BAC Information

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BAC

Clone NameB6Ng01-297P13
Chromosome7 (Build37)
Map Location 47,175,830 - 47,176,939
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100038955, LOC100038967, LOC620018, LOC100038914, EG668531, EG628058, EG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik
Downstream geneEG628161, LOC100039094, 2900093B09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297P13.bB6Ng01-297P13.g
ACCGA093199GA093200
length1,1141,181
definitionB6Ng01-297P13.b B6Ng01-297P13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcataagatattcagtccgatatttcctgaggtattgttgatg
tggtgtgcaaagtttagacaccactgtatagatttcatgtttcactcatt
gtctttcttgttcatgatgcattcaagaaagcacagctttcttagacttc
atagtgcccttgctagttttatggcggctttacataagctacagtcggtt
aaagaagaggatctcaattgagaaaatgtctcaatacaagctgtatggca
ctttcttaattagtgattgatggggagagggcccagcccatatcatccct
ggcctgttggccctaggttctataaaaagaaagctgagtaaaccatggga
agcaagccattaagcagcactctatagcctctgcatcagctcctgcctcc
aggttcctgtcctgattgagtttctggcctgtcttcctttgatgatgaac
aatgatgtggaagtgcaatacaaatgaaccttttcctctccaaattgctt
cggtcattatgtttcatcacagcaattgtgatcctaagacatatgagtta
ggctgcaggaagaagacatttttagctatagaggagtgtctctggttcta
gtcctagagacaccattccttttcttttcgaatgatcatttattgttgaa
catttagtacatttacccattgcacactaatcatagccatctacccatct
ccattcaactcctctagttccccacctcatcttcctcctggctttatttc
cctttttagtttttgttattaataacctcatgagtccaattccattttca
aagtgctatccaaggactcatcgggtcaccttgggctcagcagactccca
ggtgtgtggcacagctagataaagcctggaattatttgcaggtagaaccc
ttgatcccttccctcctttgggttcctccctcatcagcaggttgttactc
atctctgatgttcgttccatctgttttctagaggttttaggagacacagc
catctgctttcttgttaccatgtcatagacattatgacaaaggaggagta
caagcctcagacattgggtcttttctgccacccgcttccctagaggatgt
gggcctggtgtcct
gaattcagaacttttcagctggggaacgagagtaccagtgaatacagctt
tacgaggtaagtctggtcttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggtcttgaattttttctagtgttaga
agcccttttgttccttttcacatgttatcaagtggttaaggcagggcgga
ttctagatgaaattcaggacaatctatcagaagtaaagtggggagagaga
gtaggaacaaagaggaaatatggtacacaaaataagtatacaggcctttc
caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga
gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta
gcagaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg
ggagccagctcttagtagctctgaagcagatgaagaatcctcctctgagg
aaacagactgggaggaagaagcagctcattatgagaaaaaagggtaccag
ccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctggcga
aggccagtttgctgattggcctcagggcagtcggcttcaaggtccgccct
atgcggagtccccgccctgcgtagtgcgtcagccctgcgcagagaggcag
tgcgcagagaggcagtgcgcagactcattcattcccagagaggaacaaag
gaaaatacaacaggcatttccggtctttgaaggagccgagggtgggcgtg
tccacgctccggtagaatacttacaaattaaagaaattgccgagtcggtc
cgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggct
tgcccggcatggcactaactcctgccgactggcaacggttgtaaaagccg
ctctccctagtatgggcaaatatatggaaatggaagagcgctttggcacg
aagctgcacagcgcagccgagcaaacgcagctgctttgactccagaagca
gagaagattgaacttttgactgtacggtcaggaagcctattctgctgatc
aaccaactacattggggggacctatgctaagtccttcacaggctattaag
gacttagaaggcgcccttttcccggagccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_47175830_47176939
seq2: B6Ng01-297P13.b_49_1162 (reverse)

seq1  AGGACAC--AGCCCACATCCTCTAGGGAAAGCGGTGGCAG-AAAGACCCA  47
      |||||||   |||||||||||||||||||   |||||||| |||||||||
seq2  AGGACACCAGGCCCACATCCTCTAGGGAAGCGGGTGGCAGAAAAGACCCA  50

seq1  ATGTCTGAGGCTTGTACT-CTCCTTTGTCATAATTGTTCTAATGACATGG  96
      |||||||||||||||||| |||||||||||||||   ||| |||||||||
seq2  ATGTCTGAGGCTTGTACTCCTCCTTTGTCATAAT--GTCT-ATGACATGG  97

seq1  TAACAAG-AAGCAGATGGCTGTTGTCTCCTAAAACCTCTAGAAAACAGAT  145
      ||||||| ||||||||||||| ||||||||||||||||||||||||||||
seq2  TAACAAGAAAGCAGATGGCTG-TGTCTCCTAAAACCTCTAGAAAACAGAT  146

seq1  GGAACGAACATCAGAGATGAGTAACAACCTGCTGATGAGGGAGGAA-CCA  194
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGAACGAACATCAGAGATGAGTAACAACCTGCTGATGAGGGAGGAACCCA  196

seq1  AAGGAGGGAAGGGATCAA-GGTTCTACCTGCAAATAATTCCAGGCTTTAT  243
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGGAGGGAAGGGATCAAGGGTTCTACCTGCAAATAATTCCAGGCTTTAT  246

seq1  CTAGCTGTGCCACACACCTGGGAGTCTGCTGAGCCCAAGGTGA-CCGATG  292
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTAGCTGTGCCACACACCTGGGAGTCTGCTGAGCCCAAGGTGACCCGATG  296

seq1  AGTCCTTGGATAGCACTTTGAAAATGGAATTGGACTCATGAGGTTATTAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTGGATAGCACTTTGAAAATGGAATTGGACTCATGAGGTTATTAA  346

seq1  TAACAAAAACTAAAAAGGGAAATAAAGCCAGGAGGAAGATGAGGTGGGGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAAACTAAAAAGGGAAATAAAGCCAGGAGGAAGATGAGGTGGGGA  396

seq1  ACTAGAGGAGTTGAATGGAGATGGGTAGATGGCTATGATTAGTGTGCAAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGGAGTTGAATGGAGATGGGTAGATGGCTATGATTAGTGTGCAAT  446

seq1  GGGTAAATGTACTAAATGTTCAACAATAAATGATCATTCGAAAAGAAAAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAATGTACTAAATGTTCAACAATAAATGATCATTCGAAAAGAAAAG  496

seq1  GAATGGTGTCTCTAGGACTAGAACCAGAGACACTCCTCTATAGCTAAAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTGTCTCTAGGACTAGAACCAGAGACACTCCTCTATAGCTAAAAA  546

seq1  TGTCTTCTTCCTGCAGCCTAACTCATATGTCTTAGGATCACAATTGCTGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTTCCTGCAGCCTAACTCATATGTCTTAGGATCACAATTGCTGT  596

seq1  GATGAAACATAATGACCGAAGCAATTTGGAGAGGAAAAGGTTCATTTGTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAACATAATGACCGAAGCAATTTGGAGAGGAAAAGGTTCATTTGTA  646

seq1  TTGCACTTCCACATCATTGTTCATCATCAAAGGAAGACAGGCCAGAAACT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTTCCACATCATTGTTCATCATCAAAGGAAGACAGGCCAGAAACT  696

seq1  CAATCAGGACAGGAACCTGGAGGCAGGAGCTGATGCAGAGGCTATAGAGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGGACAGGAACCTGGAGGCAGGAGCTGATGCAGAGGCTATAGAGT  746

seq1  GCTGCTTAATGGCTTGCTTCCCATGGTTTACTCAGCTTTCTTTTTATAGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTAATGGCTTGCTTCCCATGGTTTACTCAGCTTTCTTTTTATAGA  796

seq1  ACCTAGGGCCAACAGGCCAGGGATGATATGGGCTGGGCCCTCTCCCCATC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGGCCAACAGGCCAGGGATGATATGGGCTGGGCCCTCTCCCCATC  846

seq1  AATCACTAATTAAGAAAGTGCCATACAGCTTGTATTGAGACATTTTCTCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTAATTAAGAAAGTGCCATACAGCTTGTATTGAGACATTTTCTCA  896

seq1  ATTGAGATCCTCTTCTTTAACCGACTGTAGCTTATGTAAAGCCGCCATAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGATCCTCTTCTTTAACCGACTGTAGCTTATGTAAAGCCGCCATAA  946

seq1  AACTAGCAAGGGCACTATGAAGTCTAAGAAAGCTGTGCTTTCTTGAATGC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCAAGGGCACTATGAAGTCTAAGAAAGCTGTGCTTTCTTGAATGC  996

seq1  ATCATGAACAAGAAAGACAATGAGTGAAACATGAAATCTATACAGTGGTG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAACAAGAAAGACAATGAGTGAAACATGAAATCTATACAGTGGTG  1046

seq1  TCTAAACTTTGCACACCACATCAACAATACCTCAGGAAATATCGGACTGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTTTGCACACCACATCAACAATACCTCAGGAAATATCGGACTGA  1096

seq1  ATATCTTATGATGAATTC  1110
      ||||||||||||||||||
seq2  ATATCTTATGATGAATTC  1114