BAC Information

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BAC

Clone NameB6Ng01-287P10
Chromosome7 (Build37)
Map Location 15,609,488 - 15,610,539
singlet/doubletsinglet
Overlap geneLOC100042685
Upstream geneEG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677
Downstream geneEG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3, LOC100042771, Obox5, EG638338, Obox6, Crx, Crxos1, Sepw1, Gltscr2, Ehd2, Gltscr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287P10.bB6Ng01-287P10.g
ACCGA085750GA085751
length1,2161,054
definitionB6Ng01-287P10.b B6Ng01-287P10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatgtttaatggggttatttggttt
tctggagcccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttgagataggtaaagattctttaccaatctgttggtggtctt
tttttcttattgacagtgtcttttaccttgcaggagctttacaattttat
gaggtcccatttatcgattctcgatcttacagcacaagccattgctgttc
tatacaggcatttttcccctgtacccatatcttcgaggcttttccctatt
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaagtagatagaaatggataaattcgca
ttttctatatgataaccgcaagttgtgccagcaccatttgttgaaaatga
tgtcctttttccactggatggttttagctcccttgtcaaagattaagtga
ccataggtgtgtgggttcatctctgggtcttcaattctgttccattggtc
tacttgtctgtcaatataccagtgccatgcagtttttatcacaattgctc
tgtagtacagctttaagtcaggcatggtgattccaccagaggttctttta
tccttgaaaagagtttttgctatcctaggttttttgttatttcagatgaa
tctgctgattgccctttctaattcgttgaagaattgagttggaattttga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
acaatgttgatcctgccagtccatgagcatgggaggtatttccatcttca
gagatcttctttaatttctttcttcaggatatgaagtttttatcatacag
atctttcactttccttagatagagtcaggccaaggtattttatattattt
gtaactattgagaagggtgttgcttccctaaatttctttctcagcctgtt
tatcctttgtgtaagaagaaaggccattgacttgtttgagttaatttaat
attcgagctactcaccgaagctgtttatcaagcttaaggaggtctctgtg
tatttttaaggaatccacttatgttataactaatcattatccatcttaca
aatggaatttggaacttcacttttccgattgtaatcctgtatatctcctt
gggtgctctcataatg
gaattcctggtgaggggagttccttgatggtctaaactcaggaggatagc
tgacatccacatgtctctggcacacagaatctggactggcagcgaaatca
ggaacttcaccaccactgcaggaagtaggcctatagtgaggtccacttcc
aattctccgagggagttgtgaactcttccgatattctttacctggtctgt
tcttgaaccaggtctggaaaacaaaggagacatcagaggaatacctgatt
gcccctaacgggaccacaggttgaagcctttagatgggaggtgtttttat
agccatagaaactgcatgaggcagaaacagagaagtctgaggctctaaat
cccaaagagatcgcagtaaggtaggatgtatatgacttggcaccaaaatc
tggggaagattcaggtagtgtgtcctgtgtcttagtagaagccgtggtgt
atgggtctctaagaccctgcaggaaaataatcttgacccaaaatggtacc
aggtcaaaacagaatgggaggtccacccctagagggctgaatatccacca
ttcacaaatctccaaggtgcccttagcacataagaagcacggagttcagg
taattgattgaggaagagccccttttggtgttgaacagagggaaaagaga
gaggcatacctggatcttgtattctgtcacaccaatcattaatgccattg
ccttccgttgttccaggtctgggttctggcactgatgaaaatgttcttgc
agcagacacttttgttctttggagtacacggtgcgttcctttcgaacctt
tcttgggagccacagggccagatttgtttgttataatatttatcagacaa
tggcatagaacctatggggaacagggaaaccagaactcactgagggtctt
gaaagtatctgatgacttggctgcctgagagtcttctcagagttggtaaa
cctgggcccatgacaacactgtttgcattcgcatacctgagtttctggat
gttcttggacttcttttctgatgtaaggtcctttcatggaactgaatgac
ttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15609488_15610539
seq2: B6Ng01-287P10.g_67_1120 (reverse)

seq1  TCAAGTCATTCAG-TCCATGAAAGGGACCTACATCAG-AAAGAGTCCCAA  48
      ||||||||||||| |||||||||||  | |||||||| |||||   ||||
seq2  TCAAGTCATTCAGTTCCATGAAAGGACCTTACATCAGAAAAGAAGTCCAA  50

seq1  GAACCATCCAGAAACTCAGGTATGCGAATGCAAACAAGTGTTGTCATGGG  98
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAA-CATCCAGAAACTCAGGTATGCGAATGCAAAC-AGTGTTGTCATGGG  98

seq1  CCCAGGTTTACCAACTCTGAGAAGACTCTCAGGGCAGCCAAGTCATCAGA  148
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCAGGTTTACCAACTCTGAGAAGACTCTCA-GGCAGCCAAGTCATCAGA  147

seq1  TACTTTCAAGACCCTCAGTGAGTTCTGGTTTCCCTGTT-CCCATAGGTTC  197
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TACTTTCAAGACCCTCAGTGAGTTCTGGTTTCCCTGTTCCCCATAGGTTC  197

seq1  TATGCCATTGTCTGATAAATATTATAACAAAC-AATCTGGCCCTGTGGCT  246
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATGCCATTGTCTGATAAATATTATAACAAACAAATCTGGCCCTGTGGCT  247

seq1  -CCAAGAAAGGTTCGAAAGGAACGCACCGTGTACTCCAAAGAACAAAAGT  295
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGAAAGGTTCGAAAGGAACGCACCGTGTACTCCAAAGAACAAAAGT  297

seq1  GTCTGCTGCAAGAACATTTTCATCAGTGCCAGAACCCAGACCTGGAACAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTGCAAGAACATTTTCATCAGTGCCAGAACCCAGACCTGGAACAA  347

seq1  CGGAAGGCAATGGCATTAATGATTGGTGTGACAGAATACAAGATCCAGGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGGCAATGGCATTAATGATTGGTGTGACAGAATACAAGATCCAGGT  397

seq1  ATGCCTCTCTCTTTTCCCTCTGTTCAACACCAAAAGGGGCTCTTCCTCAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCTCTCTTTTCCCTCTGTTCAACACCAAAAGGGGCTCTTCCTCAA  447

seq1  TCAATTACCTGAACTCCGTGCTTCTTATGTGCTAAGGGCACCTTGGAGAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACCTGAACTCCGTGCTTCTTATGTGCTAAGGGCACCTTGGAGAT  497

seq1  TTGTGAATGGTGGATATTCAGCCCTCTAGGGGTGGACCTCCCATTCTGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAATGGTGGATATTCAGCCCTCTAGGGGTGGACCTCCCATTCTGTT  547

seq1  TTGACCTGGTACCATTTTGGGTCAAGATTATTTTCCTGCAGGGTCTTAGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTGGTACCATTTTGGGTCAAGATTATTTTCCTGCAGGGTCTTAGA  597

seq1  GACCCATACACCACGGCTTCTACTAAGACACAGGACACACTACCTGAATC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCATACACCACGGCTTCTACTAAGACACAGGACACACTACCTGAATC  647

seq1  TTCCCCAGATTTTGGTGCCAAGTCATATACATCCTACCTTACTGCGATCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGATTTTGGTGCCAAGTCATATACATCCTACCTTACTGCGATCT  697

seq1  CTTTGGGATTTAGAGCCTCAGACTTCTCTGTTTCTGCCTCATGCAGTTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGATTTAGAGCCTCAGACTTCTCTGTTTCTGCCTCATGCAGTTTC  747

seq1  TATGGCTATAAAAACACCTCCCATCTAAAGGCTTCAACCTGTGGTCCCGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTATAAAAACACCTCCCATCTAAAGGCTTCAACCTGTGGTCCCGT  797

seq1  TAGGGGCAATCAGGTATTCCTCTGATGTCTCCTTTGTTTTCCAGACCTGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCAATCAGGTATTCCTCTGATGTCTCCTTTGTTTTCCAGACCTGG  847

seq1  TTCAAGAACAGACCAGGTAAAGAATATCGGAAGAGTTCACAACTCCCTCG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAACAGACCAGGTAAAGAATATCGGAAGAGTTCACAACTCCCTCG  897

seq1  GAGAATTGGAAGTGGACCTCACTATAGGCCTACTTCCTGCAGTGGTGGTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGGAAGTGGACCTCACTATAGGCCTACTTCCTGCAGTGGTGGTG  947

seq1  AAGTTCCTGATTTCGCTGCCAGTCCAGATTCTGTGTGCCAGAGACATGTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTGATTTCGCTGCCAGTCCAGATTCTGTGTGCCAGAGACATGTG  997

seq1  GATGTCAGCTATCCTCCTGAGTTTAGACCATCAAGGAACTCCCCTCACCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAGCTATCCTCCTGAGTTTAGACCATCAAGGAACTCCCCTCACCA  1047

seq1  GGAATTC  1052
      |||||||
seq2  GGAATTC  1054