BAC Information

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BAC

Clone NameB6Ng01-287A07
Chromosome7 (Build37)
Map Location 25,634,320 - 25,635,562
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936
Downstream geneLOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287A07.b
ACCGA085059
length1,231
definitionB6Ng01-287A07.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagttctgccaaggctacacagagtaacaacccaaactcctaaa
aaacaaccactgaacaacacatttaaaatatatatagtatatataaaaat
aacatataagccgggcggtggtggtacacgcccttaatcccagcacttgg
aaagcagaggcaggtggatttctgagctcgaggccagcctggtctacagt
gtgagttccaggacagccagggctacacagagaaaccctgtcttgaaaaa
tcaatcaatcaatcaatcaatcaatcaatcaataaaacatctaaaccaat
ctcgagctacataatcaaagcttgcgaccagcatctcacctgaacactta
atgtacttattacagtgctgtggtaataaaaactggcgtcacatacaggc
tggagggatggctgagtcctgctgtttgcggctcacatagaagacctgag
tttgactcctggcacccacaaggtgactcacaattatccataaccccagg
tcacataggtccaacaggcacgcagtgctagttatacatgcatgcaagtg
aaacatttatacacatagtgtaaaataaatactttccattctttaaaaaa
ataatccaggtggtgcacacctttaattccagcacttgaaaggtagaggc
aggtggatctctaagtttggggacagcctggtctacagagtgagttccaa
gatagccacacacagagaaaacttgtctcaaaaagcaaacaaacaaacaa
gattcacatacagacgaaagaaatacaactaagtcaataagtgaataaaa
ctctggtcatatgacctttgacacgtgtttgtcacttgtcaaattcatga
gggaaaacaggttttccagaaaacacagttttctggaaactgctctctta
cagagcaatgagcctagtagaagcataaacacccacacctacgcatacca
tgcagccaaatgcatacttgtgagatcagagagagacaggaggactgaga
agacatgctgcagaggcacacagccccacgcaggcaatgctcatcgcgtt
gcatgagtctggctgcatctgtgagccaggcacctcactgtggaaggtct
cttgcacgtccagcgtgccactcttctattggcttggaatagagactcca
gctgtttctgtagattccaaggttcagaattcagctaggtactagcctaa
ctctggcaatgtggacatttctgcttttctt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25634320_25635562
seq2: B6Ng01-287A07.b_43_1273

seq1  GAATTCCAGTTCTGCCAAGGCTACACAGAGTAACAACCCAAACTCCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTCTGCCAAGGCTACACAGAGTAACAACCCAAACTCCTAAA  50

seq1  AAACAACCACTGAACAACACATTTAAAATATATATAGTATATATAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACCACTGAACAACACATTTAAAATATATATAGTATATATAAAAAT  100

seq1  AACATATAAGCCGGGCGGTGGTGGTACACGCCCTTAATCCCAGCACTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATAAGCCGGGCGGTGGTGGTACACGCCCTTAATCCCAGCACTTGG  150

seq1  AAAGCAGAGGCAGGTGGATTTCTGAGCTCGAGGCCAGCCTGGTCTACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAGGCAGGTGGATTTCTGAGCTCGAGGCCAGCCTGGTCTACAGT  200

seq1  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAA  250

seq1  TCAATCAATCAATCAATCAATCAATCAATCAATAAAACATCTAAACCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAATCAATCAATCAATCAATCAATCAATAAAACATCTAAACCAAT  300

seq1  CTCGAGCTACATAATCAAAGCTTGCGACCAGCATCTCACCTGAACACTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGCTACATAATCAAAGCTTGCGACCAGCATCTCACCTGAACACTTA  350

seq1  ATGTACTTATTACAGTGCTGTGGTAATAAAAACTGGCGTCACATACAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTTATTACAGTGCTGTGGTAATAAAAACTGGCGTCACATACAGGC  400

seq1  TGGAGGGATGGCTGAGTCCTGCTGTTTGCGGCTCACATAGAAGACCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGATGGCTGAGTCCTGCTGTTTGCGGCTCACATAGAAGACCTGAG  450

seq1  TTTGACTCCTGGCACCCACAAGGTGACTCACAATTATCCATAACCCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTCCTGGCACCCACAAGGTGACTCACAATTATCCATAACCCCAGG  500

seq1  TCACATAGGTCCAACAGGCACGCAGTGCTAGTTATACATGCATGCAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAGGTCCAACAGGCACGCAGTGCTAGTTATACATGCATGCAAGTG  550

seq1  AAACATTTATACACATAGTGTAAAATAAATACTTTCCATTCTTTAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTATACACATAGTGTAAAATAAATACTTTCCATTCTTTAAAAAA  600

seq1  ATAATCCAGGTGGTGCACACCTTTAATTCCAGCACTTGAAAGGTAGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCAGGTGGTGCACACCTTTAATTCCAGCACTTGAAAGGTAGAGGC  650

seq1  AGGTGGATCTCTAAGTTTGGGGACAGCCTGGTCTACAGAGTGAGTTCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATCTCTAAGTTTGGGGACAGCCTGGTCTACAGAGTGAGTTCCAA  700

seq1  GATAGCCACACACAGAGAAAACTTGTCTCAAAAAGCAAACAAACAAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCACACACAGAGAAAACTTGTCTCAAAAAGCAAACAAACAAACAA  750

seq1  GATTCACATACAGACGAAAGAAATACAACTAAGTCAATAAGTGAATAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACATACAGACGAAAGAAATACAACTAAGTCAATAAGTGAATAAAA  800

seq1  CTCTGGTCATATGACCTTTGACACGTGTTTGTCACTTGTCAAATTCGTGA  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCTGGTCATATGACCTTTGACACGTGTTTGTCACTTGTCAAATTCATGA  850

seq1  GGGAAAACAGGTTTTCCAGAAAACACAG-TTTCTGGAAACTGCTCTCTTA  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGGAAAACAGGTTTTCCAGAAAACACAGTTTTCTGGAAACTGCTCTCTTA  900

seq1  CAGAGCAATGAGCCTAGTAGAAGCATAAACACCCCACACCTACGCATACC  949
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGAGCAATGAGCCTAGTAGAAGCATAAACA-CCCACACCTACGCATACC  949

seq1  ATGCAAGCCAAAGGCATACTTGTGAGATCAGAAGAGAGACAGGAGGGACT  999
      |||| ||||||| |||||||||||||||||| |||||||||||| |||||
seq2  ATGC-AGCCAAATGCATACTTGTGAGATCAG-AGAGAGACAGGA-GGACT  996

seq1  GAAGAAGACATGCTGCAGAGGCACACAGCCCC-CGCAGGCAATGCTCATC  1048
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  G-AGAAGACATGCTGCAGAGGCACACAGCCCCACGCAGGCAATGCTCATC  1045

seq1  GCGTTTGCATGAGTCCTGGCTGCATCTGTGAG-CAGGCACCTCACTGTGG  1097
      ||| |||||||||| ||||||||||||||||| |||||||||||||||||
seq2  GCG-TTGCATGAGT-CTGGCTGCATCTGTGAGCCAGGCACCTCACTGTGG  1093

seq1  AAAGTCTC-TGCACGGTCACAGC-TGC--CTCTCCTATTGGCTTTTGGAA  1143
      || ||||| ||||| ||| |||| |||  |||| ||||||||  ||||||
seq2  AAGGTCTCTTGCAC-GTC-CAGCGTGCCACTCTTCTATTGGC--TTGGAA  1139

seq1  ATGAGACTCCAGCTGTTTCTGTAAGATCACAAGTCACAAGACTCCAGCTC  1193
        |||||||||||||||||||| ||||  ||||   | ||| | |||  |
seq2  TAGAGACTCCAGCTGTTTCTGT-AGATTCCAAGGTTC-AGAATTCAG--C  1185

seq1  TAGGTGACTAGAGGCTAACTACTGAC-ATGTGGACATTTCTGCCTTTTCT  1242
      ||||| |||  || |||||| ||| | ||||||||||||||| |||||||
seq2  TAGGT-ACT--AGCCTAACT-CTGGCAATGTGGACATTTCTG-CTTTTCT  1230

seq1  T  1243
      |
seq2  T  1231