BAC Information

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BAC

Clone NameB6Ng01-296N17
Chromosome7 (Build37)
Map Location 128,016,877 - 128,136,634
singlet/doubletdoublet
Overlap geneEef2k, Polr3e, Cdr2, 4933427G17Rik
Upstream geneDcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426
Downstream geneEG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2, Usp31, Scnn1g, Scnn1b, Cog7, Gga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296N17.bB6Ng01-296N17.g
ACCGA092361GA092362
length1,101613
definitionB6Ng01-296N17.b B6Ng01-296N17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,135,534 - 128,136,634)(128,016,877 - 128,017,487)
sequence
gaattcatgccaatcctcctgcctcaacctcctgggtaccatcagatctg
tcttgttctttcttttctccttccattttctcagtctcttgagatgaatt
ccactgtgcagtcagcctcagaaaagggaaaccatgcccaatgattaaag
tgggttacagccatttagtcaaacattgacaactctcagctcatgaaagt
atcatttatctagaaatgaagaatacattaaaacagctttgtatttcata
tgttcttgtgggggattgaggaggaaggctgttgaattctgttggccata
tttaggaaaagactatttactggctgaatatttagcttagtgggagcact
aactacgcaaggccctaggtctaatccacagtactatgagagagcgaaag
agtgagagagcaagaaagagagaaagagagagctattatttgacaaagaa
cttgtatccggaatatacaaagtatttctgcaactcaatatatgaaggtt
gactaatacaccaattaaaaagttgacaaaataattgaataaatgatgta
ccaatacatctttaaatgactgaataaagcaaaaatatacattcaaagga
agccatttacttcttccacagctttgcttatgcttatattcaaagccaaa
tatttaaaactttgggctgtggagatggcttggcaccaaacctaaccacc
tgagatcaatccctgggacctacatgagtagagagagaaatggggcctct
aagctgtcttctgaccaccacagaccaccctgacacacacaaatatacac
aatagtctaggcacagggctctcaatgtcagtttgctctacttagcaagt
tccaggccagccaggactgtacagtgagacctatctcaaaacacacacat
gcacacacacacacaaagtaagtaaataaaaaattttagaatacattttt
taaaatgggcatgctgcttggctctcaacatgctcgtccgttgtcacttt
tcatttgctctcccatcgtttctgtggagccctgtacagtgactggctct
gactgtttgttttctatggagccctgtacatgactgggcctctgactctt
a
gaattccatctcgaggacatcgccacagaacatgctactcggcacaggtc
agcagtttgtcccaggggctttgaggagtccttgcgggagattggggtag
ggggggacttggggtcctgcttctggtcaaagaaaaggaactaatatagc
accccaatttcagattcttacagcctgtgggattgttagaagtagagaga
tccaaccagttaagtctgtgtagacgttcaaaattggaagtaatctgaag
tgtgaaaaacttttgattctaaatgttttagatggggagagggaggcagg
gaaggtgcatctaggttccgtttgaagttggttgagaggtgggcagcttc
tcagggcaagtcaggggtccacgttccttctgaactgtgacaccatcatc
ccaacacttgtccttgcaaacaccagtagagacagacagtatcaagcagg
ttttgacccctggtccaggtagcaacctcacttttcctttggctagcact
cttgccctctccatcattcctgctctatccttcaaggagatggctgcaga
gcctcctgtgtgcctccttcctactcaggaagcccacctctcagtgtggg
gaaggatatgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_128135534_128136634
seq2: B6Ng01-296N17.b_49_1149 (reverse)

seq1  TAAGAGTCAGA-GCCCAGTCAATGTACAGGGCTCCATAG-AAACAAACAG  48
      ||||||||||| |||||||| |||||||||||||||||| ||||||||||
seq2  TAAGAGTCAGAGGCCCAGTC-ATGTACAGGGCTCCATAGAAAACAAACAG  49

seq1  TCAGAGCCCAGTCACTGTACAGGGCTCCACAGAAACGATGGGAGAGCAAA  98
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAG-CCAGTCACTGTACAGGGCTCCACAGAAACGATGGGAGAGCAAA  98

seq1  TGAAAAGTGAACAACGGACGAGCATGTTGAGAGCCAAGCAGCATG-CCAT  147
      ||||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  TGAAAAGTG-ACAACGGACGAGCATGTTGAGAGCCAAGCAGCATGCCCAT  147

seq1  TTTAAAAAATGTATTCTAAAATTTTTTATTTACTTACTTTGTGTGTGTGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAATGTATTCTAAAATTTTTTATTTACTTACTTTGTGTGTGTGT  197

seq1  GTGCATGTGTGTGTTTTGAGATAGGTCTCACTGTACAGTCCTGGCTGGCC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTGTGTGTTTTGAGATAGGTCTCACTGTACAGTCCTGGCTGGCC  247

seq1  TGGAACTTGCTAAGTAGAGCAAACTGACATTGAGAGCCCTGTGCCTAGAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTGCTAAGTAGAGCAAACTGACATTGAGAGCCCTGTGCCTAGAC  297

seq1  TATTGTGTATATTTGTGTGTGTCAGGGTGGTCTGTGGTGGTCAGAAGACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGTATATTTGTGTGTGTCAGGGTGGTCTGTGGTGGTCAGAAGACA  347

seq1  GCTTAGAGGCCCCATTTCTCTCTCTACTCATGTAGGTCCCAGGGATTGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAGGCCCCATTTCTCTCTCTACTCATGTAGGTCCCAGGGATTGAT  397

seq1  CTCAGGTGGTTAGGTTTGGTGCCAAGCCATCTCCACAGCCCAAAGTTTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTGGTTAGGTTTGGTGCCAAGCCATCTCCACAGCCCAAAGTTTTA  447

seq1  AATATTTGGCTTTGAATATAAGCATAAGCAAAGCTGTGGAAGAAGTAAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGGCTTTGAATATAAGCATAAGCAAAGCTGTGGAAGAAGTAAAT  497

seq1  GGCTTCCTTTGAATGTATATTTTTGCTTTATTCAGTCATTTAAAGATGTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCTTTGAATGTATATTTTTGCTTTATTCAGTCATTTAAAGATGTA  547

seq1  TTGGTACATCATTTATTCAATTATTTTGTCAACTTTTTAATTGGTGTATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACATCATTTATTCAATTATTTTGTCAACTTTTTAATTGGTGTATT  597

seq1  AGTCAACCTTCATATATTGAGTTGCAGAAATACTTTGTATATTCCGGATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACCTTCATATATTGAGTTGCAGAAATACTTTGTATATTCCGGATA  647

seq1  CAAGTTCTTTGTCAAATAATAGCTCTCTCTTTCTCTCTTTCTTGCTCTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTTTGTCAAATAATAGCTCTCTCTTTCTCTCTTTCTTGCTCTCT  697

seq1  CACTCTTTCGCTCTCTCATAGTACTGTGGATTAGACCTAGGGCCTTGCGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTTCGCTCTCTCATAGTACTGTGGATTAGACCTAGGGCCTTGCGT  747

seq1  AGTTAGTGCTCCCACTAAGCTAAATATTCAGCCAGTAAATAGTCTTTTCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTGCTCCCACTAAGCTAAATATTCAGCCAGTAAATAGTCTTTTCC  797

seq1  TAAATATGGCCAACAGAATTCAACAGCCTTCCTCCTCAATCCCCCACAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGGCCAACAGAATTCAACAGCCTTCCTCCTCAATCCCCCACAAG  847

seq1  AACATATGAAATACAAAGCTGTTTTAATGTATTCTTCATTTCTAGATAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATGAAATACAAAGCTGTTTTAATGTATTCTTCATTTCTAGATAAA  897

seq1  TGATACTTTCATGAGCTGAGAGTTGTCAATGTTTGACTAAATGGCTGTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTTTCATGAGCTGAGAGTTGTCAATGTTTGACTAAATGGCTGTAA  947

seq1  CCCACTTTAATCATTGGGCATGGTTTCCCTTTTCTGAGGCTGACTGCACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTAATCATTGGGCATGGTTTCCCTTTTCTGAGGCTGACTGCACA  997

seq1  GTGGAATTCATCTCAAGAGACTGAGAAAATGGAAGGAGAAAAGAAAGAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATTCATCTCAAGAGACTGAGAAAATGGAAGGAGAAAAGAAAGAAC  1047

seq1  AAGACAGATCTGATGGTACCCAGGAGGTTGAGGCAGGAGGATTGGCATGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGATCTGATGGTACCCAGGAGGTTGAGGCAGGAGGATTGGCATGA  1097

seq1  ATTC  1101
      ||||
seq2  ATTC  1101

seq1: chr7_128016877_128017487
seq2: B6Ng01-296N17.g_69_681

seq1  GAATTCCATCTCGAGGACATCGCCACAGAACATGCTACTCGGCACAGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTCGAGGACATCGCCACAGAACATGCTACTCGGCACAGGTC  50

seq1  AGCAGTTTGTCCCAGGGGCTTTGAGGAGTCCTTGCGGGAGATTGGGGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTTGTCCCAGGGGCTTTGAGGAGTCCTTGCGGGAGATTGGGGTAG  100

seq1  GGGGGGACTTGGGGTCCTGCTTCTGGTCAAAGAAAAGGAACTAATATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGACTTGGGGTCCTGCTTCTGGTCAAAGAAAAGGAACTAATATAGC  150

seq1  ACCCCAATTTCAGATTCTTACAGCCTGTGGGATTGTTAGAAGTAGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAATTTCAGATTCTTACAGCCTGTGGGATTGTTAGAAGTAGAGAGA  200

seq1  TCCAACCAGTTAAGTCTGTGTAGACGTTCAAAATTGGAAGTAATCTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCAGTTAAGTCTGTGTAGACGTTCAAAATTGGAAGTAATCTGAAG  250

seq1  TGTGAAAAACTTTTGATTCTAAATGTTTTAGATGGGGAGAGGGAGGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAAACTTTTGATTCTAAATGTTTTAGATGGGGAGAGGGAGGCAGG  300

seq1  GAAGGTGCATCTAGGTTCCGTTTGAAGTTGGTTGAGAGGTGGGCAGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGCATCTAGGTTCCGTTTGAAGTTGGTTGAGAGGTGGGCAGCTTC  350

seq1  TCAGGGCAAGTCAGGGGTCCACGTTCCTTCTGAACTGTGACACCATCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCAAGTCAGGGGTCCACGTTCCTTCTGAACTGTGACACCATCATC  400

seq1  CCAACACTTGTCCTTGCAAACACCAGTAGAGACAGACAGTATCAAGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACTTGTCCTTGCAAACACCAGTAGAGACAGACAGTATCAAGCAGG  450

seq1  TTTTGACCCCTGGTCCAGGTAGCAACCTCACTTTTCC-TTGGCTAGCACT  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTTGACCCCTGGTCCAGGTAGCAACCTCACTTTTCCTTTGGCTAGCACT  500

seq1  C-TGCCCTCTCCATCATTCCTGCTCTATCCTTCAAGGAGATGGCTGCAGA  548
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCTCTCCATCATTCCTGCTCTATCCTTCAAGGAGATGGCTGCAGA  550

seq1  GCCTCCTGTGTGCCTCCTTCCTACTCAGGAAGCCCACCTCTCAGTGTGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTGTGTGCCTCCTTCCTACTCAGGAAGCCCACCTCTCAGTGTGGG  600

seq1  GAAGGATAGGTCA  611
      |||||||| ||||
seq2  GAAGGATATGTCA  613