BAC Information

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BAC

Clone NameB6Ng01-285M04
Chromosome7 (Build37)
Map Location 26,622,274 - 26,622,887
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732
Downstream geneEG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c, LOC100043195, Nlrp4a, Nlrp9a, V1re12, EG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285M04.bB6Ng01-285M04.g
ACCGA084127GA084128
length1,008614
definitionB6Ng01-285M04.b B6Ng01-285M04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccgaatgcctgagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcaaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacacttctcctttgctggtg
ggattgcaagctggtacaaccactttagaaatcagattggcggttcctta
gaaaattggacatagtactactagaagatccagcaatacctctcctgggc
atatacccagaagatgttccaacttgtaataaggacatatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccaaat
gtcccccaacagagaaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagcaattgaaaacaatgaatttatgaaattcttaggcaa
atggatggatctggagaatattgtcctgagttaagtaacccaatcacaaa
agaacacacataatatgcactcactgataagtggatattagcccagaaac
ttagactatccaaaatacaatttgcaaaacacatgaaactcaagaagaag
gaagaccaaagtgtggatactttgttccttcttagaatggggaacaaaat
ccccatgaaaggagttacagagacaaagtttggacctgagatggaagaaa
ggaccatccagacactgccccacccagggatttatcccatatactacaac
caaacccagacactattacatatgccagaaagatttttctgacaggaccc
tgatatagctatctcttgtgaggctatgccagtgcctggcaaatatagaa
gtggatgctcatggtcatctgtttgaatgggaacacagggccccttaaag
aatgagctagagaaagtacccaagggaactaaaggggtcagcatccctat
aagaggat
gaattcatagagatctgcctgcctctgcctcctgagtcctggaactgaag
gcttggtgaagcccccttcctctgagctcaacttctagcctttcttcttt
ctttttaactttttacttagttaatattattttacattttaaattatgat
cattactttttgtctgtctgtctgtatgtctgtctgtggatgggttggtg
tgcatattccatgttgcatgtgtgtaagtcaggagactgcctaggagaat
cagccctctccctccaccagctggaggtcaacctcaggtcgtcaagcttg
gcagcagtcaccttcccttgctgagccctctcgctggttacaagttcctt
tctggagagagtgcctcactaagttgagcaggatgaccttcagcttcgta
gcctacgctggccctgaactttacctcttcctgcctcagcctcccaggta
gttaggaggacagtcataatctgccaaccccctccctcactccctcacct
ccactgaagatttttctagaagacagagactcagctgaggttaccttggg
ggaagcacatagatcgtctaccaaggctttactgagctgggcaatctcac
aacactgggagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_26622274_26622887
seq2: B6Ng01-285M04.g_69_682

seq1  GAATTCATAGAGATCTGCCTGCCTCTGCCTCCTGAGTCCTGGAACTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGAGATCTGCCTGCCTCTGCCTCCTGAGTCCTGGAACTGAAG  50

seq1  GCTTGGTGAAGCCCCCTTCCTCTGAGCTCAACTTCTAGCCTTTCTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTGAAGCCCCCTTCCTCTGAGCTCAACTTCTAGCCTTTCTTCTTT  100

seq1  CTTTTTAACTTTTTACTTAGTTAATATTATTTTACATTTTAAATTATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAACTTTTTACTTAGTTAATATTATTTTACATTTTAAATTATGAT  150

seq1  CATTACTTTTTGTCTGTCTGTCTGTATGTCTGTCTGTGGATGGGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTTTTTGTCTGTCTGTCTGTATGTCTGTCTGTGGATGGGTTGGTG  200

seq1  TGCATATTCCATGTTGCATGTGTGTAAGTCAGGAGACTGCCTAGGAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATTCCATGTTGCATGTGTGTAAGTCAGGAGACTGCCTAGGAGAAT  250

seq1  CAGCCCTCTCCCTCCACCAGCTGGAGGTCAACCTCAGGTCGTCAAGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTCTCCCTCCACCAGCTGGAGGTCAACCTCAGGTCGTCAAGCTTG  300

seq1  GCAGCAGTCACCTTCCCTTGCTGAGCCCTCTCGCTGGTTACAAGTTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGTCACCTTCCCTTGCTGAGCCCTCTCGCTGGTTACAAGTTCCTT  350

seq1  TCTGGAGAGAGTGCCTCACTAAGTTGAGCAGGATGACCTTCAGCTTCGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGAGAGTGCCTCACTAAGTTGAGCAGGATGACCTTCAGCTTCGTA  400

seq1  GCCTACGCTGGCCCTGAACTTTACCTCTTCCTGCCTCAGCCTCCCAGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACGCTGGCCCTGAACTTTACCTCTTCCTGCCTCAGCCTCCCAGGTA  450

seq1  GTTAGGAGGACAGTCATAATCTGCCAACCCCCTCCCTCACTCCCTCACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGAGGACAGTCATAATCTGCCAACCCCCTCCCTCACTCCCTCACCT  500

seq1  CCACTGAAGATTTTTCTAGAAGACAGAGACTCAGCTGAGGTTACCTTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAAGATTTTTCTAGAAGACAGAGACTCAGCTGAGGTTACCTTGGG  550

seq1  GGAAGCACATAGATCGTCTACCAAGGCTTTACTGAGCTGGGCAATCTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCACATAGATCGTCTACCAAGGCTTTACTGAGCTGGGCAATCTCAC  600

seq1  AACACTGGGAGATA  614
      ||||||||||||||
seq2  AACACTGGGAGATA  614