BAC Information

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BAC

Clone NameB6Ng01-288J09
Chromosome7 (Build37)
Map Location 114,077,748 - 114,218,385
singlet/doubletdoublet
Overlap geneOlfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714
Upstream geneLOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1
Downstream geneOlfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288J09.bB6Ng01-288J09.g
ACCGA086211GA086212
length9721,096
definitionB6Ng01-288J09.b B6Ng01-288J09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,077,748 - 114,078,391)(114,217,274 - 114,218,385)
sequence
gaattcaatgcaagtttgtctgcaaggacattcataagttcatgctgcat
atctctctcattgagtttttttatagaatcattcttatctcaaagctggg
tttttttttctttttctttttatttattttttaattaggtattttctttc
tttttaaaaatatttttattaggtattttcctcatttacatttccagtgc
tataccaaaagtcacccataccctcccctcccactaccctacagacccac
tcccctaccgacccactcccacttcttggtcctggcattcccctatactg
aggcatataaagtttgcacaaccaatgggcctctctttccactaatggcc
aactaggccatcttctgatacatattcagctggagacacgagctccaggg
gttattggttagttcatattgttgttccacctatagggttgcagattcct
ttagctccttgggtactttctctagctccacctttgggggccctgtgatc
catccaattgctgactgcgagcatccacttatgtgtttgctagtccccgg
cctagtctcacaagagacagctacatctgggtcctttcaacaaaatcttg
ctagtgtatgcgatcatgtcagcgtttggaggctgattatgggatggatc
cccagatatggcagtctctagatggtccatccttttgtctcagctccaaa
ctttgtctctgtaactccttccatgggtgttttgttcccaattctaagaa
ggggcaaagtgtccacactttggtctgcattattcttgagtttcatgagt
ttcacaaattgtatcttatatcttgggtattctaagtatctgggttaaca
tccacatatcagtgagtacttatcatgtgagttcttttgactgggttacc
tcactcaggatgatgccctccaggtccatccatttgcctaggaacttcat
aaatttcattctttttaatagc
gaattcattacaatagagatcaatgggtagatatgaacaacaaatatatg
ctctccatttaacaaatattaaccttaccttttaatatctacaggataaa
ttttctgagggccagggccttgtggaaagttctgctgagtgcatttttca
cttcattatttctcagactatagataatggggttcaacagaggagtcaca
acagtgtaggacagtgataacaatttcttgctttcaggagaattctttga
tttaggtctaaagtaagtgaggcttaacgacacatagaaaagagagacaa
cgacgagatgtgaggaacaggtggagaaggctttgtgtttccctttagct
gatggaatcttgaggatggaagctgcaatgagagtgtatgaacataggat
cagcaggcagggtatcatgacaaccagaatagtcccaacaatggcataga
cctcaaaccgggctgtgtctgcacagaccagcctcagcacaggtgggctg
tcacagaagaagtgattcaccttgttgttggcacagaatggaaaactgaa
gagccatgtggtctgcacagtggctacaggaaaccctggaaaccaggagg
cagcagccagtctggcacgtgtcccttggttcatgatgattgggtaatgc
aagggactgcagatggccacatagcggtcatatgccatggtggcgaggag
gaagcactcggccactccaaagaagaagaagaaatacatctgagtggcac
agcccaggaaggagatgcttgtgtcctgggcaatcagagtcctcaacatt
ttgggcagaatgactaggttgaagccgatctccatgaaggataagttcct
gagaaagaaatacatggggctttgcagcatggggtcagcccaaggtcacc
agaatgatgaggctgtttcccagcagagtaaccaggtagatggtgagaaa
tgccaggagagcagtctgtatctcagtaggtaggaagagagccatgagat
aatcagctattcttgtctgtttctgcagcatgcatatacccccaatctct
gtgtattaaagacggattcttgagtacagaatccgagtctgattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_114077748_114078391
seq2: B6Ng01-288J09.b_50_693

seq1  GAATTCAATGCAAGTTTGTCTGCAAGGACATTCATAAGTTCATGCTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCAAGTTTGTCTGCAAGGACATTCATAAGTTCATGCTGCAT  50

seq1  ATCTCTCTCATTGAGTTTTTTTATAGAATCATTCTTATCTCAAAGCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCTCATTGAGTTTTTTTATAGAATCATTCTTATCTCAAAGCTGGG  100

seq1  TTTTTTTTTCTTTTTCTTTTTATTTATTTTTTAATTAGGTATTTTCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTTTTTCTTTTTATTTATTTTTTAATTAGGTATTTTCTTTC  150

seq1  TTTTTAAAAATATTTTTATTAGGTATTTTCCTCATTTACATTTCCAGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAATATTTTTATTAGGTATTTTCCTCATTTACATTTCCAGTGC  200

seq1  TATACCAAAAGTCACCCATACCCTCCCCTCCCACTACCCTACAGACCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAAAAGTCACCCATACCCTCCCCTCCCACTACCCTACAGACCCAC  250

seq1  TCCCCTACCGACCCACTCCCACTTCTTGGTCCTGGCATTCCCCTATACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACCGACCCACTCCCACTTCTTGGTCCTGGCATTCCCCTATACTG  300

seq1  AGGCATATAAAGTTTGCACAACCAATGGGCCTCTCTTTCCACTAATGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATATAAAGTTTGCACAACCAATGGGCCTCTCTTTCCACTAATGGCC  350

seq1  AACTAGGCCATCTTCTGATACATATTCAGCTGGAGACACGAGCTCCAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGCCATCTTCTGATACATATTCAGCTGGAGACACGAGCTCCAGGG  400

seq1  GTTATTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATTCCT  450

seq1  TTAGCTCCTTGGGTACTTTCTCTAGCTCCACCTTTGGGGGCCCTGTGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCCTTGGGTACTTTCTCTAGCTCCACCTTTGGGGGCCCTGTGATC  500

seq1  CATCCAATTGCTGACTGCGAGCATCCACTTATGTGTTTGCTAGTCCCCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAATTGCTGACTGCGAGCATCCACTTATGTGTTTGCTAGTCCCCGG  550

seq1  CCTAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAACAAAATCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAACAAAATCTTG  600

seq1  CTAGTGTATGCGATCATGTCAGCGTTTGGAGGCTGATTATGGGA  644
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTATGCGATCATGTCAGCGTTTGGAGGCTGATTATGGGA  644

seq1: chr7_114217274_114218385
seq2: B6Ng01-288J09.g_66_1161 (reverse)

seq1  AGAATCCAGACTCTGATTTCTGTACTCAAGAATCTGTCTTTATAACCACA  50
      ||||| ||||||| || ||||||||||||||||| ||||||| |  ||||
seq2  AGAAT-CAGACTCGGA-TTCTGTACTCAAGAATCCGTCTTTA-ATACACA  47

seq1  GGAGATTTGGGGGTATATGCATGGCTGCAGGAAACCAGACAAGAATAGCT  100
       |||| |||||||||||||||| |||||||  || |||||||||||||||
seq2  -GAGA-TTGGGGGTATATGCAT-GCTGCAG--AAACAGACAAGAATAGCT  92

seq1  GAATTTATCCTCATGGGCTTCTCTTCCCTACCTACTGAGATACAGACCTT  150
      ||  |||| |||||||   |||||| |||||||||||||||||||||  |
seq2  GA--TTAT-CTCATGG--CTCTCTT-CCTACCTACTGAGATACAGAC--T  134

seq1  GCTCTTCCTGGCATTTCTCACCATCTACCTGGTTACTCTGCTGGGAAACA  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTC-TCCTGGCATTTCTCACCATCTACCTGGTTACTCTGCTGGGAAACA  183

seq1  GCCTCATCATTCTGGTGACCTT-GGCTGACCCCATGCTGCAAAGCCCCAT  249
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCCTCATCATTCTGGTGACCTTGGGCTGACCCCATGCTGCAAAGCCCCAT  233

seq1  GTATTTCTTTCTCAGGAACTTATCCTTCATGGAGATCGGCTTCAACCTAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCTTTCTCAGGAACTTATCCTTCATGGAGATCGGCTTCAACCTAG  283

seq1  TCATTCTGCCCAAAATGTTGAGGACTCTGATTGCCCAGGACACAAGCATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTGCCCAAAATGTTGAGGACTCTGATTGCCCAGGACACAAGCATC  333

seq1  TCCTTCCTGGGCTGTGCCACTCAGATGTATTTCTTCTTCTTCTTTGGAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTGGGCTGTGCCACTCAGATGTATTTCTTCTTCTTCTTTGGAGT  383

seq1  GGCCGAGTGCTTCCTCCTCGCCACCATGGCATATGACCGCTATGTGGCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGAGTGCTTCCTCCTCGCCACCATGGCATATGACCGCTATGTGGCCA  433

seq1  TCTGCAGTCCCTTGCATTACCCAATCATCATGAACCAAGGGACACGTGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGTCCCTTGCATTACCCAATCATCATGAACCAAGGGACACGTGCC  483

seq1  AGACTGGCTGCTGCCTCCTGGTTTCCAGGGTTTCCTGTAGCCACTGTGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGCTGCTGCCTCCTGGTTTCCAGGGTTTCCTGTAGCCACTGTGCA  533

seq1  GACCACATGGCTCTTCAGTTTTCCATTCTGTGCCAACAACAAGGTGAATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACATGGCTCTTCAGTTTTCCATTCTGTGCCAACAACAAGGTGAATC  583

seq1  ACTTCTTCTGTGACAGCCCACCTGTGCTGAGGCTGGTCTGTGCAGACACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTCTGTGACAGCCCACCTGTGCTGAGGCTGGTCTGTGCAGACACA  633

seq1  GCCCGGTTTGAGGTCTATGCCATTGTTGGGACTATTCTGGTTGTCATGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGTTTGAGGTCTATGCCATTGTTGGGACTATTCTGGTTGTCATGAT  683

seq1  ACCCTGCCTGCTGATCCTATGTTCATACACTCTCATTGCAGCTTCCATCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCCTGCTGATCCTATGTTCATACACTCTCATTGCAGCTTCCATCC  733

seq1  TCAAGATTCCATCAGCTAAAGGGAAACACAAAGCCTTCTCCACCTGTTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTCCATCAGCTAAAGGGAAACACAAAGCCTTCTCCACCTGTTCC  783

seq1  TCACATCTCGTCGTTGTCTCTCTTTTCTATGTGTCGTTAAGCCTCACTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTCGTCGTTGTCTCTCTTTTCTATGTGTCGTTAAGCCTCACTTA  833

seq1  CTTTAGACCTAAATCAAAGAATTCTCCTGAAAGCAAGAAATTGTTATCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGACCTAAATCAAAGAATTCTCCTGAAAGCAAGAAATTGTTATCAC  883

seq1  TGTCCTACACTGTTGTGACTCCTCTGTTGAACCCCATTATCTATAGTCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTACACTGTTGTGACTCCTCTGTTGAACCCCATTATCTATAGTCTG  933

seq1  AGAAATAATGAAGTGAAAAATGCACTCAGCAGAACTTTCCACAAGGCCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAATGAAGTGAAAAATGCACTCAGCAGAACTTTCCACAAGGCCCT  983

seq1  GGCCCTCAGAAAATTTATCCTGTAGATATTAAAAGGTAAGGTTAATATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCAGAAAATTTATCCTGTAGATATTAAAAGGTAAGGTTAATATTT  1033

seq1  GTTAAATGGAGAGCATATATTTGTTGTTCATATCTACCCATTGATCTCTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATGGAGAGCATATATTTGTTGTTCATATCTACCCATTGATCTCTA  1083

seq1  TTGTAATGAATTC  1112
      |||||||||||||
seq2  TTGTAATGAATTC  1096