BAC Information

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BAC

Clone NameB6Ng01-295H06
Chromosome7 (Build37)
Map Location 62,279,021 - 62,382,297
singlet/doubletdoublet
Overlap geneLuzp2
Upstream geneMrps33p, LOC622146
Downstream geneLOC668796, Siglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295H06.bB6Ng01-295H06.g
ACCGA091312GA091313
length1,0791,099
definitionB6Ng01-295H06.b B6Ng01-295H06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,381,219 - 62,382,297)(62,279,021 - 62,280,133)
sequence
gaattctcaactgaggaaatctggatggctgagaagcacctaaagaaaga
tctgtttctaaactaagttggagtctacttgaagttcactttatcatttt
gttttgctatttttatttttctcagaacaggatttcatatatctcagggt
agcaggaaactggttatataaccaactctgatcttgatttttggtcttga
ttataactaccattatatcagacttctatgctgtgaattaattattttga
agaatctgtataaaattgaaaaattagatatgaggcctcagatattgtaa
tttggaaaaaatgctcttgaaatgtaatttatagcacaattttctcatac
ttgaaattgtaatttcaatactttcatagtggtctagttaaaatataaag
tcagatattaaatacagaaaaataaatcctcagctacaaacagaacccac
acaggcaagatgcagtgatgcgaaaagaaagtgattcttaatttgggata
aaagcacatgctttgtgaaaaaactcaaaatgcctgaaacaaatgaatgc
ctttcatttttagcatattaaaaatttcaggaacaggtagctaacttttc
aacattcctaaaatgtcattgttgaaaaagatattccaatattcctgatc
aactgtctcaaagacgggtccaaatcctttgtcattatcacaataccact
ggtctcaaaattttataaattttctaaaatgtttgcatattacaaagcac
attaaaatgaccttttcttcatactgatatttgtaagaatacagtagaag
attataaaagataggatcaatttataccttatcaaattctataaaataca
ggtaaatgcaaccaatatttatgacaacttattttttttctctacaataa
agtaaatagagagtaatatttctaaagtttgtgggtatgaaatggacata
gtctaaccatcttggctaaataacagcagcatggacactgaaagtagtcc
tgcccttatgttgacaggggtgaccttgaactcctgatcttctacatcac
tccttgactgttgggattcagatatgcac
gaattctttcttcttgaattctacaacaggtttttttttcctgattttta
gaaactataaagatatctgtaacaaggaatatttcccgactctgcaagaa
tcctaagaccctggcctgagggagaccagtatgagaaatcaattctctta
gctttggaatcacagattttcttcaacagaattacagtgtttgaagttgc
taagactccatttctgtagtgcttagataatcattttgctataacttaat
aactgcgttcattgttaattattaatggctattaattaaaattctggaga
cttgcactttcttgaaaacaggaagtttttgccaaatcttcatggtcaaa
ggacttttaaaacacattctttgaaatatcctttaaaaacaaagaacctc
acttcccaattctagattttgcttttaatctgctttaaataaattatgtt
ctatgaagcttacttatgttgtgggctttttaactacacggattccattc
caagtcactatatgagtcctaaaagggatgtttgttgggtcattttggat
ttttgcaacattagtaaaagtttaaaactatataacattgttcatgattt
caatttatttcctctctcatctacttcaaaatatcttcacatgatatgtg
tttctacaagtttaatattctttttcatctatcacaaaggagaagtagaa
tgggagctaacattcagaataggcttcataaactctgcaagcatgtttta
ggttccattatgctatctcatgccaaacaaaaaacctttgggcatcgggg
ctacccgatgccatgatctaaggtacaaggttgtttcaatctgaaattta
tcatattctgtaagtccttacacttccatccagttgtagaagagaggcat
gacttgaaatgtaaagggagcataaattagaaaatgtagacttatttaat
tagtaggtggtaggttgaaaatcccacagtcacccatccatgcagattct
gttcagaaaacatagccagcaggtgcaaacttgtcatgcacgagttccac
tgcagtagatcatctggatcattccattgaacctacaagatacagaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62381219_62382297
seq2: B6Ng01-295H06.b_46_1124 (reverse)

seq1  GTGCATATCTGAATCCCAACAGTCAAGGAGTGATGGTAGGAAGATCAGGA  50
      |||||||||||||||||||||||||||||||||| ||| |||||||||||
seq2  GTGCATATCTGAATCCCAACAGTCAAGGAGTGAT-GTA-GAAGATCAGGA  48

seq1  GTTCAAGGTCACCCCTGTCAACATAA-GGCAGGACTACCTTCAGTGTCCA  99
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  GTTCAAGGTCACCCCTGTCAACATAAGGGCAGGACTACTTTCAGTGTCCA  98

seq1  TGCTGCTGTTATTTAGCCAAGATGGTTAGACTATGTCCATTTCATACCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGTTATTTAGCCAAGATGGTTAGACTATGTCCATTTCATACCCA  148

seq1  CAAACTTTAGAAATATTACTCTCTATTTACTTTATTGTAGAG-AAAAAAA  198
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAAACTTTAGAAATATTACTCTCTATTTACTTTATTGTAGAGAAAAAAAA  198

seq1  TAAGTTGTCATAAATATTGGTTGCATTTACCTGTATTTTATAGAATTTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGTCATAAATATTGGTTGCATTTACCTGTATTTTATAGAATTTGA  248

seq1  TAAGGTATAAATTGATCCTATCTTTTATAATCTTCTACTGTATTCTTACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTATAAATTGATCCTATCTTTTATAATCTTCTACTGTATTCTTACA  298

seq1  AATATCAGTATGAAGAAAAGGTCATTTTAATGTGCTTTGTAATATGCAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAGTATGAAGAAAAGGTCATTTTAATGTGCTTTGTAATATGCAAA  348

seq1  CATTTTAGAAAATTTATAAAATTTTGAGACCAGTGGTATTGTGATAATGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGAAAATTTATAAAATTTTGAGACCAGTGGTATTGTGATAATGA  398

seq1  CAAAGGATTTGGACCCGTCTTTGAGACAGTTGATCAGGAATATTGGAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATTTGGACCCGTCTTTGAGACAGTTGATCAGGAATATTGGAATA  448

seq1  TCTTTTTCAACAATGACATTTTAGGAATGTTGAAAAGTTAGCTACCTGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCAACAATGACATTTTAGGAATGTTGAAAAGTTAGCTACCTGTT  498

seq1  CCTGAAATTTTTAATATGCTAAAAATGAAAGGCATTCATTTGTTTCAGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAATTTTTAATATGCTAAAAATGAAAGGCATTCATTTGTTTCAGGC  548

seq1  ATTTTGAGTTTTTTCACAAAGCATGTGCTTTTATCCCAAATTAAGAATCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGTTTTTTCACAAAGCATGTGCTTTTATCCCAAATTAAGAATCA  598

seq1  CTTTCTTTTCGCATCACTGCATCTTGCCTGTGTGGGTTCTGTTTGTAGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTCGCATCACTGCATCTTGCCTGTGTGGGTTCTGTTTGTAGCT  648

seq1  GAGGATTTATTTTTCTGTATTTAATATCTGACTTTATATTTTAACTAGAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTTATTTTTCTGTATTTAATATCTGACTTTATATTTTAACTAGAC  698

seq1  CACTATGAAAGTATTGAAATTACAATTTCAAGTATGAGAAAATTGTGCTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGAAAGTATTGAAATTACAATTTCAAGTATGAGAAAATTGTGCTA  748

seq1  TAAATTACATTTCAAGAGCATTTTTTCCAAATTACAATATCTGAGGCCTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACATTTCAAGAGCATTTTTTCCAAATTACAATATCTGAGGCCTC  798

seq1  ATATCTAATTTTTCAATTTTATACAGATTCTTCAAAATAATTAATTCACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAATTTTTCAATTTTATACAGATTCTTCAAAATAATTAATTCACA  848

seq1  GCATAGAAGTCTGATATAATGGTAGTTATAATCAAGACCAAAAATCAAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGAAGTCTGATATAATGGTAGTTATAATCAAGACCAAAAATCAAGA  898

seq1  TCAGAGTTGGTTATATAACCAGTTTCCTGCTACCCTGAGATATATGAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTTGGTTATATAACCAGTTTCCTGCTACCCTGAGATATATGAAAT  948

seq1  CCTGTTCTGAGAAAAATAAAAATAGCAAAACAAAATGATAAAGTGAACTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCTGAGAAAAATAAAAATAGCAAAACAAAATGATAAAGTGAACTT  998

seq1  CAAGTAGACTCCAACTTAGTTTAGAAACAGATCTTTCTTTAGGTGCTTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGACTCCAACTTAGTTTAGAAACAGATCTTTCTTTAGGTGCTTCT  1048

seq1  CAGCCATCCAGATTTCCTCAGTTGAGAATTC  1079
      |||||||||||||||||||||||||||||||
seq2  CAGCCATCCAGATTTCCTCAGTTGAGAATTC  1079

seq1: chr7_62279021_62280133
seq2: B6Ng01-295H06.g_68_1166

seq1  GAATTCTTTCTTCTTGAATTCTACAACAGGTTTTTTTTTCCTGATTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCTTGAATTCTACAACAGGTTTTTTTTTCCTGATTTTTA  50

seq1  GAAACTATAAAGATATCTGTAACAAGGAATATTTCCCGACTCTGCAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATAAAGATATCTGTAACAAGGAATATTTCCCGACTCTGCAAGAA  100

seq1  TCCTAAGACCCTGGCCTGAGGGAGACCAGTATGAGAAATCAATTCTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGACCCTGGCCTGAGGGAGACCAGTATGAGAAATCAATTCTCTTA  150

seq1  GCTTTGGAATCACAGATTTTCTTCAACAGAATTACAGTGTTTGAAGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGAATCACAGATTTTCTTCAACAGAATTACAGTGTTTGAAGTTGC  200

seq1  TAAGACTCCATTTCTGTAGTGCTTAGATAATCATTTTGCTATAACTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTCCATTTCTGTAGTGCTTAGATAATCATTTTGCTATAACTTAAT  250

seq1  AACTGCGTTCATTGTTAATTATTAATGGCTATTAATTAAAATTCTGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCGTTCATTGTTAATTATTAATGGCTATTAATTAAAATTCTGGAGA  300

seq1  CTTGCACTTTCTTGAAAACAGGAAGTTTTTGCCAAATCTTCATGGTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCACTTTCTTGAAAACAGGAAGTTTTTGCCAAATCTTCATGGTCAAA  350

seq1  GGACTTTTAAAACACATTCTTTGAAATATCCTTTAAAAACAAAGAACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTAAAACACATTCTTTGAAATATCCTTTAAAAACAAAGAACCTC  400

seq1  ACTTCCCAATTCTAGATTTTGCTTTTAATCTGCTTTAAATAAATTATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCAATTCTAGATTTTGCTTTTAATCTGCTTTAAATAAATTATGTT  450

seq1  CTATGAAGCTTACTTATGTTGTGGGCTTTTTAACTACACGGATTCCATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAGCTTACTTATGTTGTGGGCTTTTTAACTACACGGATTCCATTC  500

seq1  CAAGTCACTATATGAGTCCTAAAAGGGATGTTTGTTGGGTCATTTTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCACTATATGAGTCCTAAAAGGGATGTTTGTTGGGTCATTTTGGAT  550

seq1  TTTTGCAACATTAGTAAAAGTTTAAAACTATATAACATTGTTCATGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAACATTAGTAAAAGTTTAAAACTATATAACATTGTTCATGATTT  600

seq1  CAATTTATTTCCTCTCTCATCTACTTCAAAATATCTTCACATGATATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTATTTCCTCTCTCATCTACTTCAAAATATCTTCACATGATATGTG  650

seq1  TTTCTACAAGTTTAATATTCTTTTTCATCTATCACAAAGGAGAAGTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACAAGTTTAATATTCTTTTTCATCTATCACAAAGGAGAAGTAGAA  700

seq1  TGGGAGCTAACATTCAGAATAGGCTTCATAAACTCTGCAAGCATGTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTAACATTCAGAATAGGCTTCATAAACTCTGCAAGCATGTTTTA  750

seq1  GGTTCCATTATGCTATCTCATGCCAAACAAAAAACCTTTGGGCATCGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCATTATGCTATCTCATGCCAAACAAAAAACCTTTGGGCATCGGGG  800

seq1  CTACCCGATGCCATGATCTAAGGTACAAGGTTGTTTCAATCTGAAATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCGATGCCATGATCTAAGGTACAAGGTTGTTTCAATCTGAAATTTA  850

seq1  TCATATTCTGTAAGTCCTTACACTTCCATCCAGTTGTAGAAGAGAGGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTCTGTAAGTCCTTACACTTCCATCCAGTTGTAGAAGAGAGGCAT  900

seq1  GACTTGAAATGTAAA-GGAGCATAAATTAGAAAATGTAGACTTATTTAAT  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GACTTGAAATGTAAAGGGAGCATAAATTAGAAAATGTAGACTTATTTAAT  950

seq1  TAAGTAGGTGGTAGGTTGAAAAATCCCACAGTCACCCATCCATGCAGGAT  999
      | |||||||||||||||| ||||||||||||||||||||||||||| |||
seq2  T-AGTAGGTGGTAGGTTG-AAAATCCCACAGTCACCCATCCATGCA-GAT  997

seq1  TCTGTTCAGGAAAAACATAGCCCAGCAGTTGCAAACTTGTCATGCACGGA  1049
      |||||||||  ||||||||| ||||||| |||||||||||||||||||  
seq2  TCTGTTCAG--AAAACATAG-CCAGCAGGTGCAAACTTGTCATGCACG--  1042

seq1  AGTTTCCACTGCAGTTAGAATCATCTTGAATCATTTCCCATTGGAACTTA  1099
      || ||||||||||| ||| |||||| || ||||||  ||||| |||| ||
seq2  AG-TTCCACTGCAG-TAG-ATCATC-TGGATCATT--CCATT-GAACCTA  1085

seq1  CAAGATACAGAATT  1113
      ||||||||||||||
seq2  CAAGATACAGAATT  1099