAAACATGATATATGCTTACT  400

seq1  ATCATATGCATAAAATATCTCAAAATGAAACACAGGAAACTGGTGGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATGCATAAAATATCTCAAAATGAAACACAGGAAACTGGTGGCAGT  450

seq1  GATTATCTCTACAAAACAGAAAAGAATTCTGGGGTTAAAGTCAGGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCTCTACAAAACAGAAAAGAATTCTGGGGTTAAAGTCAGGGAAAC  500

seq1  TTGTTAATATTTTCTATTCTATACAACTCGTTGTTGTTATTGTTATTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATATTTTCTATTCTATACAACTCGTTGTTGTTATTGTTATTGTT  550

seq1  GTTGTTTTTGAGACAAGTTCTGACTATGTAACCTAGGCTAGCCTTGAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTTGAGACAAGTTCTGACTATGTAACCTAGGCTAGCCTTGAATC  600

seq1  CAAAATTCTGGTCTTATCCTCCATGGTTCTGGGATTACAAAACTGCACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCTGGTCTTATCCTCCATGGTTCTGGGATTACAAAACTGCACCC  650

seq1  ACATGCTGTTGTTTATTTCTATTAATTGTGTTTTTTAAGATTTGTTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGTTGTTTATTTCTATTAATTGTGTTTTTTAAGATTTGTTTTTA  700

seq1  TTTTTTAAGTGTGTGTGTGTGTGT-GGCAAGTGGGAGGCCTTGGTGCCTC  749
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTTTTTAAGTGTGTGTGTGTGTGTGGGCAAGTGGGAGGCCTTGGTGCCTC  750

seq1  TGGAGTG-AAAATTACAGACAGCTGTGAGCTTCCCAACAT-GGGTGCTAG  797
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  TGGAGTGAAAAATTACAGACAGCTGTGAGCTTCCCAACATGGGGTGCTAG  800

seq1  GAACTAC-ACCCAGGTCTCTG-CAAAG-AAACAGTATATACTTTTAATTT  844
      ||||||| ||||||||||||| ||||| ||||||||||||||||||||||
seq2  GAACTACAACCCAGGTCTCTGTCAAAGAAAACAGTATATACTTTTAATTT  850

seq1  CTAGGCCATCTA--TCC-TTCATCACCCCCACTATTGATTCTTAAAATTA  891
      | |||| |||||  ||| ||||||||||||||||||||||||||||| ||
seq2  CCAGGCAATCTAAGTCCTTTCATCACCCCCACTATTGATTCTTAAAA-TA  899

seq1  TTTCCTTATAAAACAGTATTTATGA  916
      |||||||||||||| |  |||||||
seq2  TTTCCTTATAAAACCGATTTTATGA  924