BAC Information

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BAC

Clone NameB6Ng01-300B12
Chromosome7 (Build37)
Map Location 87,195,661 - 87,344,134
singlet/doubletdoublet
Overlap geneZfp710, Idh2, Sema4b
Upstream geneAcan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik
Downstream geneCib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300B12.bB6Ng01-300B12.g
ACCGA094758GA094759
length971634
definitionB6Ng01-300B12.b B6Ng01-300B12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,343,165 - 87,344,134)(87,195,661 - 87,196,294)
sequence
gaattctccaggtcgatcagtcagagatgggccggcagggaggaaagacc
tggcacccacccgccaaactccaggctctgctgtggctgactgagaatat
cataagcccagagtttatagcacggccagcagcagtgccctcagccccgt
gccgttggtggctccaaggctgactctggtcagcatcaaagacaagtaaa
tgagtaggcaggatggctggcacctgaggcccctagtgccgagtgtgctc
cctccgagcaagagcagctgcaaccgagcaagaaagcggccctctccaag
tccagatagaaaatggaagaaaagggctctcagctccctagctttccctc
ctctttcgctttgaccacaactgctttcctggtcctagtggacctcaacc
tctcctttgtcgtggccaccccaccaagcatctcgttgcccgcgctcccc
tccttctgccgcgccccatagcacttacccagcggcacactgatccgggg
gccgagcgcccgcgtagtcgtcgtccgcagcagcagcagtagcagcagca
gcagcagcgcgcgccgcaggacagcggagcggctcgcccggcccatcgcg
gcgcgtggagctcggaccgcagcaggcagcggcgtcctcctccggctcag
gttgctcaagtggaatcgcaggctggagccccgccccgcggttcggcccg
gagtccttccctcggcctccgcctctggacctgggggtgggcggcaggga
aggtggtcacgtgggccgccgcaccgtagctccctctgcccagtgctgcg
ggtgaaagccccgcgctctcgccgcagggaggagggcgcggagcagaagt
cgacgggtaggcgggcctcctagctggtccttgcccagctctttcccctt
cctccttcctgggcgctgaagtacgaggggcgctggatcgagtccacccg
acttgggggccactggggggg
gaattcactctgtagaccaggctgtactcgaactcagaaatctgcctgcc
tctgtctcccaagtgctgggattaaaggcacgctcagccttccaaggttt
tattatgaaaaattttcaaatgttttgaaaagttgtaatacttttactgt
aaacatccgtacatcgtggccccataggacagatgctagtggttcgtcac
gctaactccatctgtccatgcaagttctgaagttcactgcagcctctctt
gaggacttcattgaaccccgagatatcctggatgtggccctggttgctgt
tgcaccatgactccgggcagccacacatacctttttaatacttgaggagg
tatgtgggagtcagtcatgaccgtagaagtgaagaaaagaaagagctggg
ttgtagctcagtggtccactttgctgcctggcttgtgtggggaataaaaa
gtgtatgccatcctatgtcaggtcccgagctcagaatgctgcagctttaa
cctatgaagggggctgtcttagttttctttcttgtcacagtgataaaata
ctttgacaaaagcaatgtaagggagagtttggctcgcaattataatttat
agtccatgttggggatggcagcgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_87343165_87344134
seq2: B6Ng01-300B12.b_47_1017 (reverse)

seq1  CCCCCCCAGTG--CCCCAAGTCGGGT-GACTCGATCCAGCGCCCCTCGTA  47
      |||||||||||  ||||||||||||| |||||||||||||||||||||||
seq2  CCCCCCCAGTGGCCCCCAAGTCGGGTGGACTCGATCCAGCGCCCCTCGTA  50

seq1  CTTCAGCGCCCAGGAAGGAGGAAGGGGAAAGAGCTGGGCAAGGACCAGCT  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCGCCCAGGAAGGAGGAAGGGGAAAGAGCTGGGCAAGGACCAGCT  100

seq1  AGGAGGCCCGCCTACCCGTCGACTTCCTGCTCCGCGCCCTCCTCCCTGCG  147
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGGAGGCCCGCCTACCCGTCGACTT-CTGCTCCGCGCCCTCCTCCCTGCG  149

seq1  GCGAGAGCGCGGGGCTTTCACCCGCAGCACTGGGCAGAGGGAGCCTACGG  197
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCGAGAGCGCGGGGCTTTCACCCGCAGCACTGGGCAGAGGGAG-CTACGG  198

seq1  TGCGGCGGCCCACGTGACCACCTTCCCTGCCGCCCACCCCCAGGTCCAGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGCGGCCCACGTGACCACCTTCCCTGCCGCCCACCCCCAGGTCCAGA  248

seq1  GGCGGAGGCCGAGGGAAGGACTCCGGGCCGAACCGCGGGGCGGGGCTCCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGAGGCCGAGGGAAGGACTCCGGGCCGAACCGCGGGGCGGGGCTCCA  298

seq1  GCCTGCGATTCCACTTGAGCAACCTGAGCCGGAGGAGGACGCCGCTGCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCGATTCCACTTGAGCAACCTGAGCCGGAGGAGGACGCCGCTGCCT  348

seq1  GCTGCGGTCCGAGCTCCACGCGCCGCGATGGGCCGGGCGAGCCGCTCCGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCGGTCCGAGCTCCACGCGCCGCGATGGGCCGGGCGAGCCGCTCCGC  398

seq1  TGTCCTGCGGCGCGCGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGCGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGCGGCGCGCGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGCGGA  448

seq1  CGACGACTACGCGGGCGCTCGGCCCCCGGATCAGTGTGCCGCTGGGTAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACGACTACGCGGGCGCTCGGCCCCCGGATCAGTGTGCCGCTGGGTAAG  498

seq1  TGCTATGGGGCGCGGCAGAAGGAGGGGAGCGCGGGCAACGAGATGCTTGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGGGGCGCGGCAGAAGGAGGGGAGCGCGGGCAACGAGATGCTTGG  548

seq1  TGGGGTGGCCACGACAAAGGAGAGGTTGAGGTCCACTAGGACCAGGAAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGGCCACGACAAAGGAGAGGTTGAGGTCCACTAGGACCAGGAAAG  598

seq1  CAGTTGTGGTCAAAGCGAAAGAGGAGGGAAAGCTAGGGAGCTGAGAGCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTGGTCAAAGCGAAAGAGGAGGGAAAGCTAGGGAGCTGAGAGCCC  648

seq1  TTTTCTTCCATTTTCTATCTGGACTTGGAGAGGGCCGCTTTCTTGCTCGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCCATTTTCTATCTGGACTTGGAGAGGGCCGCTTTCTTGCTCGG  698

seq1  TTGCAGCTGCTCTTGCTCGGAGGGAGCACACTCGGCACTAGGGGCCTCAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCTGCTCTTGCTCGGAGGGAGCACACTCGGCACTAGGGGCCTCAG  748

seq1  GTGCCAGCCATCCTGCCTACTCATTTACTTGTCTTTGATGCTGACCAGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGCCATCCTGCCTACTCATTTACTTGTCTTTGATGCTGACCAGAG  798

seq1  TCAGCCTTGGAGCCACCAACGGCACGGGGCTGAGGGCACTGCTGCTGGCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTTGGAGCCACCAACGGCACGGGGCTGAGGGCACTGCTGCTGGCC  848

seq1  GTGCTATAAACTCTGGGCTTATGATATTCTCAGTCAGCCACAGCAGAGCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATAAACTCTGGGCTTATGATATTCTCAGTCAGCCACAGCAGAGCC  898

seq1  TGGAGTTTGGCGGGTGGGTGCCAGGTCTTTCCTCCCTGCCGGCCCATCTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTTGGCGGGTGGGTGCCAGGTCTTTCCTCCCTGCCGGCCCATCTC  948

seq1  TGACTGATCGACCTGGAGAATTC  970
      |||||||||||||||||||||||
seq2  TGACTGATCGACCTGGAGAATTC  971

seq1: chr7_87195661_87196294
seq2: B6Ng01-300B12.g_68_701

seq1  GAATTCACTCTGTAGACCAGGCTGTACTCGAACTCAGAAATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGTACTCGAACTCAGAAATCTGCCTGCC  50

seq1  TCTGTCTCCCAAGTGCTGGGATTAAAGGCACGCTCAGCCTTCCAAGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCCCAAGTGCTGGGATTAAAGGCACGCTCAGCCTTCCAAGGTTT  100

seq1  TATTATGAAAAATTTTCAAATGTTTTGAAAAGTTGTAATACTTTTACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGAAAAATTTTCAAATGTTTTGAAAAGTTGTAATACTTTTACTGT  150

seq1  AAACATCCGTACATCGTGGCCCCATAGGACAGATGCTAGTGGTTCGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCCGTACATCGTGGCCCCATAGGACAGATGCTAGTGGTTCGTCAC  200

seq1  GCTAACTCCATCTGTCCATGCAAGTTCTGAAGTTCACTGCAGCCTCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTCCATCTGTCCATGCAAGTTCTGAAGTTCACTGCAGCCTCTCTT  250

seq1  GAGGACTTCATTGAACCCCGAGATATCCTGGATGTGGCCCTGGTTGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTTCATTGAACCCCGAGATATCCTGGATGTGGCCCTGGTTGCTGT  300

seq1  TGCACCATGACTCCGGGCAGCCACACATACCTTTTTAATACTTGAGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCATGACTCCGGGCAGCCACACATACCTTTTTAATACTTGAGGAGG  350

seq1  TATGTGGGAGTCAGTCATGACCGTAGAAGTGAAGAAAAGAAAGAGCTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGGAGTCAGTCATGACCGTAGAAGTGAAGAAAAGAAAGAGCTGGG  400

seq1  TTGTAGCTCAGTGGTCCACTTTGCTGCCTGGCTTGTGTGGGGAATAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCTCAGTGGTCCACTTTGCTGCCTGGCTTGTGTGGGGAATAAAAA  450

seq1  GTGTATGCCATCCTATGTCAGGTCCCGAGCTCAGAATGCTGCAGCTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGCCATCCTATGTCAGGTCCCGAGCTCAGAATGCTGCAGCTTTAA  500

seq1  CCTATGAAGGGGGCTGTCTTAGTTTTCTTTCTTGTCACAGTGATAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGAAGGGGGCTGTCTTAGTTTTCTTTCTTGTCACAGTGATAAAATA  550

seq1  CTTTGACAAAAGCAATGTAAGGGAGAGTTTGGCTCGCAATTATAATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACAAAAGCAATGTAAGGGAGAGTTTGGCTCGCAATTATAATTTAT  600

seq1  AGTCCATGTTGGGGATGGCAGCGGGGGGGGGGGG  634
      ||||||||||||||||||||||||||||||||||
seq2  AGTCCATGTTGGGGATGGCAGCGGGGGGGGGGGG  634