BAC Information

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BAC

Clone NameB6Ng01-283P16
Chromosome7 (Build37)
Map Location 76,394,978 - 76,479,083
singlet/doubletdoublet
Overlap genenone
Upstream geneC330024D12Rik, EG434197, LOC100041800, EG384639, Arrdc4, LOC384741
Downstream geneEG665410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283P16.bB6Ng01-283P16.g
ACCGA082798GA082799
length1,1551,141
definitionB6Ng01-283P16.b B6Ng01-283P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,477,926 - 76,479,083)(76,394,978 - 76,396,104)
sequence
gaattctgtctcatactagttcctacaaatgcctaatgtgttgtcaatag
tgttgatcaccatacagaaattgcagtatgtgaatgaacacattcgtttg
tgcattagcacattacatttctttaggcagaaatcgttcctcaggatctg
gcgacatctgagcagagctagtctgacttaggataagaattggctccatg
ttgtcgggatttgagttttgtaagctcctttactttcatagatacaaaga
taaaaaccagtctggttggtaactgaagactgaatgaaataacacagatg
ccatcattccaatcaatatacataaagttaatgcttaggtctctcactct
tgctctcttgattaccctcactattaatatacttaatcggcattgcagaa
agaaaatattgtgatatagaaaacctgaaatgataattgtttaaaacttg
gaatccctactactctagacacattacttaactttttgatcttttctgat
tctcattctctgatgatgttcccatatttctggggatgtattagatatga
actttacaatgatgggacatgctccatgttcctaatgggaaaacacaaag
ttgactgcaatttgcttcttctgtaagggcaagaatatagagattgtatt
tctatcttacttgttggtgtgctagttaagtagtaaaatacttttaaaat
tgatattcatctgagaaagttcaaatcaatgggatcagatgttagacgac
cttttacactggttcttttggaagttgtagtgaatggaagttcatgaaaa
cagagacctgatctgcctttcattcgctgtgatccagaattctttgattt
ctgactttcttgccacaaattgcaccatctgttttttctctttcctatgt
gttgccaccaggtctcattctactgagaataatttgacctgcaatgaacc
taattcctctcacatcatttaaattcaaatttccaagaatgaaaatcaga
ttaacaacacccttggcttttgaaagaagagttgtaatgttttggatctt
tatatatatgattgtctgcagtagcaataagtgaactagcctgtggtctt
ggccattgcaaggtctgtctagaagatcttgtctagaatagcattaacat
atttt

gaattccaaaccccagacaacttcgagtccaggcaaaccaaggaaattta
ctaccctatagcccactttctgcttttattatctacttacacacctatta
tctatttatcattttgtctatcatccatctaatcttttatgatgcatgga
aatgattgaattaacatttctgaacatttttatatttctaccaaattcat
tttaatgagggctggagagattgctcagtggttaagaacattggctactc
ttgaacaagacacaggcttggttcccattacacacatgatggtttataac
catctttagctccagttctctatatttaccaagcaccaacatgataccga
tatgtacatgcaggcaaaaataaaataaatgaatctttaaaagcatcttt
aacagatttagagtcaacaatattgaatgatatatagatcattcatctgg
gaaaaaaaagactgtaaaaaccgttcttgaaattaccttaccttattttg
gagttctgagatggtactgggatgggtgatgatcaggttacagcagcacc
tagtgtagaatggtgctgctgctcacctgcccctagaaccctgtagatgg
agccctcagccaattggtaggatctctccacacagattgagttcctttgg
gttgattatgattgattatggtagtttcttcattactttaaacctaatca
gtgcttagagtaatttgagtaatgattgctcattattggcaattgtgaag
tttaagtctttccctgttttgcttcataggcagccagttgagaaacactt
gggaaacattcttgtttcacacacattttccaagcaaaagtgtgaataaa
tgattcaaagagtctggatggacaggaaatcatggatgattttttcagaa
gttatatttacatgtctttttggcatgaaagaaatggtagttcccccaga
tcaaatgttgaataaatcaaagatagttcttactgggattttgaaaagcc
ggtttcagcttttacaggaaatcccagtcaataaatcatgctatttcata
tcattatggtattcacctctggccttataatgagattcatatgactcctc
caacccatttgctattgttccaaaaggaatattaatgatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76477926_76479083
seq2: B6Ng01-283P16.b_51_1205 (reverse)

seq1  AAAATATGTT-ATGCTATTCTAGACAAAGATTTTTCTGGGACAGACTTTC  49
      |||||||||| |||||||||||||| |||| | ||||  ||||||| || 
seq2  AAAATATGTTAATGCTATTCTAGAC-AAGA-TCTTCT-AGACAGACCTTG  47

seq1  CA--TGCAAAGACCACAGCTTAGGTCACTTATTGCTACTGCAAGACAATC  97
      ||   || ||||||||||  ||| ||||||||||||||||| ||||||||
seq2  CAATGGCCAAGACCACAGGCTAGTTCACTTATTGCTACTGC-AGACAATC  96

seq1  A-ATATAATATTAAAGATCCAAAACATTTACAACTCTTCTTTCAAAAGCC  146
      | |||||    ||||||||||||||| |||||||||||||||||||||||
seq2  ATATATA----TAAAGATCCAAAACA-TTACAACTCTTCTTTCAAAAGCC  141

seq1  AAGGGTGTTGTTAATCTGATTTTCATTCTTGGAAATTTGAA-TTAAATGA  195
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGGGTGTTGTTAATCTGATTTTCATTCTTGGAAATTTGAATTTAAATGA  191

seq1  TGTGAGAGGAATTAGGTTCATTGCAGGTC-AATTATTCTCAGTAGAATGA  244
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGTGAGAGGAATTAGGTTCATTGCAGGTCAAATTATTCTCAGTAGAATGA  241

seq1  GACCTGGTGGCAACACATAGGAAAGAGAAAAAACAGATGGTGCAATTTGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGTGGCAACACATAGGAAAGAGAAAAAACAGATGGTGCAATTTGT  291

seq1  GGCAAGAAAGTCAGAAATCAAAGAATTCTGGATCACAGCGAATGAAAGGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAAAGTCAGAAATCAAAGAATTCTGGATCACAGCGAATGAAAGGC  341

seq1  AGATCAGGTCTCTGTTTTCATGAACTTCCATTCACTACAACTTCCAAAAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGTCTCTGTTTTCATGAACTTCCATTCACTACAACTTCCAAAAG  391

seq1  AACCAGTGTAAAAGGTCGTCTAACATCTGATCCCATTGATTTGAACTTTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTGTAAAAGGTCGTCTAACATCTGATCCCATTGATTTGAACTTTC  441

seq1  TCAGATGAATATCAATTTTAAAAGTATTTTACTACTTAACTAGCACACCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGAATATCAATTTTAAAAGTATTTTACTACTTAACTAGCACACCA  491

seq1  ACAAGTAAGATAGAAATACAATCTCTATATTCTTGCCCTTACAGAAGAAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAAGATAGAAATACAATCTCTATATTCTTGCCCTTACAGAAGAAG  541

seq1  CAAATTGCAGTCAACTTTGTGTTTTCCCATTAGGAACATGGAGCATGTCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGCAGTCAACTTTGTGTTTTCCCATTAGGAACATGGAGCATGTCC  591

seq1  CATCATTGTAAAGTTCATATCTAATACATCCCCAGAAATATGGGAACATC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTGTAAAGTTCATATCTAATACATCCCCAGAAATATGGGAACATC  641

seq1  ATCAGAGAATGAGAATCAGAAAAGATCAAAAAGTTAAGTAATGTGTCTAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGAATGAGAATCAGAAAAGATCAAAAAGTTAAGTAATGTGTCTAG  691

seq1  AGTAGTAGGGATTCCAAGTTTTAAACAATTATCATTTCAGGTTTTCTATA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAGGGATTCCAAGTTTTAAACAATTATCATTTCAGGTTTTCTATA  741

seq1  TCACAATATTTTCTTTCTGCAATGCCGATTAAGTATATTAATAGTGAGGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATATTTTCTTTCTGCAATGCCGATTAAGTATATTAATAGTGAGGG  791

seq1  TAATCAAGAGAGCAAGAGTGAGAGACCTAAGCATTAACTTTATGTATATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAGAGAGCAAGAGTGAGAGACCTAAGCATTAACTTTATGTATATT  841

seq1  GATTGGAATGATGGCATCTGTGTTATTTCATTCAGTCTTCAGTTACCAAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGAATGATGGCATCTGTGTTATTTCATTCAGTCTTCAGTTACCAAC  891

seq1  CAGACTGGTTTTTATCTTTGTATCTATGAAAGTAAAGGAGCTTACAAAAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGGTTTTTATCTTTGTATCTATGAAAGTAAAGGAGCTTACAAAAC  941

seq1  TCAAATCCCGACAACATGGAGCCAATTCTTATCCTAAGTCAGACTAGCTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCCCGACAACATGGAGCCAATTCTTATCCTAAGTCAGACTAGCTC  991

seq1  TGCTCAGATGTCGCCAGATCCTGAGGAACGATTTCTGCCTAAAGAAATGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGATGTCGCCAGATCCTGAGGAACGATTTCTGCCTAAAGAAATGT  1041

seq1  AATGTGCTAATGCACAAACGAATGTGTTCATTCACATACTGCAATTTCTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTAATGCACAAACGAATGTGTTCATTCACATACTGCAATTTCTG  1091

seq1  TATGGTGATCAACACTATTGACAACACATTAGGCATTTGTAGGAACTAGT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGATCAACACTATTGACAACACATTAGGCATTTGTAGGAACTAGT  1141

seq1  ATGAGACAGAATTC  1158
      ||||||||||||||
seq2  ATGAGACAGAATTC  1155


seq1: chr7_76394978_76396104
seq2: B6Ng01-283P16.g_64_1204

seq1  GAATTCCAAACCCCAGACAACTTCGAGTCCAGGCAAACCAAGGAAATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACCCCAGACAACTTCGAGTCCAGGCAAACCAAGGAAATTTA  50

seq1  CTACCCTATAGCCCACTTTCTGCTTTTATTATCTACTTACACACCTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTATAGCCCACTTTCTGCTTTTATTATCTACTTACACACCTATTA  100

seq1  TCTATTTATCATTTTGTCTATCATCCATCTAATCTTTTATGATGCATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTATCATTTTGTCTATCATCCATCTAATCTTTTATGATGCATGGA  150

seq1  AATGATTGAATTAACATTTCTGAACATTTTTATATTTCTACCAAATTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGAATTAACATTTCTGAACATTTTTATATTTCTACCAAATTCAT  200

seq1  TTTAATGAGGGCTGGAGAGATTGCTCAGTGGTTAAGAACATTGGCTACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGAGGGCTGGAGAGATTGCTCAGTGGTTAAGAACATTGGCTACTC  250

seq1  TTGAACAAGACACAGGCTTGGTTCCCATTACACACATGATGGTTTATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAAGACACAGGCTTGGTTCCCATTACACACATGATGGTTTATAAC  300

seq1  CATCTTTAGCTCCAGTTCTCTATATTTACCAAGCACCAACATGATACCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTAGCTCCAGTTCTCTATATTTACCAAGCACCAACATGATACCGA  350

seq1  TATGTACATGCAGGCAAAAATAAAATAAATGAATCTTTAAAAGCATCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACATGCAGGCAAAAATAAAATAAATGAATCTTTAAAAGCATCTTT  400

seq1  AACAGATTTAGAGTCAACAATATTGAATGATATATAGATCATTCATCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATTTAGAGTCAACAATATTGAATGATATATAGATCATTCATCTGG  450

seq1  GAAAAAAAAGACTGTAAAAACCGTTCTTGAAATTACCTTACCTTATTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAGACTGTAAAAACCGTTCTTGAAATTACCTTACCTTATTTTG  500

seq1  GAGTTCTGAGATGGTACTGGGATGGGTGATGATCAGGTTACAGCAGCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTGAGATGGTACTGGGATGGGTGATGATCAGGTTACAGCAGCACC  550

seq1  TAGTGTAGAATGGTGCTGCTGCTCACCTGCCCCTAGAACCCTGTAGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAGAATGGTGCTGCTGCTCACCTGCCCCTAGAACCCTGTAGATGG  600

seq1  AGCCCTCAGCCAATTGGTAGGATCTCTCCACACAGATTGAGTTCCTTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCAGCCAATTGGTAGGATCTCTCCACACAGATTGAGTTCCTTTGG  650

seq1  GTTGATTATGATTGATTATGGTAGTTTCTTCATTACTTTAAACCTAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTATGATTGATTATGGTAGTTTCTTCATTACTTTAAACCTAATCA  700

seq1  GTGCTTAGAGTAATTTGAGTAATGATTGCTCATTATTGGCAATTGTGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTAGAGTAATTTGAGTAATGATTGCTCATTATTGGCAATTGTGAAG  750

seq1  TTTAAGTCTTTCCCTGTTTTGCTTCATAGGCAGCCAGTTGAGAAACACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTCTTTCCCTGTTTTGCTTCATAGGCAGCCAGTTGAGAAACACTT  800

seq1  GGGAAACATTCTTG-TTCACACACATTTTCCAAGCAAAAGTGTGAATAAA  849
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGGAAACATTCTTGTTTCACACACATTTTCCAAGCAAAAGTGTGAATAAA  850

seq1  TGATTCAAAGAGTCTGGATGGACAGGAAATCATGGATGA-TTTTTCAGAA  898
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGATTCAAAGAGTCTGGATGGACAGGAAATCATGGATGATTTTTTCAGAA  900

seq1  GTTATA-TTACATGTC-TTTTGGCATGAAAG-AATGGTAGTTCCCCCAGA  945
      |||||| ||||||||| |||||||||||||| ||||||||||||||||||
seq2  GTTATATTTACATGTCTTTTTGGCATGAAAGAAATGGTAGTTCCCCCAGA  950

seq1  TCAAATG-TGA--TAATCAAAGATAGTTCTTACT-GGATTT--GAAAGCC  989
      ||||||| |||   |||||||||||||||||||| ||||||   ||||||
seq2  TCAAATGTTGAATAAATCAAAGATAGTTCTTACTGGGATTTTGAAAAGCC  1000

seq1  G--TTCAGCCTTTTACAGAAATTCCAAGTTCAATAAATCATGCTATTTCA  1037
      |  ||||| ||||||||| || ||| || |||||||||||||||||||||
seq2  GGTTTCAG-CTTTTACAGGAAATCCCAG-TCAATAAATCATGCTATTTCA  1048

seq1  TATCATATTGTTATTCCACTCT-GTCTTATAAATGAAGATC-TATGACT-  1084
      ||||||  || |||||  |||| | ||||| |||||   || ||||||| 
seq2  TATCATTATGGTATTCACCTCTGGCCTTAT-AATGAGATTCATATGACTC  1097

seq1  CTCCAACCAATTTGCTATTGTTTCAAAA-GATAATTAATGATGC  1127
      |||||||| ||||||||||||| ||||| ||  |||||||||||
seq2  CTCCAACCCATTTGCTATTGTTCCAAAAGGAATATTAATGATGC  1141


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