BAC Information

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BAC

Clone NameB6Ng01-285B05
Chromosome7 (Build37)
Map Location 25,061,021 - 25,218,840
singlet/doubletdoublet
Overlap geneZfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1
Upstream geneEG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108
Downstream genePlaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285B05.bB6Ng01-285B05.g
ACCGA083619GA083620
length1,1261,053
definitionB6Ng01-285B05.b B6Ng01-285B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,217,706 - 25,218,840)(25,061,021 - 25,061,724)
sequence
gaattcaggtgtgagacttctgacttcttattgtggttgtttctgagaca
gaagctcactaggaagccctggctagcccaaaactcactgttcaagccta
ggttggccttgaacttacatagatctgtctcagcttctcagtactgagat
taaaactatgtgccaccacacctgggcattgtgagtcactctcactgtcc
tgggactcatggtgatcctccagtctcaagctccccagtgctgaattaca
ggtgagagccagggtaccccgttcttgaggaagagagctggaaactggaa
acggtctagtgagaacttggcctccctgacatctgatcaagagcgtgata
tgcgaacgtctcctttctcctgcagccactgaggagtcacattctgtgac
tgtcccccatcttcctgcccagctctgaaccatggcaacttccaggttgc
ccgccgtgcctgaggagaccaccatcctcatggccaaggaagagctggag
gccctgcgcactgcttttgagtctggcgacatccctcaagccgcctctcg
ccttcgggagctgctggccaactcagagaccacccggctggaagtgggcg
tcacgggtgagtcgggagccggcaagtcctccctcatcaatgccctacgc
ggcctgggggccgaggatcctggcgcagctctcactggggtcgtggagac
caccatgcagccttcgccctacccgcacccgcagtttcccgacgtgaccc
tgtgggacctgccgggggccggttctccaggctgctcagcagacaagtat
ctgaagcagtggatttcggccgctatgacttcttcttgctcgtctccccc
cgtcgctgtggcgccgtggagtcccgcctcgcttctgagatcctgcgcca
ggggaaagaagttttactttgtgcgcaccaaggtggacgagatctgggcg
gccacccgcagccagaggccctcgggtttcagcgagctgcagtcctccag
agatccgagatcactgcacggagcgctgcggtagcgggtgtgatgatccc
cgcatctttctgtgtccaactgtcgcaacccgctatgacttccgatgctc
gtgaccacctggaacacgaacctgcc
gaattcacacaggagagaagccatataagtgtggagactgtggcaagcgc
ttcagctgtagctcgaacctccacacccaccagagagtccacactgagga
gaaaccttatgagtgtaatgagtgtgggaagcgcttcagcttaagtggca
acctagacatccatcagcgggtccacacaggagagaagccatataaatgt
gaagagtgtgggaagggtttcagttcagcctcaagcttccaaagccacca
gagggtccataccggagagaagccatttcactgcagtgtctgtgggaaga
acttcagtcggagctcacattttctagatcaccaaagaattcacactggg
gaaaaaccgtatagatgtgaagtgtgtgggaagcgcttcccctggagctt
gagccttcatagtcaccagagtgtgcacacaggaaagaaaccgtataaat
gtggggagtgtgggaaaggcttcagtcatgcctccagtctgcaggcccat
cacagtgtccacaccggtgaaaaaccattcaaatgcaatgtttgccagaa
gcagttcagcaagacctcaaacctccaggcccaccagagggttcacacag
gggagaagccctacaaatgcgacacgtgtgggaaagccttcagccagaag
tccagtctccaagtccatcagagaattcacactgggggagaagccgttca
agtgtgaggagtgtgggaaggaattcagatggagcgtggggctgagttct
caccagagggtccacacaggagagaaaccctacacgtgtccagcagtgtg
ggaaaggtttcagttcaggtctcaatattttccatatgcacccagagggt
ccacacttatatagagacctttaaattcggccatatttgcttgtaggggc
tatagtcagagatcaccatcttgtcttccaccagaggatccacacttgca
tgggaatctttagtttctgcctgtcaaggtgggctcttggctgatgattg
ttaaaagttatccccaacacgctaagtcttcatggaaaacttcataatgg
agc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25217706_25218840
seq2: B6Ng01-285B05.b_47_1172 (reverse)

seq1  GGCAGG-TCGTGCTCCCAGGTGGTCACGAGCATCGGGAAGTCATAGCGGG  49
      |||||| ||||| | ||||||||||||||||||| |||||||||||||||
seq2  GGCAGGTTCGTG-TTCCAGGTGGTCACGAGCATC-GGAAGTCATAGCGGG  48

seq1  TTGGCGACAGGTTGGACACCAGGAAGATGCGGGGATCATTCACACCCGCT  99
      || |||||| |||||||| ||| ||||||||||||||| |||||||||||
seq2  TT-GCGACA-GTTGGACA-CAGAAAGATGCGGGGATCA-TCACACCCGCT  94

seq1  ACCCGCAGCCGCTCCGTGCAGTGATCTCGGATCTCCTGGAGGACTGCAGC  149
      | |||||| ||||||||||||||||||||||||| |||||||||||||| 
seq2  A-CCGCAG-CGCTCCGTGCAGTGATCTCGGATCT-CTGGAGGACTGCAG-  140

seq1  CTCGCTGAAACCCGAGGGCCTCTGGCTGCGGGTGGCCG-CCAGATCCTCG  198
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  CTCGCTGAAACCCGAGGGCCTCTGGCTGCGGGTGGCCGCCCAGAT-CTCG  189

seq1  TCCACCTTGGTGCGCACAAAGTAAAACTTC-TTCCCCTGGCGCAGGATCT  247
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCCACCTTGGTGCGCACAAAGTAAAACTTCTTTCCCCTGGCGCAGGATCT  239

seq1  CAGAAGCGAGGCGGGACTCCACGGCGCCACAGCGACGGGGGGAGACGAGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCGAGGCGGGACTCCACGGCGCCACAGCGACGGGGGGAGACGAGC  289

seq1  AAGAAGAAGTCATAGCGGCCGAAATCCACCTGCTTCAGATACTTGTCTGC  347
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGAAGAAGTCATAGCGGCCGAAATCCA-CTGCTTCAGATACTTGTCTGC  338

seq1  TGAGCAGCCTGGAGAACCGGCCCCCGGCAGGTCCCACAGGGTCACGTCGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGCCTGGAGAACCGGCCCCCGGCAGGTCCCACAGGGTCACGTCGG  388

seq1  GAAACTGCGGGTGCGGGTAGGGCGAAGGCTGCATGGTGGTCTCCACGACC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGCGGGTGCGGGTAGGGCGAAGGCTGCATGGTGGTCTCCACGACC  438

seq1  CCAGTGAGAGCTGCGCCAGGATCCTCGGCCCCCAGGCCGCGTAGGGCATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAGAGCTGCGCCAGGATCCTCGGCCCCCAGGCCGCGTAGGGCATT  488

seq1  GATGAGGGAGGACTTGCCGGCTCCCGACTCACCCGTGACGCCCACTTCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGGAGGACTTGCCGGCTCCCGACTCACCCGTGACGCCCACTTCCA  538

seq1  GCCGGGTGGTCTCTGAGTTGGCCAGCAGCTCCCGAAGGCGAGAGGCGGCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGTGGTCTCTGAGTTGGCCAGCAGCTCCCGAAGGCGAGAGGCGGCT  588

seq1  TGAGGGATGTCGCCAGACTCAAAAGCAGTGCGCAGGGCCTCCAGCTCTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGATGTCGCCAGACTCAAAAGCAGTGCGCAGGGCCTCCAGCTCTTC  638

seq1  CTTGGCCATGAGGATGGTGGTCTCCTCAGGCACGGCGGGCAACCTGGAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCATGAGGATGGTGGTCTCCTCAGGCACGGCGGGCAACCTGGAAG  688

seq1  TTGCCATGGTTCAGAGCTGGGCAGGAAGATGGGGGACAGTCACAGAATGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATGGTTCAGAGCTGGGCAGGAAGATGGGGGACAGTCACAGAATGT  738

seq1  GACTCCTCAGTGGCTGCAGGAGAAAGGAGACGTTCGCATATCACGCTCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTCAGTGGCTGCAGGAGAAAGGAGACGTTCGCATATCACGCTCTT  788

seq1  GATCAGATGTCAGGGAGGCCAAGTTCTCACTAGACCGTTTCCAGTTTCCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGATGTCAGGGAGGCCAAGTTCTCACTAGACCGTTTCCAGTTTCCA  838

seq1  GCTCTCTTCCTCAAGAACGGGGTACCCTGGCTCTCACCTGTAATTCAGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTCCTCAAGAACGGGGTACCCTGGCTCTCACCTGTAATTCAGCA  888

seq1  CTGGGGAGCTTGAGACTGGAGGATCACCATGAGTCCCAGGACAGTGAGAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAGCTTGAGACTGGAGGATCACCATGAGTCCCAGGACAGTGAGAG  938

seq1  TGACTCACAATGCCCAGGTGTGGTGGCACATAGTTTTAATCTCAGTACTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCACAATGCCCAGGTGTGGTGGCACATAGTTTTAATCTCAGTACTG  988

seq1  AGAAGCTGAGACAGATCTATGTAAGTTCAAGGCCAACCTAGGCTTGAACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGAGACAGATCTATGTAAGTTCAAGGCCAACCTAGGCTTGAACA  1038

seq1  GTGAGTTTTGGGCTAGCCAGGGCTTCCTAGTGAGCTTCTGTCTCAGAAAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTTTGGGCTAGCCAGGGCTTCCTAGTGAGCTTCTGTCTCAGAAAC  1088

seq1  AACCACAATAAGAAGTCAGAAGTCTCACACCTGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||
seq2  AACCACAATAAGAAGTCAGAAGTCTCACACCTGAATTC  1126

seq1: chr7_25061021_25061724
seq2: B6Ng01-285B05.g_397_1120

seq1  CACCAAAGAATTCACACTGGGGAAAAACCGTATAGATGTGAAGTGTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAGAATTCACACTGGGGAAAAACCGTATAGATGTGAAGTGTGTGG  50

seq1  GAAGCGCTTCCCCTGGAGCTTGAGCCTTCATAGTCACCAGAGTGTGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGCTTCCCCTGGAGCTTGAGCCTTCATAGTCACCAGAGTGTGCACA  100

seq1  CAGGAAAGAAACCGTATAAATGTGGGGAGTGTGGGAAAGGCTTCAGTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGAAACCGTATAAATGTGGGGAGTGTGGGAAAGGCTTCAGTCAT  150

seq1  GCCTCCAGTCTGCAGGCCCATCACAGTGTCCACACCGGTGAAAAACCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGTCTGCAGGCCCATCACAGTGTCCACACCGGTGAAAAACCATT  200

seq1  CAAATGCAATGTTTGCCAGAAGCAGTTCAGCAAGACCTCAAACCTCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCAATGTTTGCCAGAAGCAGTTCAGCAAGACCTCAAACCTCCAGG  250

seq1  CCCACCAGAGGGTTCACACAGGGGAGAAGCCCTACAAATGCGACACGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAGAGGGTTCACACAGGGGAGAAGCCCTACAAATGCGACACGTGT  300

seq1  GGGAAAGCCTTCAGCCAGAAGTCCAGTCTCCAAGTCCATCAGAGAATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGCCTTCAGCCAGAAGTCCAGTCTCCAAGTCCATCAGAGAATTCA  350

seq1  CACT-GGGGAGAAGCCGTTCAAGTGTGAGGAGTGTGGGAAGGAATTCAGA  399
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGGAGAAGCCGTTCAAGTGTGAGGAGTGTGGGAAGGAATTCAGA  400

seq1  TGGAGCGTGGGGCTGAGTTCTCACCAGAGGGTCCACACAGGAGAGAAACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCGTGGGGCTGAGTTCTCACCAGAGGGTCCACACAGGAGAGAAACC  450

seq1  CTACACGTGT-CAGCAGTGTGGGAAAGGTTTCAG-TCAGGCCTC-ATA-T  495
      |||||||||| ||||||||||||||||||||||| ||||| ||| ||| |
seq2  CTACACGTGTCCAGCAGTGTGGGAAAGGTTTCAGTTCAGGTCTCAATATT  500

seq1  TTCCATATGCA-CCAGAGGGTCCACAC-TATATAGAGACCTT--AAATCG  541
      ||||||||||| ||||||||||||||| ||||||||||||||  || |||
seq2  TTCCATATGCACCCAGAGGGTCCACACTTATATAGAGACCTTTAAATTCG  550

seq1  GCCATATTTGC-TGTAGGGGCTATAGTCAGAGATCA-CATCTTGTCTTCC  589
      ||||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  GCCATATTTGCTTGTAGGGGCTATAGTCAGAGATCACCATCTTGTCTTCC  600

seq1  ACCAGAGAATCCACAC-TGCAT-GGAATCTTTAGTTTCTG-CTGTC-AGG  635
      ||||||| |||||||| ||||| ||||||||||||||||| ||||| |||
seq2  ACCAGAGGATCCACACTTGCATGGGAATCTTTAGTTTCTGCCTGTCAAGG  650

seq1  TGGGCTCTTGGCTGATGATTGTTAAAAG-TATCCCCAACACGCAGAGTCT  684
      |||||||||||||||||||||||||||| ||||||||||||||  |||||
seq2  TGGGCTCTTGGCTGATGATTGTTAAAAGTTATCCCCAACACGCTAAGTCT  700

seq1  TCA--GGAGACTTCATA--GGAGC  704
      |||  | | ||||||||  |||||
seq2  TCATGGAAAACTTCATAATGGAGC  724