BAC Information

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BAC

Clone NameB6Ng01-287M14
Chromosome7 (Build37)
Map Location 3,163,640 - 3,164,756
singlet/doubletsinglet
Overlap geneAU018091
Upstream geneLOC100041028, LOC627003, EG664817, Speer9-ps1
Downstream geneLOC100041503, Nlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287M14.bB6Ng01-287M14.g
ACCGA085615GA085616
length8921,098
definitionB6Ng01-287M14.b B6Ng01-287M14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactctgtagtccaggctggcctctaactgcaggctaacaagctg
cagatattaagactcattgtagccgggtggtggtggctcaagcctttaat
cccagcacttgggaggcagaggcaggtggatttctgaattctaggccagc
ctggtctacagagtgagttccgggacagccagtactacacagagaaaccc
tgtctcaaaaaacaaaaaaaaaaaaaaagactcattgtcacaaaagatgt
gtagcttttggggccacttctagaaatttggcaggaatttgacattgggc
ccttgacaaggaagtaggcttcaggcaagaatttgactttgggctaggac
agggaagtaggctcagactttgtgctcatcctgataagcccctagaaaca
gtgatcctggaacttggtttattacactgtttgttccttgactatttgtg
tttattgtcttgctggttccttaacctagaactgaccttattacttccat
gtaagcctggcggtggtggcacacgcctttaatcccagcacttaggaggc
agagccaggcagatttctgagttagaggtcaacctggtctacagagtaag
tcccaggagagccagggctacacagagaaatcctgtctcaaaaaccagaa
aaaaaaaaaaatggtaaaaaaataaataaataaaccctcctcagcctcag
aactgcctggggtcatgctacagtgttgtctaattgccttttttcttttt
aatcctcattcctaccctggagaacctgttgacagactgagctgacttgg
tcaaagatgcgttcttttttttttttttaaggatttatttacctattata
tgtaagtacactgtagctgtcttcagacatttcagaagaggg
gaattcctggcaggctgagtgtggtgaagtagaagcatgtatatcaggga
tttgaggccttcttctgttatatatatagcaaggtcaaggacagcctgag
ctacatgagaccctgtattcataaaaatgaaacaaggagtcccgtgatcc
catttttaggaggtagaggcaaaattcaggtcattctcagttaacataga
gagttcaagaccaacctggcctacttatataaaaccctgcccccatctcc
tcaccaatgacatagttgagtattaagttccagccagtgatgaaagccaa
cagctggcccactgtgacatagctgtagagatatgcggaacccgagcatg
gtaccctggccccaaactccgcataacagagtcctgacatcactgaagac
agggcagcaattaagaagcagatgatgatggacggtccagctttctctct
ggccacctccccggccaggacatacacgcctgcacccagggtactgccca
cacccaaggacaccaggtccaaagtggtcagacatcgagacaaggaagac
tcagactgttcgtttgccgccaggggccgccggcgaaccaacttctggcc
aaactgatggaggttctgccataacatctttagtgcctggtggagggatc
caaactctgctggaaaacaagatgagaaatcttgaataatcacctgacag
ggtgtggtggtttatgcctttaattcaagcacttgggcgttgtttttaac
aaaatctcaaccgttgtattttaccaatgaagactctctagagccagatg
ctggggtgaaagcctgctagctcagagaggcagagaaagcacccagctca
ctttccttctcagacctcgtcccagaatgaatcccctccctcaagcccat
ctccaaaacacctccttcaactcaggtccctcccttctacttccggtatg
tctctctatcagccttctgactccctcgtaactctatggttttttcttta
aatcctatgttcactcctgtcacggctgactctatcagttaaatgttcag
cagaaactctgattaaagtataggactgaccaggggctggtgaaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_3163640_3164756
seq2: B6Ng01-287M14.g_65_1162

seq1  GAATTCCTGGCAGGCTGAGTGTGGTGAAGTAGAAGCATGTATATCAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGCAGGCTGAGTGTGGTGAAGTAGAAGCATGTATATCAGGGA  50

seq1  TTTGAGGCCTTCTTCTGTTATATATATAGCAAGGTCAAGGACAGCCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCCTTCTTCTGTTATATATATAGCAAGGTCAAGGACAGCCTGAG  100

seq1  CTACATGAGACCCTGTATTCATAAAAATGAAACAAGGAGTCCCGTGATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGAGACCCTGTATTCATAAAAATGAAACAAGGAGTCCCGTGATCC  150

seq1  CATTTTTAGGAGGTAGAGGCAAAATTCAGGTCATTCTCAGTTAACATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAGGAGGTAGAGGCAAAATTCAGGTCATTCTCAGTTAACATAGA  200

seq1  GAGTTCAAGACCAACCTGGCCTACTTATATAAAACCCTGCCCCCATCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAAGACCAACCTGGCCTACTTATATAAAACCCTGCCCCCATCTCC  250

seq1  TCACCAATGACATAGTTGAGTATTAAGTTCCAGCCAGTGATGAAAGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAATGACATAGTTGAGTATTAAGTTCCAGCCAGTGATGAAAGCCAA  300

seq1  CAGCTGGCCCACTGTGACATAGCTGTAGAGATATGCGGAACCCGAGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGCCCACTGTGACATAGCTGTAGAGATATGCGGAACCCGAGCATG  350

seq1  GTACCCTGGCCCCAAACTCCGCATAACAGAGTCCTGACATCACTGAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCTGGCCCCAAACTCCGCATAACAGAGTCCTGACATCACTGAAGAC  400

seq1  AGGGCAGCAATTAAGAAGCAGATGATGATGGACGGTCCAGCTTTCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGCAATTAAGAAGCAGATGATGATGGACGGTCCAGCTTTCTCTCT  450

seq1  GGCCACCTCCCCGGCCAGGACATACACGCCTGCACCCAGGGTACTGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCTCCCCGGCCAGGACATACACGCCTGCACCCAGGGTACTGCCCA  500

seq1  CACCCAAGGACACCAGGTCCAAAGTGGTCAGACATCGAGACAAGGAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAAGGACACCAGGTCCAAAGTGGTCAGACATCGAGACAAGGAAGAC  550

seq1  TCAGACTGTTCGTTTGCCGCCAGGGGCCGCCGGCGAACCAACTTCTGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTGTTCGTTTGCCGCCAGGGGCCGCCGGCGAACCAACTTCTGGCC  600

seq1  AAACTGATGGAGGTTCTGCCATAACATCTTTAGTGCCTGGTGGAGGGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGATGGAGGTTCTGCCATAACATCTTTAGTGCCTGGTGGAGGGATC  650

seq1  CAAACTCTGCTGGAAAACAAGATGAGAAATCTTGAATAATCACCTGACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTGCTGGAAAACAAGATGAGAAATCTTGAATAATCACCTGACAG  700

seq1  GGTGTGGTGGTTTATGCCTTTAATTCAAGCACTTGGGCGTTGTTTTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGTGGTTTATGCCTTTAATTCAAGCACTTGGGCGTTGTTTTTAAC  750

seq1  AAAATCTCAACCGTTGTATTTTACCAATGAAGACTCTCTAGAGCCAGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTCAACCGTTGTATTTTACCAATGAAGACTCTCTAGAGCCAGATG  800

seq1  CTGGGGTGAAAGCCTGCTAGCTCAGAGAGGCAGAGAAAGCACCCAGCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTGAAAGCCTGCTAGCTCAGAGAGGCAGAGAAAGCACCCAGCTCA  850

seq1  CTTTCCTTCTCAGACCTCGTCCCAGAATGAATCCCCTCCCTCAAGCCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTCTCAGACCTCGTCCCAGAATGAATCCCCTCCCTCAAGCCCAT  900

seq1  CTCCAAAACACCTCCTTCAAACTCAGGTCCCTCCCTTCTACTTCCGGTAT  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTCCAAAACACCTCCTTC-AACTCAGGTCCCTCCCTTCTACTTCCGGTAT  949

seq1  GTCTCTCTATCAGCCCTTCTGACTCCCTCGTAAACTCTATGGTTTTTTCT  1000
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  GTCTCTCTATCAG-CCTTCTGACTCCCTCGT-AACTCTATGGTTTTTTCT  997

seq1  TTAAAATCCTATGTTCACTTCCTGTCAACGGGCTGACTCTAATCCAGTTT  1050
      || ||||||||||||||| ||||||||   |||||||||||   ||||| 
seq2  TT-AAATCCTATGTTCAC-TCCTGTCA--CGGCTGACTCTA--TCAGTT-  1040

seq1  AAAATGTTCAAGCAGAAAACTCTTGGATTAAAGGTATTAAGACTGAGCCA  1100
       |||||||| ||||| |||||||  ||||||| ||| || |||||| |||
seq2  -AAATGTTC-AGCAG-AAACTCT--GATTAAA-GTA-TAGGACTGA-CCA  1082

seq1  GGGGGCTGGTGAGATGG  1117
       ||||||||||| ||||
seq2  -GGGGCTGGTGAAATGG  1098