BAC Information

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BAC

Clone NameB6Ng01-296I23
Chromosome7 (Build37)
Map Location 36,388,709 - 36,498,489
singlet/doubletdoublet
Overlap geneAnkrd27, Pdcd5, Dpy19l3
Upstream geneKctd15, Chst8, Pepd, Cebpg, Cebpa, Slc7a10, Wdr88, Gpatch1, Rhpn2, C230052I12Rik, Ccdc123, Slc7a9, 2410004F06Rik, Nudt19, Rgs9bp
Downstream genezfp507, LOC100043872, EG668988, LOC668507, Tshz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296I23.bB6Ng01-296I23.g
ACCGA092142GA092143
length1,090265
definitionB6Ng01-296I23.b B6Ng01-296I23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,388,709 - 36,389,807)(36,498,225 - 36,498,489)
sequence
gaattctagaaggttcttgcaaagcaggaggcccagatgaacctgatgaa
gcaggccgtagaggtaaggagagagtgaagggcagtgactgggagactct
gtgtcaaccccaatacataccacaagcctgtcttttgaacccacagatgt
atgtccatcacgatatttacgacctgatctttaaatacgtggggaccatg
gaggcgagcgaggtaggttctttgttaccagtctttattctccgggatga
gagccttaacctaagaaattccaagtgttggggctggagagatagttcaa
tactgcttttgcagaagacctaagtgtgttcctagcaccaatgaagggtg
gctcacacattccataactgcaggtctgggagatctagcatcttctggct
cctgtggctacctgcaatcgcatgtaccagaatagctggagctatgtaga
gagaccctgtctctaaacagccagccaaataaacaaaagtcttaagtgaa
agaaatttgaaatctgttgctaggatgccgcctttaacaaaatcacgaga
agccttcaagatctccagcagaaagacatcggcgtgaaacccgagttcag
gtgagtcggtcccacagctccgggaagtccagcacgctcacggctgggct
ccatctcccccacccctccacttggcagccgtggtgaccactgattagat
gaggttacaaccaaggagttgtacacttggtcccagtgatgcccgacagc
cgaagttgagctgcggctgccttggttccctcctgtgtttgtgggccagt
gtgccagctgggtgggagctaaggggaagagggtttggtaaaaccggtct
ccgagtgggcatgcgactctcagctgggccctacacagaagccatcgacc
ctcatctgccactcggagagaacccagacctcgaggctctcactctcggg
caagcttcattagggtaaatatgtctgaagtattgatgtggaagccgctc
ctcacgcttggttatttccatctggcttttaataaattttaagtaatatt
ttttgttgccatataaaaattttcccttttaattaattta
tcagcctcaagagagacactgtctccaacaaacgagggacagggcagcac
caggagtagctctgagctcaagaaataagaaatcttctctgggaccacgc
agatggtcactctgaccaagggggatgggacttaccagatctggattaac
gagcatggatctgttgttgtttctagatccgagtcatagggtaccaatat
tgtgattataaaaagataaagagtattaatatatgttctatgggagtgtg
gtgagatgtggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_36388709_36389807
seq2: B6Ng01-296I23.b_47_1136

seq1  GAATTCTAGAAGGTTCTTGCAAAGCAGGAGGCCCAGATGAACCTGATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAGGTTCTTGCAAAGCAGGAGGCCCAGATGAACCTGATGAA  50

seq1  GCAGGCCGTAGAGGTAAGGAGAGAGTGAAGGGCAGTGACTGGGAGACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCGTAGAGGTAAGGAGAGAGTGAAGGGCAGTGACTGGGAGACTCT  100

seq1  GTGTCAACCCCAATACATACCACAAGCCTGTCTTTTGAACCCACAGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAACCCCAATACATACCACAAGCCTGTCTTTTGAACCCACAGATGT  150

seq1  ATGTCCATCACGATATTTACGACCTGATCTTTAAATACGTGGGGACCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATCACGATATTTACGACCTGATCTTTAAATACGTGGGGACCATG  200

seq1  GAGGCGAGCGAGGTAGGTTCTTTGTTACCAGTCTTTATTCTCCGGGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGAGCGAGGTAGGTTCTTTGTTACCAGTCTTTATTCTCCGGGATGA  250

seq1  GAGCCTTAACCTAAGAAATTCCAAGTGTTGGGGCTGGAGAGATAGTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTAACCTAAGAAATTCCAAGTGTTGGGGCTGGAGAGATAGTTCAA  300

seq1  TACTGCTTTTGCAGAAGACCTAAGTGTGTTCCTAGCACCAATGAAGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTTTTGCAGAAGACCTAAGTGTGTTCCTAGCACCAATGAAGGGTG  350

seq1  GCTCACACATTCCATAACTGCAGGTCTGGGAGATCTAGCATCTTCTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACACATTCCATAACTGCAGGTCTGGGAGATCTAGCATCTTCTGGCT  400

seq1  CCTGTGGCTACCTGCAATCGCATGTACCAGAATAGCTGGAGCTATGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGCTACCTGCAATCGCATGTACCAGAATAGCTGGAGCTATGTAGA  450

seq1  GAGACCCTGTCTCTAAACAGCCAGCCAAATAAACAAAAGTCTTAAGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCTGTCTCTAAACAGCCAGCCAAATAAACAAAAGTCTTAAGTGAA  500

seq1  AGAAATTTGAAATCTGTTGCTAGGATGCCGCCTTTAACAAAATCACGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTGAAATCTGTTGCTAGGATGCCGCCTTTAACAAAATCACGAGA  550

seq1  AGCCTTCAAGATCTCCAGCAGAAAGACATCGGCGTGAAACCCGAGTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCAAGATCTCCAGCAGAAAGACATCGGCGTGAAACCCGAGTTCAG  600

seq1  GTGAGTCGGTCCCACAGCTCCGGGAAGTCCAGCACGCTCACGGCTGGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCGGTCCCACAGCTCCGGGAAGTCCAGCACGCTCACGGCTGGGCT  650

seq1  CCATCTCCCCCACCCCTCCACTTGGCAGCCGTGGTGACCACTGATTAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCCCCACCCCTCCACTTGGCAGCCGTGGTGACCACTGATTAGAT  700

seq1  GAGGTTACAACCAAGGAGTTGTACACTTGGTCCCAGTGATGCCCGACAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTACAACCAAGGAGTTGTACACTTGGTCCCAGTGATGCCCGACAGC  750

seq1  CGAAGTTGAGCTGCGGCTGCCTTGGTTCCCTCCTGTGTTTGTGGGCCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGTTGAGCTGCGGCTGCCTTGGTTCCCTCCTGTGTTTGTGGGCCAGT  800

seq1  GTGCCAGCTGGGTGGGAGCTAAGGGGAAGAGGGTTTGGTAAAACCGGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGCTGGGTGGGAGCTAAGGGGAAGAGGGTTTGGTAAAACCGGTCT  850

seq1  CCGAGTGGGCATGCGACTCTCAGCTGGGCCCTACACAGAAGCCATCGACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTGGGCATGCGACTCTCAGCTGGGCCCTACACAGAAGCCATCGACC  900

seq1  CTCATCTGCCACTCGGAGAGAACCCAGACCTCGAGGCTCTCACTCTCGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGCCACTCGGAGAGAACCCAGACCTCGAGGCTCTCACTCTCGGG  950

seq1  CAAGCTTCATTAGGGTAAATATGTCTGAAGTATTGATGTGGAAGCCGCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTCATTAGGGTAAATATGTCTGAAGTATTGATGTGGAAGCCGCTC  1000

seq1  CTCACGCTTGGGTTATTTCCATCTTGGGCTTTTATTAAATTTTTAAAAGT  1050
      ||||||||| ||||||||||||||  |||||||| ||||||||   ||| 
seq2  CTCACGCTT-GGTTATTTCCATCT--GGCTTTTAATAAATTTT---AAG-  1043

seq1  TAATATTTTTTGTTGCCATATAAAATTTTTTCCTTTTTAATTTAATTTA  1099
      ||||||||||||||||||||||||| |||| ||||||  | ||||||||
seq2  TAATATTTTTTGTTGCCATATAAAAATTTTCCCTTTT--AATTAATTTA  1090

seq1: chr7_36498225_36498489
seq2: B6Ng01-296I23.g_73_337 (reverse)

seq1  TTCCCCACATCTCACCACACTCCCATAGAACATATATTAATACTCTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACATCTCACCACACTCCCATAGAACATATATTAATACTCTTTAT  50

seq1  CTTTTTATAATCACAATATTGGTACCCTATGACTCGGATCTAGAAACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATAATCACAATATTGGTACCCTATGACTCGGATCTAGAAACAAC  100

seq1  AACAGATCCATGCTCGTTAATCCAGATCTGGTAAGTCCCATCCCCCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATCCATGCTCGTTAATCCAGATCTGGTAAGTCCCATCCCCCTTGG  150

seq1  TCAGAGTGACCATCTGCGTGGTCCCAGAGAAGATTTCTTATTTCTTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTGACCATCTGCGTGGTCCCAGAGAAGATTTCTTATTTCTTGAGC  200

seq1  TCAGAGCTACTCCTGGTGCTGCCCTGTCCCTCGTTTGTTGGAGACAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCTACTCCTGGTGCTGCCCTGTCCCTCGTTTGTTGGAGACAGTGT  250

seq1  CTCTCTTGAGGCTGA  265
      |||||||||||||||
seq2  CTCTCTTGAGGCTGA  265