BAC Information

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BAC

Clone NameB6Ng01-291O17
Chromosome7 (Build37)
Map Location 137,761,457 - 137,910,317
singlet/doubletdoublet
Overlap geneTacc2
Upstream geneBrwd2, LOC100043150, Fgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a
Downstream geneLOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291O17.bB6Ng01-291O17.g
ACCGA088686GA088687
length1,199982
definitionB6Ng01-291O17.b B6Ng01-291O17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,761,457 - 137,762,666)(137,909,686 - 137,910,317)
sequence
gaattcattcttggttgctctctgataagaatgagtaggtttacagaggt
gcatctctcaggctgtctctgatggtgatgacttcaatcatcctgaaggg
aagccatggactcccttcacagccagtccctgtagaagacagctgtggaa
atggctttgtttgtttcatttccagtgtgataaagggggctcgaagggag
acatacacaggaacactctgagtttcatcctctgctaaattctttggctc
ggttcaggggtgggacactctgacatgtaaagtccttgttaaaagaaaaa
gacccctccaggcagggatcacagcattgatgggaaaggcccatcgggct
gcatatcccatgtctggctccctcctgggtacctgccaaaaggccaagtg
cacacgctttactcaaattcggggcagttttgcacatgtctgctagtgcg
gggccagctgtcttcatgttctgggtgaccacatgtacactggagtatat
ctctcactctcagtattctctaccctgatggctttgccttgaggtcagga
aatgctaacttgcttgaaattgtagcctgttctgtcttgggtcctcaggc
acccatcactcctcttacgtgcaaggcaaatgtggctgccgtgacaatgg
gatggccatacctctttgaaggacatagatgatggatgttccatgcaggg
gcgactagtttggcgagagaggctgcaatgggtggagtacagagctttct
ctcttccttgggaggttttgttctttcagcatcgcacagagagagtagga
agctgtccaatcaaggtccaggctcagcctccctgttctgtgttctcatc
tgcaaagagcaggggcaacacccttggtatatgctgcttactgggtttaa
tgagacggtccatgccaagcgctgacaccattccacccattcgtttctca
gcatgttattttgggacggctgaaacctcagaacattgaaaagaaaggac
atagatgcccattcagtagatgcccacatgcttgctttattagtttcctc
agctgccatgaatagactgcctccagcttgccagcttccaaacgaaggta
ttttttctccatgttcgctgctgcagttcaagtccagggtgtaagcctgt
ttcgggtgagggccttctctttgcttgcaacatctttcactatgacctc
gaattctctcccgaagctcactggaagctgctcagtcgcttccctttcag
tggcccccaaccttcgtgctgtactgactccaggaggagcaacagccacc
acagaagggaccctggcagctcctcgccttgatctggctccaccctcccc
ctcagagagcacatagatctccgcagatagtatccagtagacagacacag
acaagcacaggtctactaaaaagaaaagtacaaagaaagccaggcgcagg
catgaagacaacacacacctcccagcactgggaaggttaagacagacagg
tcaggagttcaaggtcacagccaagtgggagtctagcaagagctttatgg
aacagtgcttcaataaggcaaaacaagatgtggcaaagcaaataaaggcc
ttctggaaaacaaaaggcaggtcaagaatcattccgaaccaaagatcacc
atggtctgttagttggtgagctccaagggccctgtgagagatgtggacca
atcctgcgtaggcgacaagcacagagaagcccgatgcagctgagacttgc
ccaacagagtgtctccctttgtgatttctttattgtttctactttcattt
ttagatcctggatggttttgttcaattctttcacctgtctggatgtattt
tcctgtaattttttgtttgtttgtttttcgagacagggtttctccttgta
gccctggctgtcctggaactcactttgtagaccaggctggcctcaaactc
agaaatccacctgcctctgcctcctgagtgctgggattaaaggcgtgcgc
caccacgcccggcttttctgtaattcttttaagggatttttgtgtttcct
ctttaagggcttctagctgtttacctgtgttctcctgtatttctttaagg
gaattattttctttcccttatagtcctccatcatcatcgtgagaagttaa
ctttagatccatgtcttgcttttctggtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_137761457_137762666
seq2: B6Ng01-291O17.b_51_1249

seq1  GAATTCATTCTTGGTTGCTCTCTGATAAGAATGAGTAGGTTTACAGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTGGTTGCTCTCTGATAAGAATGAGTAGGTTTACAGAGGT  50

seq1  GCATCTCTCAGGCTGTCTCTGATGGTGATGACTTCAATCATCCTGAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTCAGGCTGTCTCTGATGGTGATGACTTCAATCATCCTGAAGGG  100

seq1  AAGCCATGGACTCCCTTCACAGCCAGTCCCTGTAGAAGACAGCTGTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATGGACTCCCTTCACAGCCAGTCCCTGTAGAAGACAGCTGTGGAA  150

seq1  ATGGCTTTGTTTGTTTCATTTCCAGTGTGATAAAGGGGGCTCGAAGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTTGTTTGTTTCATTTCCAGTGTGATAAAGGGGGCTCGAAGGGAG  200

seq1  ACATACACAGGAACACTCTGAGTTTCATCCTCTGCTAAATTCTTTGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACAGGAACACTCTGAGTTTCATCCTCTGCTAAATTCTTTGGCTC  250

seq1  GGTTCAGGGGTGGGACACTCTGACATGTAAAGTCCTTGTTAAAAGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGGGGTGGGACACTCTGACATGTAAAGTCCTTGTTAAAAGAAAAA  300

seq1  GACCCCTCCAGGCAGGGATCACAGCATTGATGGGAAAGGCCCATCGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTCCAGGCAGGGATCACAGCATTGATGGGAAAGGCCCATCGGGCT  350

seq1  GCATATCCCATGTCTGGCTCCCTCCTGGGTACCTGCCAAAAGGCCAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCCCATGTCTGGCTCCCTCCTGGGTACCTGCCAAAAGGCCAAGTG  400

seq1  CACACGCTTTACTCAAATTCGGGGCAGTTTTGCACATGTCTGCTAGTGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCTTTACTCAAATTCGGGGCAGTTTTGCACATGTCTGCTAGTGCG  450

seq1  GGGCCAGCTGTCTTCATGTTCTGGGTGACCACATGTACACTGGAGTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGCTGTCTTCATGTTCTGGGTGACCACATGTACACTGGAGTATAT  500

seq1  CTCTCACTCTCAGTATTCTCTACCCTGATGGCTTTGCCTTGAGGTCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTCTCAGTATTCTCTACCCTGATGGCTTTGCCTTGAGGTCAGGA  550

seq1  AATGCTAACTTGCTTGAAATTGTAGCCTGTTCTGTCTTGGGTCCTCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAACTTGCTTGAAATTGTAGCCTGTTCTGTCTTGGGTCCTCAGGC  600

seq1  ACCCATCACTCCTCTTACGTGCAAGGCAAATGTGGCTGCCGTGACAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCACTCCTCTTACGTGCAAGGCAAATGTGGCTGCCGTGACAATGG  650

seq1  GATGGCCATACCTCTTTGAAGGACATAGATGATGGATGTTCCATGCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCATACCTCTTTGAAGGACATAGATGATGGATGTTCCATGCAGGG  700

seq1  GCGACTAGTTTGGCGAGAGAGGCTGCAATGGGTGGAGTACAGAGCTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACTAGTTTGGCGAGAGAGGCTGCAATGGGTGGAGTACAGAGCTTTCT  750

seq1  CTCTTCCTTGGGAGGTTTTGTTCTTTCAGCATCGCACAGAGAGAGTAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTTGGGAGGTTTTGTTCTTTCAGCATCGCACAGAGAGAGTAGGA  800

seq1  AGCTGTCCAATCAAGGTCCAGGCTCAGCCTCCCTGTTCTGTGTTCTCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCCAATCAAGGTCCAGGCTCAGCCTCCCTGTTCTGTGTTCTCATC  850

seq1  TGCAAAGAGCAGGGGCAACACCCTTGGTATATGCTGCTTACTGGGTTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGAGCAGGGGCAACACCCTTGGTATATGCTGCTTACTGGGTTTAA  900

seq1  TGAGACGGTCCATGCCAAGCGCTGACACCATTCCACCCATTCGTTTCTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACGGTCCATGCCAAGCGCTGACACCATTCCACCCATTCGTTTCTCA  950

seq1  GCATGTTATTTTGGAAGGGCTGAAACCTCAGGAACATTGAAAAGAAAGGA  1000
      |||||||||||||| | ||||||||||||| |||||||||||||||||||
seq2  GCATGTTATTTTGGGACGGCTGAAACCTCA-GAACATTGAAAAGAAAGGA  999

seq1  CAATAGATGCCCATTCAGTAGATGCCCACATGCTTGCTTTATTAGTTTCC  1050
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-ATAGATGCCCATTCAGTAGATGCCCACATGCTTGCTTTATTAGTTTCC  1048

seq1  TCAGGCTGCCATG-ATAGACTGCCT-CAGCCTGCCAGCTTCACAACAGAG  1098
      ||| ||||||||| ||||||||||| |||| ||||||||||  |||  ||
seq2  TCA-GCTGCCATGAATAGACTGCCTCCAGCTTGCCAGCTTCCAAACGAAG  1097

seq1  GTATTTTCTCACAGTGTCGGCTGCTGGCAGTTCAGGTCGAGGTGTTGTAG  1148
      ||||||| || |  |||  |||||| |||||||| ||| ||  | |||| 
seq2  GTATTTTTTCTCCATGTTCGCTGCT-GCAGTTCAAGTCCAG--GGTGTAA  1144

seq1  GGCTGGTTTCTGGTGAGGCCTCTCCTTCTGGCTTGCAGAAAACATCTTCT  1198
      | || ||||| ||||||| | || ||  | ||||||    |||||||| |
seq2  GCCT-GTTTCGGGTGAGGGC-CTTCTCTTTGCTTGC----AACATCTT-T  1187

seq1  CACTATGACCTC  1210
      ||||||||||||
seq2  CACTATGACCTC  1199

seq1: chr7_137909686_137910317
seq2: B6Ng01-291O17.g_67_698 (reverse)

seq1  GAAAGAATTGAACAAAACCATCCAGGATCTAAAAATGAAAGTAGAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATTGAACAAAACCATCCAGGATCTAAAAATGAAAGTAGAAACAA  50

seq1  TAAAGAAATCACAAAGGGAGACACTCTGTTGGGCAAGTCTCAGCTGCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATCACAAAGGGAGACACTCTGTTGGGCAAGTCTCAGCTGCATC  100

seq1  GGGCTTCTCTGTGCTTGTCGCCTACGCAGGATTGGTCCACATCTCTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCTCTGTGCTTGTCGCCTACGCAGGATTGGTCCACATCTCTCACA  150

seq1  GGGCCCTTGGAGCTCACCAACTAACAGACCATGGTGATCTTTGGTTCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTTGGAGCTCACCAACTAACAGACCATGGTGATCTTTGGTTCGGA  200

seq1  ATGATTCTTGACCTGCCTTTTGTTTTCCAGAAGGCCTTTATTTGCTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTTGACCTGCCTTTTGTTTTCCAGAAGGCCTTTATTTGCTTTGC  250

seq1  CACATCTTGTTTTGCCTTATTGAAGCACTGTTCCATAAAGCTCTTGCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTTGTTTTGCCTTATTGAAGCACTGTTCCATAAAGCTCTTGCTAG  300

seq1  ACTCCCACTTGGCTGTGACCTTGAACTCCTGACCTGTCTGTCTTAACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCACTTGGCTGTGACCTTGAACTCCTGACCTGTCTGTCTTAACCTT  350

seq1  CCCAGTGCTGGGAGGTGTGTGTTGTCTTCATGCCTGCGCCTGGCTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGCTGGGAGGTGTGTGTTGTCTTCATGCCTGCGCCTGGCTTTCTT  400

seq1  TGTACTTTTCTTTTTAGTAGACCTGTGCTTGTCTGTGTCTGTCTACTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTTTCTTTTTAGTAGACCTGTGCTTGTCTGTGTCTGTCTACTGGA  450

seq1  TACTATCTGCGGAGATCTATGTGCTCTCTGAGGGGGAGGGTGGAGCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCTGCGGAGATCTATGTGCTCTCTGAGGGGGAGGGTGGAGCCAGA  500

seq1  TCAAGGCGAGGAGCTGCCAGGGTCCCTTCTGTGGTGGCTGTTGCTCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCGAGGAGCTGCCAGGGTCCCTTCTGTGGTGGCTGTTGCTCCTCC  550

seq1  TGGAGTCAGTACAGCACGAAGGTTGGGGGCCACTGAAAGGGAAGCGACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCAGTACAGCACGAAGGTTGGGGGCCACTGAAAGGGAAGCGACTG  600

seq1  AGCAGCTTCCAGTGAGCTTCGGGAGAGAATTC  632
      ||||||||||||||||||||||||||||||||
seq2  AGCAGCTTCCAGTGAGCTTCGGGAGAGAATTC  632