BAC Information

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BAC

Clone NameB6Ng01-292M19
Chromosome7 (Build37)
Map Location 144,367,570 - 144,503,163
singlet/doubletdoublet
Overlap geneEbf3
Upstream geneLOC546009, EG621677, EG668771, Mgmt, EG621804
Downstream gene9430038I01Rik, Txnl2, LOC435235, Tcerg1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292M19.bB6Ng01-292M19.g
ACCGA089344GA089345
length7141,123
definitionB6Ng01-292M19.b B6Ng01-292M19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,502,451 - 144,503,163)(144,367,570 - 144,368,698)
sequence
gaattcctaaattaagcacaccctgcactgattgttttagaatggaggat
atacagggtcacactagaaatgaaagtagtctcttcatttttggttcata
actttcggtattatgaaccaagtgggaaagagcttcctgcagcccggcac
acacgcctcctattctctgagcacaatttgcacatttttatttctctgaa
aaagtttgtccttacctaggcagccagaacatgaggttttaatgtctgca
gccgcagagctgtgtggtttttctcctggagcaaagatctggcaggtaaa
cgtgtttttctgacacagactgtggtgtgcccttttgccagccttgcacc
gattcacagaagctctggaactcggctgctgtttttgtcaggcggctttt
atttcctttgtatgtcgggcaaaaaggttttgagaatcgccgtagtctaa
ttaggaggttttttttttttttttttgcaggcgctgctaagtttctgttc
ctcatgtacgggagaagcaagaggcttcttttaaagtacacttttattgt
tcatttagcctagtacctttgcagtctacacggtgcagaaaataaaggca
tttaatctcctcactgacggggatggagggggggggactaaagaaatagc
ccagtaactgatcaaagaaacaatggcgctgaaccgacagtttatggatt
tttgtttgtgctat

gaattccagaagattaagacagggagatctccaagttcaaggtcatctgg
gattaaagacatggtggcacacacctttaatctgggctacaccttctgct
ggaggcctacataaggacattggaagaaggaagattcactctctcttctt
caccaacttgccttgtgggattgagcaactgctagatccttgagtcattc
atagctgctgctgaccattgttgggagttggactacagactgtaagtcat
caacaaattcccttactatatagagactacccataagttctgtgactcta
gagaaccctgactaatacactacctgagaaatgtttgcagtagaaagaaa
acccattgaaaccactttcaaagattccattaatgtctttgcttttctgt
ctcatccttagatttcctgaatgagccagacctctgtagaagatagtcta
aggctgtaatgacctcagaaaggcatcccaggcccttccacacttcactg
accacagtactttacagtgtatgtggcctcccttctgttctttgaatggt
cctctgcagccagcctattgtcctatctcaagactgctatttcataactc
tctgctgggatggcctctgactggggcctcaggacaccagtacccaacct
ttaaagtctatggtgcacctgacccagtgtctcagaaaggatgaactgga
agttggtcacctggagggtcctggagttcagatctccatccaccacatag
ccatcacaccctgaggttcatggcagttttagggggtgaaggaatgaatg
actgtgtaaagttctaacagtgtaagtaggaatgcctgatatcagatccc
cagcacccctgcacacaccacacacacacacaccacacacacacacacac
aaacaaaacaaaagcagtgtagcagtttgtgtgtatagtagccccagcac
aggggctaggttcagagacagaagtggggagacactgtcttcaataaaat
aggtggagaacattaagcagacattcccactgtcaactgtggtctctgta
catactagagccaggcaagccggactacttgcacactcatgctgattctc
tttccttatcgaactatacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144502451_144503163
seq2: B6Ng01-292M19.b_49_761 (reverse)

seq1  TAGCACAAACAGAAATCCATAAACTGTCGGTTCAGCGCCATTGACTCTTT  50
      ||||||||||| |||||||||||||||||||||||||||||||  |||||
seq2  TAGCACAAACAAAAATCCATAAACTGTCGGTTCAGCGCCATTGTTTCTTT  50

seq1  GATCAGTTACTGGGCTATTTCTTTAGTCCCCCCCCCTCCATCCCCGTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTTACTGGGCTATTTCTTTAGTCCCCCCCCCTCCATCCCCGTCAG  100

seq1  TGAGGAGATTAAATGCCTTTATTTTCTGCACCGTGTAGACTGCAAAGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGATTAAATGCCTTTATTTTCTGCACCGTGTAGACTGCAAAGGTA  150

seq1  CTAGGCTAAATGAACAATAAAAGTGTACTTTAAAAGAAGCCTCTTGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTAAATGAACAATAAAAGTGTACTTTAAAAGAAGCCTCTTGCTTC  200

seq1  TCCCGTACATGAGGAACAGAAACTTAGCAGCGCCTGCAAAAAAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTACATGAGGAACAGAAACTTAGCAGCGCCTGCAAAAAAAAAAAAA  250

seq1  AAAAACCTCCTAATTAGACTACGGCGATTCTCAAAACCTTTTTGCCCGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCTCCTAATTAGACTACGGCGATTCTCAAAACCTTTTTGCCCGAC  300

seq1  ATACAAAGGAAATAAAAGCCGCCTGACAAAAACAGCAGCCGAGTTCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGGAAATAAAAGCCGCCTGACAAAAACAGCAGCCGAGTTCCAGA  350

seq1  GCTTCTGTGAATCGGTGCAAGGCTGGCAAAAGGGCACACCACAGTCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTGAATCGGTGCAAGGCTGGCAAAAGGGCACACCACAGTCTGTG  400

seq1  TCAGAAAAACACGTTTACCTGCCAGATCTTTGCTCCAGGAGAAAAACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAACACGTTTACCTGCCAGATCTTTGCTCCAGGAGAAAAACCAC  450

seq1  ACAGCTCTGCGGCTGCAGACATTAAAACCTCATGTTCTGGCTGCCTAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCTGCGGCTGCAGACATTAAAACCTCATGTTCTGGCTGCCTAGGT  500

seq1  AAGGACAAACTTTTTCAGAGAAATAAAAATGTGCAAATTGTGCTCAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAAACTTTTTCAGAGAAATAAAAATGTGCAAATTGTGCTCAGAGA  550

seq1  ATAGGAGGCGTGTGTGCCGGGCTGCAGGAAGCTCTTTCCCACTTGGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGGCGTGTGTGCCGGGCTGCAGGAAGCTCTTTCCCACTTGGTTCA  600

seq1  TAATACCGAAAGTTATGAACCAAAAATGAAGAGACTACTTTCATTTCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACCGAAAGTTATGAACCAAAAATGAAGAGACTACTTTCATTTCTAG  650

seq1  TGTGACCCTGTATATCCTCCATTCTAAAACAATCAGTGCAGGGTGTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCCTGTATATCCTCCATTCTAAAACAATCAGTGCAGGGTGTGCTT  700

seq1  AATTTAGGAATTC  713
      |||||||||||||
seq2  AATTTAGGAATTC  713


seq1: chr7_144367570_144368698
seq2: B6Ng01-292M19.g_64_1186

seq1  GAATTCCAGAAGATTAAGACAGGGAGATCTCCAAGTTCAAGGTCATCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAGATTAAGACAGGGAGATCTCCAAGTTCAAGGTCATCTGG  50

seq1  GATTAAAGACATGGTGGCACACACCTTTAATCTGGGCTACACCTTCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGACATGGTGGCACACACCTTTAATCTGGGCTACACCTTCTGCT  100

seq1  GGAGGCCTACATAAGGACATTGGAAGAAGGAAGATTCACTCTCTCTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCTACATAAGGACATTGGAAGAAGGAAGATTCACTCTCTCTTCTT  150

seq1  CACCAACTTGCCTTGTGGGATTGAGCAACTGCTAGATCCTTGAGTCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACTTGCCTTGTGGGATTGAGCAACTGCTAGATCCTTGAGTCATTC  200

seq1  ATAGCTGCTGCTGACCATTGTTGGGAGTTGGACTACAGACTGTAAGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGCTGCTGACCATTGTTGGGAGTTGGACTACAGACTGTAAGTCAT  250

seq1  CAACAAATTCCCTTACTATATAGAGACTACCCATAAGTTCTGTGACTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATTCCCTTACTATATAGAGACTACCCATAAGTTCTGTGACTCTA  300

seq1  GAGAACCCTGACTAATACACTACCTGAGAAATGTTTGCAGTAGAAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCCTGACTAATACACTACCTGAGAAATGTTTGCAGTAGAAAGAAA  350

seq1  ACCCATTGAAACCACTTTCAAAGATTCCATTAATGTCTTTGCTTTTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTGAAACCACTTTCAAAGATTCCATTAATGTCTTTGCTTTTCTGT  400

seq1  CTCATCCTTAGATTTCCTGAATGAGCCAGACCTCTGTAGAAGATAGTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCTTAGATTTCCTGAATGAGCCAGACCTCTGTAGAAGATAGTCTA  450

seq1  AGGCTGTAATGACCTCAGAAAGGCATCCCAGGCCCTTCCACACTTCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTAATGACCTCAGAAAGGCATCCCAGGCCCTTCCACACTTCACTG  500

seq1  ACCACAGTACTTTACAGTGTATGTGGCCTCCCTTCTGTTCTTTGAATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGTACTTTACAGTGTATGTGGCCTCCCTTCTGTTCTTTGAATGGT  550

seq1  CCTCTGCAGCCAGCCTATTGTCCTATCTCAAGACTGCTATTTCATAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCAGCCAGCCTATTGTCCTATCTCAAGACTGCTATTTCATAACTC  600

seq1  TCTGCTGGGATGGCCTCTGACTGGGGCCTCAGGACACCAGTACCCAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGGATGGCCTCTGACTGGGGCCTCAGGACACCAGTACCCAACCT  650

seq1  TTAAAGTCTATGGTGCACCTGACCCAGTGTCTCAGAAAGGATGAACTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTCTATGGTGCACCTGACCCAGTGTCTCAGAAAGGATGAACTGGA  700

seq1  AGTTGGTCACCTGGAGGGTCCTGGAGTTCAGATCTCCATCCACCACATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTCACCTGGAGGGTCCTGGAGTTCAGATCTCCATCCACCACATAG  750

seq1  CCATCACACCCTGAGGTTCATGGCAGTTTTAGGGGGTGAAGGAATGAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACACCCTGAGGTTCATGGCAGTTTTAGGGGGTGAAGGAATGAATG  800

seq1  ACTGTGTAAAGTTCTAACAGTGTAAGTAGGAATGCCTGATATCAGATCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTAAAGTTCTAACAGTGTAAGTAGGAATGCCTGATATCAGATCCC  850

seq1  CAGCACCCCTGCACACACACACACACACACACACACACACACACACACAC  900
      |||||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  CAGCACCCCTGCACACAC-CACACACACACACAC-CACACACACACACAC  898

seq1  ACAAAACAAAAACAAAAAGCAGGTGTAGCAGTTTGTGTGTATAGTAGCCC  950
      || ||||||||   ||||||| ||||||||||||||||||||||||||||
seq2  AC-AAACAAAA--CAAAAGCA-GTGTAGCAGTTTGTGTGTATAGTAGCCC  944

seq1  CAGCACCAGGGGCTAGGTTCAGAGACAGAAGT-GGGAGACACTGTCT--C  997
      ||||| |||||||||||||||||||||||||| ||||||||||||||   
seq2  CAGCA-CAGGGGCTAGGTTCAGAGACAGAAGTGGGGAGACACTGTCTTCA  993

seq1  ATAAAATAAGGTGAGGAACAATTAAGCAAGACA-TCCCACTGTCAACCTG  1046
      ||||||| |||||  |||| ||||||| ||||| |||||||||||| |||
seq2  ATAAAAT-AGGTGGAGAAC-ATTAAGC-AGACATTCCCACTGTCAA-CTG  1039

seq1  TGGTCTCTGTACATACCAGAG-CAGGCAAGCCGACCCACCTGCACACCCA  1095
      |||||||||||||||| |||| |||||||||||  | || ||||||| ||
seq2  TGGTCTCTGTACATACTAGAGCCAGGCAAGCCGGACTACTTGCACACTCA  1089

seq1  TGCAGATTCTCTTTCTCTACCCAAACATACACAC  1129
      ||| |||||||||||  || | ||  ||||||||
seq2  TGCTGATTCTCTTTCCTTATCGAACTATACACAC  1123


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