BAC Information

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BAC

Clone NameB6Ng01-300L24
Chromosome7 (Build37)
Map Location 25,046,740 - 25,206,554
singlet/doubletdoublet
Overlap geneZfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik
Upstream geneEG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109
Downstream geneIrgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300L24.bB6Ng01-300L24.g
ACCGA095246GA095247
length1,024928
definitionB6Ng01-300L24.b B6Ng01-300L24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,205,543 - 25,206,554)(25,046,740 - 25,047,382)
sequence
gaattcataatgatccccctgcctcagtctcttgagtgctgagactatag
atatgaactaccatgccataaatttcttccaggaaaaacccctgtatcaa
gcccaagaggccagtgggttagtcacacacaagtgtcccctgctggcctg
gcagaagtgctgcagactagaaggccagagagctgggtgttactgacgtc
cccccaccacagtgccctctaggttgcactaagcgggctcctcaaatgca
cccactccaaagaacccttaccaattcttctcagtgaggatcgtgtgtga
cagctgtggccgagccatagacatcacctggctgcggagcttgctgacca
aggactggaagctggggtgacctcggtacccaggcaggagggaaaagagg
gggctggagccaggtcctggaacagtggggtgggtatttcagagttttgc
ttcagaccagcttttcccaaacctctccagtgctgaaacacacagccctg
agaaaggccccagcaccagtggcaagccagagttctcccagccccagggc
aggttgcctccccatggcccagatgtcccctagggtaactctacctgctc
gaggtgggttctcgttctcagcttcactgtccatgaagggcaccaggaac
aagttgacctcagcatccaggaagtcgggcggcagccctgggaagacgtt
gcactgtagcatggacagcgtccctggaaagcagacacttcagctgcagc
ctgagctgtgggctggggtgggggactggcagccaggaaggctcatctgg
gggtcctgcctgggagtggcatacaatctatgagaagctcagagatgctc
acccttgtagcgcaggtgggagtgtgccatgagctggtcaatcatcaggt
gcatctgacgtagcttccggggaacagaagtcctcctcttacgtgccttg
ttctgcaagaagactggggtggggaagggtacagcagtggaaggcagaac
agtcgcctgggcctctaccacggg
gaattcacactggggagaagccattcaagtgtgaggagtgtgggaaggaa
ttcagatggaactcggggcttagttctcaccagagggtccacacagcaga
gaaaccctacatgtgtcagcagtgtgggaagggcttcagtcaggcctcac
acttccacacacatttgaaaatgcacaccacagagaggatctagatctgc
agcatctgcagtaagggcttcagtcagagaccacatctatcattagaggg
cccacagtgcagggaaaccctaggtttgttctgcactcaggtggactcca
cgctgctggttgttaccagtgtcaccaaacccagaagcttcaggagagat
ggtattttggtattttgctctcaactcattctcctactgagctcattatg
aaaaaggaagatagtattttagactggaccttcttagcatacacacaaac
aaacaaaaaacgagagacttatataatagaaaaggattctgatttaatta
taaaaggaagacttgtcaattgtcaggaatcaaaccaacagaaaatcatt
gtgactcctactaatgctgagattgtttcactgtgggtaaccaattggca
aaaagcttatagcaactatatggaagaaattgccaataaacatcctaaaa
gcacgggacttcagtttatacaaaggactaattcgattccccaccatata
ataaaaagaacactgattcctgaaatgctaacattttatactgatgcaaa
tacaatgggaatggctggttataactcagaaaattgtagcagattcccca
cccccaattaatttaaatattaatacaacaagaaacctgtaagtgggcag
tggaaaaggacggagggtggagatgggagagagagaatccacagcaagag
aacccaattggtcacttgcatgtggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25205543_25206554
seq2: B6Ng01-300L24.b_48_1071 (reverse)

seq1  CCCGTGGT-GAGG-CCAGGCG-CTG-TCTGCCT--CACTGCTGTACCCT-  43
      |||||||| |||| ||||||| ||| |||||||  |||||||||||||| 
seq2  CCCGTGGTAGAGGCCCAGGCGACTGTTCTGCCTTCCACTGCTGTACCCTT  50

seq1  -CCCA-CCCAGTCTTCTTGCAGAACAAGGCACGTA--GGGAGGACTTCTG  89
       |||| |||||||||||||||||||||||||||||   ||||||||||||
seq2  CCCCACCCCAGTCTTCTTGCAGAACAAGGCACGTAAGAGGAGGACTTCTG  100

seq1  -TCCCCGGAAGCTACGTCAGATGCACCTGATGATTGACCAGCTCATGGCA  138
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCGGAAGCTACGTCAGATGCACCTGATGATTGACCAGCTCATGGCA  150

seq1  CACTCCCACCTGCGCTACAAGGGTGAGCATCTCTGAGCTTCTCATAGATT  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCACCTGCGCTACAAGGGTGAGCATCTCTGAGCTTCTCATAGATT  200

seq1  GTATGCCACTCCCAGGCAGGACCCCCAGATGAGCCTTCCTGGCTGCCAGT  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCCACTCCCAGGCAGGACCCCCAGATGAGCCTTCCTGGCTGCCAGT  250

seq1  CCCCCACCCCAGCCCACAGCTCAGGCTGCAGCTGAAGTGTCTGCTTTCCA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCCAGCCCACAGCTCAGGCTGCAGCTGAAGTGTCTGCTTTCCA  300

seq1  GGGACGCTGTCCATGCTACAGTGCAACGTCTTCCCAGGGCTGCCGCCCGA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACGCTGTCCATGCTACAGTGCAACGTCTTCCCAGGGCTGCCGCCCGA  350

seq1  CTTCCTGGATGCTGAGGTCAACTTGTTCCTGGTGCCCTTCATGGACAGTG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGATGCTGAGGTCAACTTGTTCCTGGTGCCCTTCATGGACAGTG  400

seq1  AAGCTGAGAACGAGAACCCACCTCGAGCAGGTAGAGTTACCCTAGGGGAC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGAACGAGAACCCACCTCGAGCAGGTAGAGTTACCCTAGGGGAC  450

seq1  ATCTGGGCCATGGGGAGGCAACCTGCCCTGGGGCTGGGAGAACTCTGGCT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGCCATGGGGAGGCAACCTGCCCTGGGGCTGGGAGAACTCTGGCT  500

seq1  TGCCACTGGTGCTGGGGCCTTTCTCAGGGCTGTGTGTTTCAGCACTGGAG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTGGTGCTGGGGCCTTTCTCAGGGCTGTGTGTTTCAGCACTGGAG  550

seq1  AGGTTTGGGAAAAGCTGGTCTGAAGCAAAACTCTGAAATACCCACCCCAC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGGGAAAAGCTGGTCTGAAGCAAAACTCTGAAATACCCACCCCAC  600

seq1  TGTTCCAGGACCTGGCTCCAGCCCCCTCTTTTCCCTCCTGCCTGGGTACC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAGGACCTGGCTCCAGCCCCCTCTTTTCCCTCCTGCCTGGGTACC  650

seq1  GAGGTCACCCCAGCTTCCAGTCCTTGGTCAGCAAGCTCCGCAGCCAGGTG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCACCCCAGCTTCCAGTCCTTGGTCAGCAAGCTCCGCAGCCAGGTG  700

seq1  ATGTCTATGGCTCGGCCACAGCTGTCACACACGATCCTCACTGAGAAGAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTATGGCTCGGCCACAGCTGTCACACACGATCCTCACTGAGAAGAA  750

seq1  TTGGTAAGGGTTCTTTGGAGTGGGTGCATTTGAGGAGCCCGCTTAGTGCA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAGGGTTCTTTGGAGTGGGTGCATTTGAGGAGCCCGCTTAGTGCA  800

seq1  ACCTAGAGGGCACTGTGGTGGGGGGACGTCAGTAACACCCAGCTCTCTGG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGAGGGCACTGTGGTGGGGGGACGTCAGTAACACCCAGCTCTCTGG  850

seq1  CCTTCTAGTCTGCAGCACTTCTGCCAGGCCAGCAGGGGACACTTGTGTGT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAGTCTGCAGCACTTCTGCCAGGCCAGCAGGGGACACTTGTGTGT  900

seq1  GACTAACCCACTGGCCTCTTGGGCTTGATACAGGGGTTTTTCCTGGAAGA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACCCACTGGCCTCTTGGGCTTGATACAGGGGTTTTTCCTGGAAGA  950

seq1  AATTTATGGCATGGTAGTTCATATCTATAGTCTCAGCACTCAAGAGACTG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATGGCATGGTAGTTCATATCTATAGTCTCAGCACTCAAGAGACTG  1000

seq1  AGGCAGGGGGATCATTATGAATTC  1012
      ||||||||||||||||||||||||
seq2  AGGCAGGGGGATCATTATGAATTC  1024

seq1: chr7_25046740_25047382
seq2: B6Ng01-300L24.g_68_710

seq1  GAATTCACACTGGGGAGAAGCCATTCAAGTGTGAGGAGTGTGGGAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTGGGGAGAAGCCATTCAAGTGTGAGGAGTGTGGGAAGGAA  50

seq1  TTCAGATGGAACTCGGGGCTTAGTTCTCACCAGAGGGTCCACACAGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATGGAACTCGGGGCTTAGTTCTCACCAGAGGGTCCACACAGCAGA  100

seq1  GAAACCCTACATGTGTCAGCAGTGTGGGAAGGGCTTCAGTCAGGCCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTACATGTGTCAGCAGTGTGGGAAGGGCTTCAGTCAGGCCTCAC  150

seq1  ACTTCCACACACATTTGAAAATGCACACCACAGAGAGGATCTAGATCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCACACACATTTGAAAATGCACACCACAGAGAGGATCTAGATCTGC  200

seq1  AGCATCTGCAGTAAGGGCTTCAGTCAGAGACCACATCTATCATTAGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGCAGTAAGGGCTTCAGTCAGAGACCACATCTATCATTAGAGGG  250

seq1  CCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGTGCAGGGAAACCCTAGGTTTGTTCTGCACTCAGGTGGACTCCA  300

seq1  CGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGAAGCTTCAGGAGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGCTGGTTGTTACCAGTGTCACCAAACCCAGAAGCTTCAGGAGAGAT  350

seq1  GGTATTTTGGTATTTTGCTCTCAACTCATTCTCCTACTGAGCTCATTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTGGTATTTTGCTCTCAACTCATTCTCCTACTGAGCTCATTATG  400

seq1  AAAAAGGAAGATAGTATTTTAGACTGGACCTTCTTAGCATACACACAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAAGATAGTATTTTAGACTGGACCTTCTTAGCATACACACAAAC  450

seq1  AAACAAAAAACGAGAGACTTATATAATAGAAAAGGATTCTGATTTAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAACGAGAGACTTATATAATAGAAAAGGATTCTGATTTAATTA  500

seq1  TAAAAGGAAGACTTGTCAATTGTCAGGAATCAAACCAACAGAAAATCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGAAGACTTGTCAATTGTCAGGAATCAAACCAACAGAAAATCATT  550

seq1  GTGACTCCTACTAATGCTGAGATTGTTTCACTGTGGGTAACCAATTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCCTACTAATGCTGAGATTGTTTCACTGTGGGTAACCAATTGGCA  600

seq1  AAAAGCTTATAGCAACTATATGGAAGAAATTGCCAATAAACAT  643
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTATAGCAACTATATGGAAGAAATTGCCAATAAACAT  643