BAC Information

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BAC

Clone NameB6Ng01-289K02
Chromosome7 (Build37)
Map Location 148,658,472 - 148,786,934
singlet/doubletdoublet
Overlap genePolr2l, Tspan4, Chid1, Ap2a2
Upstream geneOlfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151
Downstream geneMuc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289K02.bB6Ng01-289K02.g
ACCGA086974GA086975
length1,1461,141
definitionB6Ng01-289K02.b B6Ng01-289K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,658,472 - 148,659,604)(148,785,791 - 148,786,934)
sequence
gaattccaggatagtcaaggccaaacagagaaaccctgtcttggaaaatg
aaaggtaaataaatctgggtttgattcccaatacctgatggcagcttata
cattctataactttactctcaggggatctggcctctgtggggacacagtg
atacaaagacttataagcagaccaaatacccaaatgcataataaccctag
cacaaggattgggacctccaagcacgctcagcattccaaaggaatattgt
caccaggcttgggcccatccatacctgtggatggtgtggtgcccacatcc
attatgcccatcctgaacacaggcaggaagcggagaggccctaaagcaat
gtggtacaagactactgtagggctacctcgttgatcaaagtggtcaaggc
cccggggaacggaagcagggtactcctccacaggacgagactcccagtca
gatgaaggggaaggagaccagccctaggggaaagactggaggcaggccag
gtagcctcagagacagcacagacatggacatggagcaccttggaagttag
acctgttggtggttctgcaaacatctttactaaacagttccttccagggt
aacaggacttagccacagggccacagccaggcaatacaccaacatcccca
atagctcagtttgaacatagcacgacaggctgcccgtggccagcaggaga
cagaggagggcaggctccagcggtcacttctctaggggtgcatagttcag
cagcttctcaatcacgtccacgtgtgctagcagcatgcggcggcagcagt
agcgctttaggcccagagcgtccagggcatccctgtaaagagaagagtga
ggctggatgtggtctctagagtctggataggtttggaaccacctccagcc
ttgcctctgggtattcgtgtggataggggttaccagagcacatctacata
atcagcgattgaaacctgacactcaggcccattagggaaatggcctggag
aattttctgaaatatattgtattcctagaatgcttcacggaggaggccag
gtgacccttttcccacctagaggttacacttgctcatgtgccagtctctc
ccataggcatctgtatccaatctaacaggcttctgcctaacacctg
gaattctagggacagccaaagctgcatagtgaaaccttgtatcaggaggg
ggagatagctggagagaaccagctggaatccttaaggcactaaggtggga
actacagctgtgctgagaagaaggagaagggcctgcggaccaggatgctg
aaccaggaggccatctcctcttgtttccaggctgatgttaacagacagct
cagagaaaaggagcaagcacttgccatcccagaagtaaggacacagagca
gcctcataaacccactgtgcccagagcagctcccagctgtcgaaggatct
ttctgatcctctactgtgtcccaggtaccaatgtcaccaccctccgaagc
ctcacatcctaactgctgacggaactactccaccaactacagccactgga
ctcccatctcaggagccacactacccagcaccttacaaccacgatgctcg
gacaccactcacagagacaccttgtgctctgtggggttccatcactcact
taaagggtgcatagtaagctttgcccatgaactgtccctacagcccaaca
tgctctaaatgggagaactacctgtcccctgctaaagaacctttactccg
cactgggccttgtggccactctgcatgtactcttgggtagttcaggaaat
actcctattcctccagtgtttttcaaggattaccctgtctgtacttcctc
cattagagcagccctgtgggaatgccagagggcagcaatgtaacagagac
atctgagccacgatccctgatggagcacagcaggcaacactcaggtgtct
gtcacaggacttcatggtgactattagggaagatggccagggaggccttg
ctagcagctcacacttgcatcctgcccaacttccttcctctctggtctga
actctagcccttcttctatcccaacacccactgtaatctcctacctccaa
actcctcagtgtctctatggttctgcttaacagtctacaatagtcagtct
ttgaacttcccacaagcctctcagctctgtatgggatctctcatcaaata
tccctgggcccacgtctatattgttgaaccctgttcacagggcagtctct
tccagcctgattccttactgcctgtgactcacagtactcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_148658472_148659604
seq2: B6Ng01-289K02.b_45_1190

seq1  GAATTCCAGGATAGTCAAGGCCAAACAGAGAAACCCTGTCTTGGAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATAGTCAAGGCCAAACAGAGAAACCCTGTCTTGGAAAATG  50

seq1  AAAGGTAAATAAATCTGGGTTTGATTCCCAATACCTGATGGCAGCTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAAATAAATCTGGGTTTGATTCCCAATACCTGATGGCAGCTTATA  100

seq1  CATTCTATAACTTTACTCTCAGGGGATCTGGCCTCTGTGGGGACACAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATAACTTTACTCTCAGGGGATCTGGCCTCTGTGGGGACACAGTG  150

seq1  ATACAAAGACTTATAAGCAGACCAAATACCCAAATGCATAATAACCCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGACTTATAAGCAGACCAAATACCCAAATGCATAATAACCCTAG  200

seq1  CACAAGGATTGGGACCTCCAAGCACGCTCAGCATTCCAAAGGAATATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGATTGGGACCTCCAAGCACGCTCAGCATTCCAAAGGAATATTGT  250

seq1  CACCAGGCTTGGGCCCATCCATACCTGTGGATGGTGTGGTGCCCACATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCTTGGGCCCATCCATACCTGTGGATGGTGTGGTGCCCACATCC  300

seq1  ATTATGCCCATCCTGAACACAGGCAGGAAGCGGAGAGGCCCTAAAGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCCCATCCTGAACACAGGCAGGAAGCGGAGAGGCCCTAAAGCAAT  350

seq1  GTGGTACAAGACTACTGTAGGGCTACCTCGTTGATCAAAGTGGTCAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTACAAGACTACTGTAGGGCTACCTCGTTGATCAAAGTGGTCAAGGC  400

seq1  CCCGGGGAACGGAAGCAGGGTACTCCTCCACAGGACGAGACTCCCAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGGAACGGAAGCAGGGTACTCCTCCACAGGACGAGACTCCCAGTCA  450

seq1  GATGAAGGGGAAGGAGACCAGCCCTAGGGGAAAGACTGGAGGCAGGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGGGAAGGAGACCAGCCCTAGGGGAAAGACTGGAGGCAGGCCAG  500

seq1  GTAGCCTCAGAGACAGCACAGACATGGACATGGAGCACCTTGGAAGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTCAGAGACAGCACAGACATGGACATGGAGCACCTTGGAAGTTAG  550

seq1  ACCTGTTGGTGGTTCTGCAAACATCTTTACTAAACAGTTCCTTCCAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTGGTGGTTCTGCAAACATCTTTACTAAACAGTTCCTTCCAGGGT  600

seq1  AACAGGACTTAGCCACAGGGCCACAGCCAGGCAATACACCAACATCCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGACTTAGCCACAGGGCCACAGCCAGGCAATACACCAACATCCCCA  650

seq1  ATAGCTCAGTTTGAACATAGCACGACAGGCTGCCCGTGGCCAGCAGGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCAGTTTGAACATAGCACGACAGGCTGCCCGTGGCCAGCAGGAGA  700

seq1  CAGAGGAGGGCAGGCTCCAGCGGTCACTTCTCTAGGGGTGCATAGTTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAGGGCAGGCTCCAGCGGTCACTTCTCTAGGGGTGCATAGTTCAG  750

seq1  CAGCTTCTCAATCAGGTCCACGTGTGCTAGCAGCATGCGGCGGCAGCAGT  800
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTCAATCACGTCCACGTGTGCTAGCAGCATGCGGCGGCAGCAGT  800

seq1  AGCGCTTTAGGCCCAGAGCGTCCAGGGCATCCCTGTAAAGAGAAGAGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTTTAGGCCCAGAGCGTCCAGGGCATCCCTGTAAAGAGAAGAGTGA  850

seq1  GGCTGGATGTGGTCTCTAGAGTCTGGATAGGTTTGGAACCACCTCCAG-C  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGCTGGATGTGGTCTCTAGAGTCTGGATAGGTTTGGAACCACCTCCAGCC  900

seq1  TTGCCTCTGGGTATTCGTGTGGATAGGGGTTACCAGAGCACATCTACATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTGGGTATTCGTGTGGATAGGGGTTACCAGAGCACATCTACATA  950

seq1  ATCAGCGATTGAAACCTGACAC-CAGGCC--ATAGGGAAATGGCCTGGAG  996
      |||||||||||||||||||||| ||||||   ||||||||||||||||||
seq2  ATCAGCGATTGAAACCTGACACTCAGGCCCATTAGGGAAATGGCCTGGAG  1000

seq1  A--TTTCTGAAATA---TGTAT--CTAG-ATGC-TCAGGGAGGA-GCCAG  1036
      |  |||||||||||   |||||  |||| |||| ||| |||||| |||||
seq2  AATTTTCTGAAATATATTGTATTCCTAGAATGCTTCACGGAGGAGGCCAG  1050

seq1  GTGACCCTTTCCCCACCTAGAAGTTACACCTGCTCATGTGCCAGTCTTCT  1086
      |||||||||| |||||||||| ||||||| |||||||||||||||| |||
seq2  GTGACCCTTTTCCCACCTAGAGGTTACACTTGCTCATGTGCCAGTC-TCT  1099

seq1  CCCATA-GCATCCTGTATCCATCCTTAACAGCCTTCTGCCT-ACACCTG  1133
      |||||| |||| |||||||||  | |||||| ||||||||| |||||||
seq2  CCCATAGGCAT-CTGTATCCAATC-TAACAGGCTTCTGCCTAACACCTG  1146

seq1: chr7_148785791_148786934
seq2: B6Ng01-289K02.g_75_1215 (reverse)

seq1  TTGAGCACTGTGAAGCACAGGCAGGTAGAGGAACCAGGCTGGAGAGA-AC  49
      ||||| |||||||  |||||||| ||| ||||| ||||||||| ||| ||
seq2  TTGAGTACTGTGAGTCACAGGCA-GTA-AGGAATCAGGCTGGA-AGAGAC  47

seq1  TGCCCTGTGGAAACA-GGTTCACAAATATAGACGTGGGCCCCAGGATA-T  97
      |||||||||  |||| ||||||  |||||||||||||||||  ||||| |
seq2  TGCCCTGTG--AACAGGGTTCAACAATATAGACGTGGGCCCAGGGATATT  95

seq1  TGATGAAGAGAACCCATTACAGAGCTGAGAGGC-TGTGGGAAGTTCAAAG  146
      ||||| ||||| |||| |||||||||||||||| ||||||||||||||||
seq2  TGATG-AGAGATCCCA-TACAGAGCTGAGAGGCTTGTGGGAAGTTCAAAG  143

seq1  ACTGACTATTGTAGACTG-TAAGCAGAAACCATAGAGAACACTGAGGAGT  195
      |||||||||||||||||| ||||||| |||||||||| ||||||||||||
seq2  ACTGACTATTGTAGACTGTTAAGCAG-AACCATAGAG-ACACTGAGGAGT  191

seq1  TT-GAGGTAGGAGATTACAGTGGGTGTTGGGATAGAAGAAGGGCTAGAGT  244
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGTAGGAGATTACAGTGGGTGTTGGGATAGAAGAAGGGCTAGAGT  241

seq1  TCAGACCAGAGAGGAAGGAAGTTGGGCAGGATGCAAGTGTGAGCTGCTAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCAGAGAGGAAGGAAGTTGGGCAGGATGCAAGTGTGAGCTGCTAG  291

seq1  CAAGGCCTCCCTGGCCATCTTCCCTAATAGTCACCATGAAGTCCTGTGAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTCCCTGGCCATCTTCCCTAATAGTCACCATGAAGTCCTGTGAC  341

seq1  AGACACCTGAGTGTTGCCTGCTGTGCTCCATCAGGGATCGTGGCTCAGAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCTGAGTGTTGCCTGCTGTGCTCCATCAGGGATCGTGGCTCAGAT  391

seq1  GTCTCTGTTACATTGCTGCCCTCTGGCATTCCCACAGGGCTGCTCTAATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTTACATTGCTGCCCTCTGGCATTCCCACAGGGCTGCTCTAATG  441

seq1  GAGGAAGTACAGACAGGGTAATCCTTGAAAAACACTGGAGGAATAGGAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGTACAGACAGGGTAATCCTTGAAAAACACTGGAGGAATAGGAGT  491

seq1  ATTTCCTGAACTACCCAAGAGTACATGCAGAGTGGCCACAAGGCCCAGTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGAACTACCCAAGAGTACATGCAGAGTGGCCACAAGGCCCAGTG  541

seq1  CGGAGTAAAGGTTCTTTAGCAGGGGACAGGTAGTTCTCCCATTTAGAGCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGTAAAGGTTCTTTAGCAGGGGACAGGTAGTTCTCCCATTTAGAGCA  591

seq1  TGTTGGGCTGTAGGGACAGTTCATGGGCAAAGCTTACTATGCACCCTTTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGCTGTAGGGACAGTTCATGGGCAAAGCTTACTATGCACCCTTTA  641

seq1  AGTGAGTGATGGAACCCCACAGAGCACAAGGTGTCTCTGTGAGTGGTGTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGATGGAACCCCACAGAGCACAAGGTGTCTCTGTGAGTGGTGTC  691

seq1  CGAGCATCGTGGTTGTAAGGTGCTGGGTAGTGTGGCTCCTGAGATGGGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCATCGTGGTTGTAAGGTGCTGGGTAGTGTGGCTCCTGAGATGGGAG  741

seq1  TCCAGTGGCTGTAGTTGGTGGAGTAGTTCCGTCAGCAGTTAGGATGTGAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGGCTGTAGTTGGTGGAGTAGTTCCGTCAGCAGTTAGGATGTGAG  791

seq1  GCTTCGGAGGGTGGTGACATTGGTACCTGGGACACAGTAGAGGATCAGAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGGAGGGTGGTGACATTGGTACCTGGGACACAGTAGAGGATCAGAA  841

seq1  AGATCCTTCGACAGCTGGGAGCTGCTCTGGGCACAGTGGGTTTATGAGGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTTCGACAGCTGGGAGCTGCTCTGGGCACAGTGGGTTTATGAGGC  891

seq1  TGCTCTGTGTCCTTACTTCTGGGATGGCAAGTGCTTGCTCCTTTTCTCTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGTGTCCTTACTTCTGGGATGGCAAGTGCTTGCTCCTTTTCTCTG  941

seq1  AGCTGTCTGTTAACATCAGCCTGGAAACAAGAGGAGATGGCCTCCTGGTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTGTTAACATCAGCCTGGAAACAAGAGGAGATGGCCTCCTGGTT  991

seq1  CAGCATCCTGGTCCGCAGGCCCTTCTCCTTCTTCTCAGCACAGCTGTAGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCCTGGTCCGCAGGCCCTTCTCCTTCTTCTCAGCACAGCTGTAGT  1041

seq1  TCCCACCTTAGTGCCTTAAGGATTCCAGCTGGTTCTCTCCAGCTATCTCC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCTTAGTGCCTTAAGGATTCCAGCTGGTTCTCTCCAGCTATCTCC  1091

seq1  CCCTCCTGATACAAGGTTTCACTATGCAGCTTTGGCTGTCCCTAGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTGATACAAGGTTTCACTATGCAGCTTTGGCTGTCCCTAGAATTC  1141