BAC Information

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BAC

Clone NameB6Ng01-284A07
Chromosome7 (Build37)
Map Location 58,088,936 - 58,233,306
singlet/doubletdoublet
Overlap geneNell1, EG668766, EG668767, EG668768, EG638046, EG668770
Upstream genePrmt3, Slc6a5, 4933405O20Rik
Downstream geneEG668774, LOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284A07.bB6Ng01-284A07.g
ACCGA082828GA082829
length1,1711,089
definitionB6Ng01-284A07.b B6Ng01-284A07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,232,124 - 58,233,306)(58,088,936 - 58,090,025)
sequence
gaattcctgttgtaggtgtgaagtctaaaagcaaaacatatggaataagt
cacactaaaccagtaataggaactacaaaagcagttaatgactcttctgc
acctatgtctctggcccagcttatagagactgccaatctggctgaggcca
atgcttctgaggaagacaaaattaaagcaatgatgatacaatctggccat
ttatataacccaatcaattacatgaagaaaactccagtaggcttgccacc
tccatcttacacctgctttcgttgtggtaaacctggtcattatattaaga
attgcccaaccaatgcagataagaactttgaatctcgtcctaggatcaga
aagagcactggaattcctagaagttttatgatggaagtgaaagatcctaa
catgaaaggtgcaatgcttacaaaaactgggcaatatgtaatcccgacta
taaatgcagaggcctatgcaattgggaagaaagagaaaccacccttctta
ccagaggaaccatcatcatcatcatcttcagaagaagttgatcctgtccc
agacgagttcttgtgcctcatctgcaaggacaccatgactgatgctgcta
tcatcccctgctgtggaaacagttactgtgatgaatgtataaggacagca
cttctggagtcagatgaacatacatgtccaacatgtcatcaaaatgatgt
ttctcctgatgctttagttgccaacaaggttttacgacaggctgttaata
actttaaaaatcaaactgactacacaaagagactgggaaaacaggtcact
ccgtccccacccccactacctccaccaagtgcactcattcagcagaacct
gcagcctcctatgaaatctctcacatctagacagcagatcctctgaagat
tccaatgacatcgtcctcagcctcagctcacccaactccctctgtaacct
cattagcttcaaattcatcttcctcggctccttctgtgcctggaacccat
ctcctgccccagctccgtaccgagatcactgcagagtatctgtatcagac
ttcagaaaatcagatgggatccttttcggattcagaaacattattaacag
ctgcccgccctacatcagaacattcaatggaagcctctcaatgccgtacc
tgctcctatgggagaaaagcg
gaattctctgtttcgctctgcgttctatttttttttaattgtgttatttg
gtttgttggtgtctaacttcttgagttatttctaaattttggatattaat
actctctcagatgtagaagatcatttcccaaactctaggctgccattttg
ttccattggcggtgtcctttgccttcaaactttgccatttcatacagtcc
catttatcttagggtccgagccattggtgttctgttcaggaaattgtttc
ctgtatgaatcagcgaggcatatctttatatacatctatgagtgagttta
tttccagaggtaattaactaagaaacaaggcatactccaaataaggtacc
attccataaaatggtgtctcatgcctgtactcataggttccctgtcacaa
tgtataccttcgaacggtgagccaggataaggcaattctccttacgatga
cctagtcagacatttttctccgatttttgagaaaagtattcaatataatt
agcaaatcaaatgtgttcaataaatatctgttagcacacacattaatcaa
ggaatcttagaaagattgtatttctttttccatgacctatgaggacattg
acccatatacaaattatcctgattaaacatagctgtaccttgtatgaatg
ccaagaattttgtttgtttcaactctagcagccttaaagataaggaagta
ttagagataaacacagtaagagagtgatttaaagtattaagggaaatttt
taaattactaataaaattacaatacagaggatggttccagttaaagtaga
ataaaaccctaacttgtgttgaagtgacttagtttttcatttattaaaat
gtttattgttttacatttgttttatcatttaaatgtgtgtgtgtgtgtgt
ctgtatgcaagtaactatgtgtacatgattgcccttggagagtagacata
tcagatttcttgaactatagttagatgcagatagagccatttacatggcc
ttctgcaaactgaacttgagtctctggaatagcagcatgttcctcttacc
cactgagcaatctctcattccatgatgggggacctttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58232124_58233306
seq2: B6Ng01-284A07.b_48_1218 (reverse)

seq1  CGCTTTTCTTCCATAGGAGCAGTAACAGCAATTGAAGAGGCTCCCTTTGA  50
      ||||||||| ||||||||||||  || || |||| ||||||| || ||||
seq2  CGCTTTTCTCCCATAGGAGCAGGTACGGC-ATTG-AGAGGCTTCCATTGA  48

seq1  ATGTTCTGATGTAAGGGCGGCAGCTGGTAATAATTGGTTTTCTGATTCCC  100
      ||||||||||||| ||  |||||||| |||||||    ||||||| ||| 
seq2  ATGTTCTGATGTAGGGCGGGCAGCTGTTAATAAT---GTTTCTGAATCCG  95

seq1  GAAAGGAT-CCATCTGATTTTTCTGAAAGGTCTGATACAGATACTCTTGC  149
       ||||||| |||||||| |||||||||  ||||||||||||||||| |||
seq2  AAAAGGATCCCATCTGA-TTTTCTGAA--GTCTGATACAGATACTC-TGC  141

seq1  AGTGGTCTCGGGTACGGGAGCTGGGGCAGGAGATGGGTTTCCAGGCACAG  199
      |||| |||| ||||| ||||||||||||||||||||| ||||||||||||
seq2  AGTGATCTC-GGTAC-GGAGCTGGGGCAGGAGATGGG-TTCCAGGCACAG  188

seq1  AAGGAGCCGAGGAAGATGAATTTGAAGCTAATGAGGTTACAGAGGGAGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCCGAGGAAGATGAATTTGAAGCTAATGAGGTTACAGAGGGAGTT  238

seq1  GGGTGAGCTGAGGCTGAGGACGATGTCATTGGAATCTTCAGAGGATCCTG  299
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGTGAGCTGAGGCTGAGGACGATGTCATTGGAATCTTCAGAGGAT-CTG  287

seq1  CTGTCTAGATGTGAGAGATTTCATAGGAGGCTGCAGGTTCTGCTGAATGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAGATGTGAGAGATTTCATAGGAGGCTGCAGGTTCTGCTGAATGA  337

seq1  GTGCACTTGGTGGAGGTAGTGGGGGTGGGGACGGAGTGACCTGTTTTCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTTGGTGGAGGTAGTGGGGGTGGGGACGGAGTGACCTGTTTTCCC  387

seq1  AGTCTCTTTGTGTAGTCAGTTTGATTTTTAAAGTTATTAACAGCCTGTCG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTTGTGTAGTCAGTTTGATTTTTAAAGTTATTAACAGCCTGTCG  437

seq1  TAAAACCTTGTTGGCAACTAAAGCATCAGGAGAAACATCATTTTGATGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCTTGTTGGCAACTAAAGCATCAGGAGAAACATCATTTTGATGAC  487

seq1  ATGTTGGACATGTATGTTCATCTGACTCCAGAAGTGCTGTCCTTATACAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGACATGTATGTTCATCTGACTCCAGAAGTGCTGTCCTTATACAT  537

seq1  TCATCACAGTAACTGTTTCCACAGCAGGGGATGATAGCAGCATCAGTCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACAGTAACTGTTTCCACAGCAGGGGATGATAGCAGCATCAGTCAT  587

seq1  GGTGTCCTTGCAGATGAGGCACAAGAACTCGTCTGGGACAGGATCAACTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCTTGCAGATGAGGCACAAGAACTCGTCTGGGACAGGATCAACTT  637

seq1  CTTCTGAAGATGATGATGATGATGGTTCCTCTGGTAAGAAGGGTGGTTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAAGATGATGATGATGATGGTTCCTCTGGTAAGAAGGGTGGTTTC  687

seq1  TCTTTCTTCCCAATTGCATAGGCCTCTGCATTTATAGTCGGGATTACATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTCCCAATTGCATAGGCCTCTGCATTTATAGTCGGGATTACATA  737

seq1  TTGCCCAGTTTTTGTAAGCATTGCACCTTTCATGTTAGGATCTTTCACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCAGTTTTTGTAAGCATTGCACCTTTCATGTTAGGATCTTTCACTT  787

seq1  CCATCATAAAACTTCTAGGAATTCCAGTGCTCTTTCTGATCCTAGGACGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATAAAACTTCTAGGAATTCCAGTGCTCTTTCTGATCCTAGGACGA  837

seq1  GATTCAAAGTTCTTATCTGCATTGGTTGGGCAATTCTTAATATAATGACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAGTTCTTATCTGCATTGGTTGGGCAATTCTTAATATAATGACC  887

seq1  AGGTTTACCACAACGAAAGCAGGTGTAAGATGGAGGTGGCAAGCCTACTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTACCACAACGAAAGCAGGTGTAAGATGGAGGTGGCAAGCCTACTG  937

seq1  GAGTTTTCTTCATGTAATTGATTGGGTTATATAAATGGCCAGATTGTATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTCTTCATGTAATTGATTGGGTTATATAAATGGCCAGATTGTATC  987

seq1  ATCATTGCTTTAATTTTGTCTTCCTCAGAAGCATTGGCCTCAGCCAGATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGCTTTAATTTTGTCTTCCTCAGAAGCATTGGCCTCAGCCAGATT  1037

seq1  GGCAGTCTCTATAAGCTGGGCCAGAGACATAGGTGCAGAAGAGTCATTAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTCTCTATAAGCTGGGCCAGAGACATAGGTGCAGAAGAGTCATTAA  1087

seq1  CTGCTTTTGTAGTTCCTATTACTGGTTTAGTGTGACTTATTCCATATGTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTGTAGTTCCTATTACTGGTTTAGTGTGACTTATTCCATATGTT  1137

seq1  TTGCTTTTAGACTTCACACCTACAACAGGAATTC  1183
      ||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTAGACTTCACACCTACAACAGGAATTC  1171

seq1: chr7_58088936_58090025
seq2: B6Ng01-284A07.g_63_1151

seq1  GAATTCTCTGTTTCGCTCTGCGTTCTATTTTTTTTTAATTGTGTTATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTCGCTCTGCGTTCTATTTTTTTTTAATTGTGTTATTTG  50

seq1  GTTTGTTGGTGTCTAACTTCTTGAGTTATTTCTAAATTTTGGATATTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGGTGTCTAACTTCTTGAGTTATTTCTAAATTTTGGATATTAAT  100

seq1  ACTCTCTCAGATGTAGAAGATCATTTCCCAAACTCTAGGCTGCCATTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTCAGATGTAGAAGATCATTTCCCAAACTCTAGGCTGCCATTTTG  150

seq1  TTCCATTGGCGGTGTCCTTTGCCTTCAAACTTTGCCATTTCATACAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGGCGGTGTCCTTTGCCTTCAAACTTTGCCATTTCATACAGTCC  200

seq1  CATTTATCTTAGGGTCCGAGCCATTGGTGTTCTGTTCAGGAAATTGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATCTTAGGGTCCGAGCCATTGGTGTTCTGTTCAGGAAATTGTTTC  250

seq1  CTGTATGAATCAGCGAGGCATATCTTTATATACATCTATGAGTGAGTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGAATCAGCGAGGCATATCTTTATATACATCTATGAGTGAGTTTA  300

seq1  TTTCCAGAGGTAATTAACTAAGAAACAAGGCATACTCCAAATAAGGTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAGGTAATTAACTAAGAAACAAGGCATACTCCAAATAAGGTACC  350

seq1  ATTCCATAAAATGGTGTCTCATGCCTGTACTCATAGGTTCCCTGTCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATAAAATGGTGTCTCATGCCTGTACTCATAGGTTCCCTGTCACAA  400

seq1  TGTATACCTTCGAACGGTGAGCCAGGATAAGGCAATTCTCCTTACGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACCTTCGAACGGTGAGCCAGGATAAGGCAATTCTCCTTACGATGA  450

seq1  CCTAGTCAGACATTTTTCTCCGATTTTTGAGAAAAGTATTCAATATAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCAGACATTTTTCTCCGATTTTTGAGAAAAGTATTCAATATAATT  500

seq1  AGCAAATCAAATGTGTTCAATAAATATCTGTTAGCACACACATTAATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATCAAATGTGTTCAATAAATATCTGTTAGCACACACATTAATCAA  550

seq1  GGAATCTTAGAAAGATTGTATTTCTTTTTCCATGACCTATGAGGACATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTTAGAAAGATTGTATTTCTTTTTCCATGACCTATGAGGACATTG  600

seq1  ACCCATATACAAATTATCCTGATTAAACATAGCTGTACCTTGTATGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATATACAAATTATCCTGATTAAACATAGCTGTACCTTGTATGAATG  650

seq1  CCAAGAATTTTGTTTGTTTCAACTCTAGCAGCCTTAAAGATAAGGAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAATTTTGTTTGTTTCAACTCTAGCAGCCTTAAAGATAAGGAAGTA  700

seq1  TTAGAGATAAACACAGTAAGAGAGTGATTTAAAGTATTAAGGGAAATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGATAAACACAGTAAGAGAGTGATTTAAAGTATTAAGGGAAATTTT  750

seq1  TAAATTACTAATAAAATTACAATACAGAGGATGGTTCCAGTT-AAGTAGA  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAAATTACTAATAAAATTACAATACAGAGGATGGTTCCAGTTAAAGTAGA  800

seq1  ATAAAACCCTAACTTGTGTTGAAGTGACTTAGTTTTTCATTTATTAAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACCCTAACTTGTGTTGAAGTGACTTAGTTTTTCATTTATTAAAAT  850

seq1  GTTTATTGTTTTACATTTGTTTTATCATTTAAATGTGTGTGTGTGTGTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGTTTTACATTTGTTTTATCATTTAAATGTGTGTGTGTGTGTGT  900

seq1  CTGTATGCAAGTAACTATGTGTACATGATTGCCCTTGGAGAGTAGACATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGCAAGTAACTATGTGTACATGATTGCCCTTGGAGAGTAGACATA  950

seq1  TCAGATTTCTTGAACTATAGTTAGATGCAGATAGAGCCATTTAACATGGC  999
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCAGATTTCTTGAACTATAGTTAGATGCAGATAGAGCCATTT-ACATGGC  999

seq1  C-TCTGCAAACTGAACTTGAGTTCTCTGGATAAGCAGCATGTT-CTCTTA  1047
      | ||||||||||||||||||| ||||||||  ||||||||||| ||||||
seq2  CTTCTGCAAACTGAACTTGAG-TCTCTGGAATAGCAGCATGTTCCTCTTA  1048

seq1  ACCACTGAGCAATCTCTCCATTTCCATGATTGGGGACTTTTAA  1090
       |||||||||||||||||   ||||||||| |||||| |||||
seq2  CCCACTGAGCAATCTCTC--ATTCCATGATGGGGGACCTTTAA  1089