BAC Information

Click to search

BAC

Clone NameB6Ng01-286C14
Chromosome7 (Build37)
Map Location 112,153,461 - 112,249,370
singlet/doubletdoublet
Overlap geneGA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1
Upstream geneOlfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672
Downstream geneOlfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286C14.bB6Ng01-286C14.g
ACCGA084428GA084429
length1,0821,150
definitionB6Ng01-286C14.b B6Ng01-286C14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,248,283 - 112,249,370)(112,153,461 - 112,154,599)
sequence
gaattcatgaaattcctaggcaaatggatggacctggagggcatcatcct
gagtgaggtaacccaatcacaaaggaactcacacaatatgtactcactga
taagtggatattagcccagaaacttaggatacccaagatataagatacaa
tttgctaaaggcatgaaactcaagaagctatgaagaccaaagtgtgaaca
ctttgccccttcttagaattgggaacaaaacacccatggaaggagttaca
gagacaaaatttggagccgtgacgaaaggattgaccatctagtgattgcc
atatccagggatccatcccataatcagcttccaaactgcatgtattctta
tctcaaccaaaaatcacgtttcattctcctacatcttcatcttatcttga
ctgatacctgttccatgaaatcacagtcctagatacctattccatgaaat
cacagtcctagattaaatcacgtttctattctcagttactgctgatccac
aaccactaaaagtactcaggacacagcgtaataaatgtctgtctgtcact
ctgtggcttctggttcacctcacatctcaggactaagcactgagctactc
agaggcagcacagagcagagaagcatccatagtaaggccctcttctgatc
tctccatttggtcaggatggatgatttctttaatgtgttcttggattcgg
ttagcgagaattttattaaggatttttgcatcgatattcataagagaaat
tggtctgaagttctctatctttgttggatctttctgtggtttaggtatca
gagtaatagtggcttcataaaatgagttgggtagagtaccttctacttct
atcttgtgaaatagtttgtgcagaactggaattagatcttctttgaaagg
tctgatagaactctgcactaacccatctggtcctgggctttttttggctg
ggagactataataactgcttctatttctttaggggatatgggactgttag
aaggtcaacttgatcctgatctctcatttgcttgtttggcagctgctccc
aaataccagcatcctatatgaaagggacatgg
gaattcatttataatgttaagaataatctcattgctgtcttttcctagga
ttcaagggattatgatttaaaaaaatgctgagtggtgggataatcaagag
ggaacctgggatgggtgattgatttgatatttaaataaatgactggactt
tggtcttcaagagtggggctgtctaattatcttcagaaagctgcctctat
cagaagacaggctatcatcccacaatttgactctagttgttcttttcgct
ggtcctgaacaccacttcctcaaaatccctctataagctgaggctggtcc
ttggcacaggccagatccaattcaactaaatgtaatttatagatttagtg
aaatctcactcaaaattcccatgacattcttcaacaaacagaaaccaaaa
tatcctacaactcttatggaaacacaaaatacccttgatagcctaagaaa
caatgaacacacacatacacacataaaataaaagaaaaacaaaaaggaaa
aacaatgctggagtgattaccattctacatttcaagatatgttacagagc
tatagtaacaaaaagaacatgaaaatctcctttaggtgtgcaatgtcatt
tcattataaactaatttgtatttcctggtgagttttcatgtggttttttt
tgtgactaatctctttatgaaatatctatttgaaacttggctaagttttc
aaatgttggatggttgtcttactacatgtataaaaatgttccgtaaagtt
gcaatccaaatatgttgtctgatatgagttacaagcatatttttacagta
ttgaatttgcagatttcaatttcttagtatattgtaaaaggcaaatttta
aatattttttatgtgacctgtaccagaataggaactatgaaggtcagagg
atgagttaagagtttttcctcagtcatctcttaacagacccactctctga
ttacagcccatgtctaggatgcatgtgagtcatacttgccatctagaaga
aatccttcatgccttgaaaggggcctagaaactcttgtctattcttatag
ggtctttgttctaattactagaagaacacagtgtttgtttgggtgtggcc
aagtgagctaaagattttgattaacctttgcactgtccttagctggaaac

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112248283_112249370
seq2: B6Ng01-286C14.b_50_1131 (reverse)

seq1  CCATGTCCTTTTCATATAGGGATGCTGGGTATTTGGGGAGCAGCTGCCAA  50
      |||||||| ||||||||| ||||||| ||||||| |||||||||||||||
seq2  CCATGTCCCTTTCATATA-GGATGCT-GGTATTT-GGGAGCAGCTGCCAA  47

seq1  ACAAGCAAATGGAGAGATCAGGATCAAGTTGACCTTCTAAACAGTCCCAT  100
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  ACAAGCAAAT-GAGAGATCAGGATCAAGTTGACCTTCT-AACAGTCCCAT  95

seq1  ATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAA  150
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATCCCCTAAAGAAATAGAAGCAGTTATT-ATAGTCTCCCAGCCAAAAAAA  144

seq1  GCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACC-TTCAAAGA  199
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  GCCCAGGACCAGATGGG-TTAGTGCAGAGTTCTATCAGACCTTTCAAAGA  193

seq1  AGATCTAATTCCAGTTCTGCACAAACTATTTCACAAGATAGAAGTAGAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTAATTCCAGTTCTGCACAAACTATTTCACAAGATAGAAGTAGAAG  243

seq1  GTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAA  293

seq1  CCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTAT  343

seq1  GAATATCGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCAAG  393

seq1  AACACATTAAAGAAATCATCCATCCTGACCAAATGGAGAGATCAGAAGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATTAAAGAAATCATCCATCCTGACCAAATGGAGAGATCAGAAGAG  443

seq1  GGCCTTACTATGGATGCTTCTCTGCTCTGTGCTGCCTCTGAGTAGCTCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTACTATGGATGCTTCTCTGCTCTGTGCTGCCTCTGAGTAGCTCAG  493

seq1  TGCTTAGTCCTGAGATGTGAGGTGAACCAGAAGCCACAGAGTGACAGACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGTCCTGAGATGTGAGGTGAACCAGAAGCCACAGAGTGACAGACA  543

seq1  GACATTTATTACGCTGTGTCCTGAGTACTTTTAGTGGTTGTGGATCAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTATTACGCTGTGTCCTGAGTACTTTTAGTGGTTGTGGATCAGCA  593

seq1  GTAACTGAGAATAGAAACGTGATTTAATCTAGGACTGTGATTTCATGGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGAGAATAGAAACGTGATTTAATCTAGGACTGTGATTTCATGGAA  643

seq1  TAGGTATCTAGGACTGTGATTTCATGGAACAGGTATCAGTCAAGATAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATCTAGGACTGTGATTTCATGGAACAGGTATCAGTCAAGATAAGA  693

seq1  TGAAGATGTAGGAGAATGAAACGTGATTTTTGGTTGAGATAAGAATACAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGTAGGAGAATGAAACGTGATTTTTGGTTGAGATAAGAATACAT  743

seq1  GCAGTTTGGAAGCTGATTATGGGATGGATCCCTGGATATGGCAATCACTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGGAAGCTGATTATGGGATGGATCCCTGGATATGGCAATCACTA  793

seq1  GATGGTCAATCCTTTCGTCACGGCTCCAAATTTTGTCTCTGTAACTCCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCAATCCTTTCGTCACGGCTCCAAATTTTGTCTCTGTAACTCCTT  843

seq1  CCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTTCACACTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTTCACACTT  893

seq1  TGGTCTTCATAGCTTCTTGAGTTTCATGCCTTTAGCAAATTGTATCTTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTCATAGCTTCTTGAGTTTCATGCCTTTAGCAAATTGTATCTTAT  943

seq1  ATCTTGGGTATCCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGTATCCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTAC  993

seq1  ATATTGTGTGAGTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTGTGAGTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCC  1043

seq1  CTCCAGGTCCATCCATTTGCCTAGGAATTTCATGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGTCCATCCATTTGCCTAGGAATTTCATGAATTC  1082

seq1: chr7_112153461_112154599
seq2: B6Ng01-286C14.g_69_1218

seq1  GAATTCATTTATAATGTTAAGAATAATCTCATTGCTGTCTTTTCCTAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATAATGTTAAGAATAATCTCATTGCTGTCTTTTCCTAGGA  50

seq1  TTCAAGGGATTATGATTTAAAAAAATGCTGAGTGGTGGGATAATCAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGGATTATGATTTAAAAAAATGCTGAGTGGTGGGATAATCAAGAG  100

seq1  GGAACCTGGGATGGGTGATTGATTTGATATTTAAATAAATGACTGGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTGGGATGGGTGATTGATTTGATATTTAAATAAATGACTGGACTT  150

seq1  TGGTCTTCAAGAGTGGGGCTGTCTAATTATCTTCAGAAAGCTGCCTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTCAAGAGTGGGGCTGTCTAATTATCTTCAGAAAGCTGCCTCTAT  200

seq1  CAGAAGACAGGCTATCATCCCACAATTTGACTCTAGTTGTTCTTTTCGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACAGGCTATCATCCCACAATTTGACTCTAGTTGTTCTTTTCGCT  250

seq1  GGTCCTGAACACCACTTCCTCAAAATCCCTCTATAAGCTGAGGCTGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGAACACCACTTCCTCAAAATCCCTCTATAAGCTGAGGCTGGTCC  300

seq1  TTGGCACAGGCCAGATCCAATTCAACTAAATGTAATTTATAGATTTAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCACAGGCCAGATCCAATTCAACTAAATGTAATTTATAGATTTAGTG  350

seq1  AAATCTCACTCAAAATTCCCATGACATTCTTCAACAAACAGAAACCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCACTCAAAATTCCCATGACATTCTTCAACAAACAGAAACCAAAA  400

seq1  TATCCTACAACTCTTATGGAAACACAAAATACCCTTGATAGCCTAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTACAACTCTTATGGAAACACAAAATACCCTTGATAGCCTAAGAAA  450

seq1  CAATGAACACACACATACACACATAAAATAAAAGAAAAACAAAAAGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAACACACACATACACACATAAAATAAAAGAAAAACAAAAAGGAAA  500

seq1  AACAATGCTGGAGTGATTACCATTCTACATTTCAAGATATGTTACAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGCTGGAGTGATTACCATTCTACATTTCAAGATATGTTACAGAGC  550

seq1  TATAGTAACAAAAAGAACATGAAAATCTCCTTTAGGTGTGCAATGTCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAACAAAAAGAACATGAAAATCTCCTTTAGGTGTGCAATGTCATT  600

seq1  TCATTATAAACTAATTTGTATTTCCTGGTGAGTTTTCATGTGGTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAAACTAATTTGTATTTCCTGGTGAGTTTTCATGTGGTTTTTTT  650

seq1  TGTGACTAATCTCTTTATGAAATATCTATTTGAAACTTGGCTAAGTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTAATCTCTTTATGAAATATCTATTTGAAACTTGGCTAAGTTTTC  700

seq1  AAATGTTGGATGGTTGTCTTACTACATGTATAAAAATGTTCCGTAAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGGATGGTTGTCTTACTACATGTATAAAAATGTTCCGTAAAGTT  750

seq1  GCAATCCAAATATGTTGTCTGATATGAGTTACAAGCATATTTTTACAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCAAATATGTTGTCTGATATGAGTTACAAGCATATTTTTACAGTA  800

seq1  TTGAATTTGCAGATTTCAATTTCTTAGTATATTGTAAAAGGCAAATTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTGCAGATTTCAATTTCTTAGTATATTGTAAAAGGCAAATTTTA  850

seq1  AATA-TTTTTATGTGACCTGTACCAGAATAGGAACTATGAAGGTCAGAGG  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTTATGTGACCTGTACCAGAATAGGAACTATGAAGGTCAGAGG  900

seq1  ATGAGTTAAGAGTTTT--CTCAGTCATCTCTTAACAGGACCCACTCTCTG  947
      ||||||||||||||||  |||||||||||||||||| |||||||||||||
seq2  ATGAGTTAAGAGTTTTTCCTCAGTCATCTCTTAACA-GACCCACTCTCTG  949

seq1  ATTACAGCCCATGTCTAGGATGCATGTGAGTCATACTTGCCATCTAGAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGCCCATGTCTAGGATGCATGTGAGTCATACTTGCCATCTAGAAG  999

seq1  AAATCCTTCATG-CTTGAAAGGGG-CTAGAAACTCTTGTCTAT--CTATA  1043
      |||||||||||| ||||||||||| ||||||||||||||||||   ||||
seq2  AAATCCTTCATGCCTTGAAAGGGGCCTAGAAACTCTTGTCTATTCTTATA  1049

seq1  GGGTCTT--GTCTAATTAACTAGAAG-ACACAGTGTTTGTT---GTGTGG  1087
      |||||||   ||||||| |||||||| ||||||||||||||   ||||||
seq2  GGGTCTTTGTTCTAATT-ACTAGAAGAACACAGTGTTTGTTTGGGTGTGG  1098

seq1  -CAAGTGAAGCTAAAAGATTTTGATAAACTTTTTGCACTGT-CTTAGCT-  1134
       |||||| |||| |||||||||||| |||  |||||||||| ||||||| 
seq2  CCAAGTG-AGCT-AAAGATTTTGATTAAC-CTTTGCACTGTCCTTAGCTG  1145

seq1  GAAAC  1139
      |||||
seq2  GAAAC  1150