BAC Information

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BAC

Clone NameB6Ng01-295E11
Chromosome7 (Build37)
Map Location 59,646,000 - 59,778,294
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865, LOC100040718
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295E11.bB6Ng01-295E11.g
ACCGA091188GA091189
length1,1121,120
definitionB6Ng01-295E11.b B6Ng01-295E11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,777,167 - 59,778,294)(59,646,000 - 59,647,123)
sequence
gaattctaaaaatgtttacatgtatatttgggaaaggactcattgctact
agaaagagtaaactaagggaagggaggaggaaagactggagaaacataaa
gaagttaagacattttgattgacatgggttgatggattggttatatgtcc
cagtaagtcaatggtaagattggagttagggccacagcagtagaaaatac
acattgatttgaatgctatttagtaataagtcttcataagacaaaggtag
ttttgtttgtgtgcaataaagacaagaattgcaaaaaaaaaaaaaatgaa
cagggcattgggtaatcaattggtaaacaatcagattgtgttacatgtaa
ttaatgtcgttaatgtattgcatatgattaccatgtaatacaataaatct
tcttttacttagagtgtaagcaagaaaataaaaggacccatcattttggc
cattataaggcttagaactcattcttcatcatgctgagcaagtcagaaca
gcaggggatggaggaggaggcaacaatcagaggagagcagggaatgctta
cttgacttctaaagataacctcatgttctccatcttctgcatcttcctca
ttccttgttcagggaatagtcctacccaaattaggatgggtcgatctaca
tctattagcataatctaaataacttacactcccacaggcatgcctggtac
taagccaaattagataccccctcagagatatgtgtgctagccttatccaa
gttgagtatagatctcaatacactgaaatgaatccaaactaccattttgt
gcttcaaagagatgagatggttgtacatggcggagcttactttttaaata
atagaattaaatttatttattataatagtactacataatattatacaaat
gtatttatattaatagtctcagataatgaaaaatcctgtcctctctaatg
atcctcttaggtttaacagacacattctcactttaacattgctaataatg
cctatgagaatatttagagatgatacactatatctgaacctcagtttgtc
ctgagatttaaagagaaatacttgttcagattctttttttgatgggaatt
ttcttatttaca

gaattcctgagtgtgcaaaggagtgcatctctgggtctgtatctgtttct
tatggcttttgtgggcttttttcctgtttcatttgttttactctaatggg
tgtttttgtcttactttcttttaattatcttctagagtcctgctcatttt
ctaataacaaaaaggtgggtggatctctctgggaagggaggtggtgaaga
actgcttagatgaggggaaactgtagacaagatttatatttttaaaagtt
tattttcaataaaagaaaaaaatccatttttgatgaaaaatattttaatt
taaggaattaaaatataattacattatttccttcttccctttcctccctc
cagcccccttgatctggagcccattttgatctacacagactcattatagg
caaaaagaaaggaccatagcaaattatgaacattccacatgtttcctatt
tggacacaacacacattattttcatattttacagctttagatcaaaagca
tattttagcttatcttcaaaggaataaacaagctgacaaatatgtacaaa
cacaaatacttaaaatcatataaacataaaccatacagagcccttattca
gatatataaacccatccacatacattcaccacacacacacatacacacac
acacacacacacacacacacaggcgttcatatgttgatgcagacctaaaa
acacacatacatttacccccacaccatatatatgcacatgcacatgaatg
tgtttcagtactcatagacatatatgagctgatacaaattcaaacaatct
tacaggtgcacacacatgcacatgttttgcctctgatatagactaactca
ctgattggagacttttagtatgtagaaggccatggaaacaactttcaatt
atctttaggaatctgagaatttgatgtatttcccaaataagtaactctgt
gtaccattactcagtgtgcttctactgtggaatttctagggtcacttggt
gatttttaacagacgttgcatgtagattacactgattctatgagtccaga
gaagaacaccaattgcagattttcaagagaatattttagtgagggagaga
ttctttccagcctgaattac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59777167_59778294
seq2: B6Ng01-295E11.b_47_1158 (reverse)

seq1  TGTAAATAAAGAAAATATCCAATTAAAAAAAAAGAATTCTGAACAAGTAA  50
      ||||||| |||||||| ||| ||   |||||||||| ||||||||||| |
seq2  TGTAAAT-AAGAAAAT-TCCCAT--CAAAAAAAGAA-TCTGAACAAGT-A  44

seq1  TTTCTCTTTAAAATCTCCAAGGAACAAACTGAGTTTCAGATAATTAGTGT  100
      ||||||||| |||||||  ||| |||||||||| ||||||||  ||||||
seq2  TTTCTCTTT-AAATCTC--AGG-ACAAACTGAGGTTCAGATA--TAGTGT  88

seq1  AATTCATCTCTAAATATTCTCATAGGCATTATTAGCAATGTTAAGTTGAG  150
      |  |||||||||||||||||||||||||||||||||||||||||  ||||
seq2  A--TCATCTCTAAATATTCTCATAGGCATTATTAGCAATGTTAAAGTGAG  136

seq1  AATTGTTGTCTGTTAAACCTAAGAGGATCATTAGAGAGGACAGGATTTTT  200
      |||   ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAT--GTGTCTGTTAAACCTAAGAGGATCATTAGAGAGGACAGGATTTTT  184

seq1  CATTATCTGAGACTATTAATATAAATACATTTGTATAATATTATGTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCTGAGACTATTAATATAAATACATTTGTATAATATTATGTAGTA  234

seq1  CTATTATAATAAATAAATTTAATTCTATTATTTAAAAAGTAAGCTCCGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATAATAAATAAATTTAATTCTATTATTTAAAAAGTAAGCTCCGCC  284

seq1  ATGTACAACCATCTCATCTCTTTGAAGCACAAAATGGTAGTTTGGATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAACCATCTCATCTCTTTGAAGCACAAAATGGTAGTTTGGATTCA  334

seq1  TTTCAGTGTATTGAGATCTATACTCAACTTGGATAAGGCTAGCACACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGTATTGAGATCTATACTCAACTTGGATAAGGCTAGCACACATA  384

seq1  TCTCTGAGGGGGTATCTAATTTGGCTTAGTACCAGGCATGCCTGTGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGGGGGTATCTAATTTGGCTTAGTACCAGGCATGCCTGTGGGAG  434

seq1  TGTAAGTTATTTAGATTATGCTAATAGATGTAGATCGACCCATCCTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTTATTTAGATTATGCTAATAGATGTAGATCGACCCATCCTAATT  484

seq1  TGGGTAGGACTATTCCCTGAACAAGGAATGAGGAAGATGCAGAAGATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGGACTATTCCCTGAACAAGGAATGAGGAAGATGCAGAAGATGGA  534

seq1  GAACATGAGGTTATCTTTAGAAGTCAAGTAAGCATTCCCTGCTCTCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGAGGTTATCTTTAGAAGTCAAGTAAGCATTCCCTGCTCTCCTCT  584

seq1  GATTGTTGCCTCCTCCTCCATCCCCTGCTGTTCTGACTTGCTCAGCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTGCCTCCTCCTCCATCCCCTGCTGTTCTGACTTGCTCAGCATGA  634

seq1  TGAAGAATGAGTTCTAAGCCTTATAATGGCCAAAATGATGGGTCCTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATGAGTTCTAAGCCTTATAATGGCCAAAATGATGGGTCCTTTTA  684

seq1  TTTTCTTGCTTACACTCTAAGTAAAAGAAGATTTATTGTATTACATGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGCTTACACTCTAAGTAAAAGAAGATTTATTGTATTACATGGTA  734

seq1  ATCATATGCAATACATTAACGACATTAATTACATGTAACACAATCTGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATGCAATACATTAACGACATTAATTACATGTAACACAATCTGATT  784

seq1  GTTTACCAATTGATTACCCAATGCCCTGTTCATTTTTTTTTTTTTTGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCAATTGATTACCCAATGCCCTGTTCATTTTTTTTTTTTTTGCAA  834

seq1  TTCTTGTCTTTATTGCACACAAACAAAACTACCTTTGTCTTATGAAGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTCTTTATTGCACACAAACAAAACTACCTTTGTCTTATGAAGACT  884

seq1  TATTACTAAATAGCATTCAAATCAATGTGTATTTTCTACTGCTGTGGCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTAAATAGCATTCAAATCAATGTGTATTTTCTACTGCTGTGGCCC  934

seq1  TAACTCCAATCTTACCATTGACTTACTGGGACATATAACCAATCCATCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCAATCTTACCATTGACTTACTGGGACATATAACCAATCCATCAA  984

seq1  CCCATGTCAATCAAAATGTCTTAACTTCTTTATGTTTCTCCAGTCTTTCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTCAATCAAAATGTCTTAACTTCTTTATGTTTCTCCAGTCTTTCC  1034

seq1  TCCTCCCTTCCCTTAGTTTACTCTTTCTAGTAGCAATGAGTCCTTTCCCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTTCCCTTAGTTTACTCTTTCTAGTAGCAATGAGTCCTTTCCCA  1084

seq1  AATATACATGTAAACATTTTTAGAATTC  1128
      ||||||||||||||||||||||||||||
seq2  AATATACATGTAAACATTTTTAGAATTC  1112


seq1: chr7_59646000_59647123
seq2: B6Ng01-295E11.g_66_1185

seq1  GAATTCCTGAGTGTGCAAAGGAGTGCATCTCTGGGTCTGTATCTGTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGTGTGCAAAGGAGTGCATCTCTGGGTCTGTATCTGTTTCT  50

seq1  TATGGCTTTTGTGGGCTTTTTTCCTGTTTCATTTGTTTTACTCTAATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTTTGTGGGCTTTTTTCCTGTTTCATTTGTTTTACTCTAATGGG  100

seq1  TGTTTTTGTCTTACTTTCTTTTAATTATCTTCTAGAGTCCTGCTCATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGTCTTACTTTCTTTTAATTATCTTCTAGAGTCCTGCTCATTTT  150

seq1  CTAATAACAAAAAGGTGGGTGGATCTCTCTGGGAAGGGAGGTGGTGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAACAAAAAGGTGGGTGGATCTCTCTGGGAAGGGAGGTGGTGAAGA  200

seq1  ACTGCTTAGATGAGGGGAAACTGTAGACAAGATTTATATTTTTAAAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTAGATGAGGGGAAACTGTAGACAAGATTTATATTTTTAAAAGTT  250

seq1  TATTTTCAATAAAAGAAAAAAATCCATTTTTGATGAAAAATATTTTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAATAAAAGAAAAAAATCCATTTTTGATGAAAAATATTTTAATT  300

seq1  TAAGGAATTAAAATATAATTACATTATTTCCTTCTTCCCTTTCCTCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAATTAAAATATAATTACATTATTTCCTTCTTCCCTTTCCTCCCTC  350

seq1  CAGCCCCCTTGATCTGGAGCCCATTTTGATCTACACAGACTCATTATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCCTTGATCTGGAGCCCATTTTGATCTACACAGACTCATTATAGG  400

seq1  CAAAAAGAAAGGACCATAGCAAATTATGAACATTCCACATGTTTCCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAAAGGACCATAGCAAATTATGAACATTCCACATGTTTCCTATT  450

seq1  TGGACACAACACACATTATTTTCATATTTTACAGCTTTAGATCAAAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACAACACACATTATTTTCATATTTTACAGCTTTAGATCAAAAGCA  500

seq1  TATTTTAGCTTATCTTCAAAGGAATAAACAAGCTGACAAATATGTACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGCTTATCTTCAAAGGAATAAACAAGCTGACAAATATGTACAAA  550

seq1  CACAAATACTTAAAATCATATAAACATAAACCATACAGAGCCCTTATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATACTTAAAATCATATAAACATAAACCATACAGAGCCCTTATTCA  600

seq1  GATATATAAACCCATCCACATACATTCACCACACACACACATACACACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATAAACCCATCCACATACATTCACCACACACACACATACACACAC  650

seq1  ACACACACACACACACACACAGGCGTTCATATGTTGATGCAGACCTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACAGGCGTTCATATGTTGATGCAGACCTAAAA  700

seq1  ACACACATACATTTACCCCCACACCATATATATGCACATGCACATGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATACATTTACCCCCACACCATATATATGCACATGCACATGAATG  750

seq1  TGTTTCAGTACTCATAGACATATATGAGCTGATACAAATTCAAACAATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGTACTCATAGACATATATGAGCTGATACAAATTCAAACAATCT  800

seq1  TACAGGTGCACACACATGCACATGTTTTGCCTCTGATATAGACTAACTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTGCACACACATGCACATGTTTTGCCTCTGATATAGACTAACTCA  850

seq1  CTGATTGGAGACTTTTAGTATGTAGAAGGCCATGGAAACAACTTTTCAAT  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTGATTGGAGACTTTTAGTATGTAGAAGGCCATGGAAACAAC-TTTCAAT  899

seq1  TATCTTTAGGAATCTGAGAAATTTGATGTATTTCCAAAATAAGTAACTCT  950
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  TATCTTTAGGAATCTGAG-AATTTGATGTATTTCCCAAATAAGTAACTCT  948

seq1  GTGTACCATTTACTCAGTGTGCTTCTTACTGTGGAATTTCTAGGGTCACT  1000
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  GTGTACCA-TTACTCAGTGTGCTTC-TACTGTGGAATTTCTAGGGTCACT  996

seq1  TGGTGATTTTTAACAGACGTTGCATGTAGATTTACACTTGATTCTATGAA  1050
      |||||||||||||||||||||||||||||| |||||| |||||||||| |
seq2  TGGTGATTTTTAACAGACGTTGCATGTAGA-TTACAC-TGATTCTATG-A  1043

seq1  GTCCAGAGAAG-ACACCAAATGGCAGA-TTTCAAGAG-ATATTTTAAGTG  1097
      ||||||||||| ||||| ||| ||||| ||||||||| ||||||| ||||
seq2  GTCCAGAGAAGAACACC-AATTGCAGATTTTCAAGAGAATATTTT-AGTG  1091

seq1  A-GGAGAGA-TCTTTCCAGCCTGATTTAC  1124
      | ||||||| |||||||||||||| ||||
seq2  AGGGAGAGATTCTTTCCAGCCTGAATTAC  1120


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