BAC Information

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BAC

Clone NameB6Ng01-302L01
Chromosome7 (Build37)
Map Location 132,579,207 - 132,710,266
singlet/doubletdoublet
Overlap geneJmjd5, Nsmce1, EG244214, Il4ra
Upstream geneEG545999, LOC670828, 4933440M02Rik, LOC100043014
Downstream geneIl21r, Gtf3c1, D430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302L01.bB6Ng01-302L01.g
ACCGA096676GA096677
length828972
definitionB6Ng01-302L01.b B6Ng01-302L01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,709,440 - 132,710,266)(132,579,207 - 132,580,159)
sequence
gaattcagatgtggtgtgtgtgtgagtatgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtaacagccagtgagtgtgggaccctcaagagctttttg
acccaagccctacatggccactgtccagacaaagtcacaatacacatgcc
agcgggtgtggtccaccatgcaggaagttttcatacagcaaacaaaattc
taacctcctgaaccctctccttcaacagctaccctgggttttcccgtcat
acagaataatccacccttgtctgggcttggggtagaatttgtgtgtccat
ttggttttttttttttttgtttttttcttttgttttgtttttttacagta
acttgtagcccaggctgggctcaaactcacaatcctcctgcctcagtctc
ccaagtgctaggctgacaggtgtaagccacacctggccacatggatgaga
aaccttcaggtcaattcccacgtgtcttcatgctgaccttctagattgat
ctagaaactctctttccagatcactgagcgaccctggccttcactcaatt
cctctgatcagactctgcaaggtcttctgactcaatgaccctgcgacacg
tcctcccaacccatgccaggcaggccctccctgggggcctcaccaaagac
acaccacagacactgtgtgccctcccctgccttcctctaagttgacacca
gtgtccctgtgcaccctgctttaaaagtgcaatgctctctccctctccac
ccctcccccaagcctcccttactcagccctgagctgcgtttttcccacca
tccttgataacctttggcatataactca
gaattcacttcacatcacctgctcactgaatacacagcgaaaggatgtct
agtaatcgtcagatatctcagtaaccagatggaaggaacggtatgggcct
atttttctttctttttaaaatttcttttttttacatgtttgggtgttttt
gcctcatgtgtgtctgtggaccacatgcatatagtgaccatagaggccag
aggaagatataagatcatctgggactggagatggcttgtaagctgtccag
tgattgatgggaatcaaaccaaggtctccttgaagatcagcgagtgctct
tatccaccgagccatctatcaacctccagggctgtttttcaggtaggaga
tttaggttaggaaaggccaagtcctctgttgtaaagcaaatgttgataat
gactacttactgagcacttgctgtgtaccaagcgaagtgctggatgcttc
ccgctcaggaggttccttgcctactgggtacaatagccttggcttgcaga
taaggaaacagaagcttggagggatggatatactggttcaggagaggaag
gataagaaaaagggggaatagaagagagcagaggagcgagaaaaggccaa
gaatgtcaagttcacccacattcacacatatccacacacatacgtacaca
ttcacaggcttacgcgcgtacattcagggaaggttaaactcattacatca
gagtaaaacatatgggcacccaaattctcatttatgacacctaattggaa
gggatgcactcaggacaaggactgttttagcacattccaatgtgcagacc
actgtgacaagaccccagttactggctgtgcttagatagtttttgtgtca
acttgacacaagcgaaagtcatcagtgaaggagggatctttcaactgaga
agatgcccttcacaagataaagctgggggcaagtccattagggcattttc
ttaattggtggatttaattggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_132709440_132710266
seq2: B6Ng01-302L01.b_47_874 (reverse)

seq1  TGAGTTATATGCCAAAGGTTATCAAAAGATGGTGGG-AAAACGCAGCTCA  49
      ||||||||||||||||||||||| || ||||||||| |||||||||||||
seq2  TGAGTTATATGCCAAAGGTTATC-AAGGATGGTGGGAAAAACGCAGCTCA  49

seq1  GGACTGAGTAAGGGAGGCTTGGGGGAGGGGTGGAGAGGGAGAGGGCATTG  99
      || |||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGGCTGAGTAAGGGAGGCTTGGGGGAGGGGTGGAGAGGGAGAGAGCATTG  99

seq1  CAC-TTTAAAGCAGGGTGCACAGGGACACTGGTGTCAACTTAGAGGAAGG  148
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTAAAGCAGGGTGCACAGGGACACTGGTGTCAACTTAGAGGAAGG  149

seq1  CAGGGGAGGGCACACAGTGTCTGTGGTGTGTCTTTGGTGAGGCCCCCAGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAGGGCACACAGTGTCTGTGGTGTGTCTTTGGTGAGGCCCCCAGG  199

seq1  GAGGGCCTGCCTGGCATGGGTTGGGAGGACGTGTCGCAGGGTCATTGAGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCTGCCTGGCATGGGTTGGGAGGACGTGTCGCAGGGTCATTGAGT  249

seq1  CAGAAGACCTTGCAGAGTCTGATCAGAGGAATTGAGTGAAGGCCAGGGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACCTTGCAGAGTCTGATCAGAGGAATTGAGTGAAGGCCAGGGTC  299

seq1  GCTCAGTGATCTGGAAAGAGAGTTTCTAGATCAATCTAGAAGGTCAGCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTGATCTGGAAAGAGAGTTTCTAGATCAATCTAGAAGGTCAGCAT  349

seq1  GAAGACACGTGGGAATTGACCTGAAGGTTTCTCATCCATGTGGCCAGGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACACGTGGGAATTGACCTGAAGGTTTCTCATCCATGTGGCCAGGTG  399

seq1  TGGCTTACACCTGTCAGCCTAGCACTTGGGAGACTGAGGCAGGAGGATTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTACACCTGTCAGCCTAGCACTTGGGAGACTGAGGCAGGAGGATTG  449

seq1  TGAGTTTGAGCCCAGCCTGGGCTACAAGTTACTGTAAAAAAACAAAACAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGAGCCCAGCCTGGGCTACAAGTTACTGTAAAAAAACAAAACAA  499

seq1  AAGAAAAAAACAAAAAAAAAAAAAACCAAATGGACACACAAATTCTACCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAACAAAAAAAAAAAAAACCAAATGGACACACAAATTCTACCC  549

seq1  CAAGCCCAGACAAGGGTGGATTATTCTGTATGACGGGAAAACCCAGGGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCAGACAAGGGTGGATTATTCTGTATGACGGGAAAACCCAGGGTA  599

seq1  GCTGTTGAAGGAGAGGGTTCAGGAGGTTAGAATTTTGTTTGCTGTATGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGAAGGAGAGGGTTCAGGAGGTTAGAATTTTGTTTGCTGTATGAA  649

seq1  AACTTCCTGCATGGTGGACCACACCCGCTGGCATGTGTATTGTGACTTTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTGCATGGTGGACCACACCCGCTGGCATGTGTATTGTGACTTTG  699

seq1  TCTGGACAGTGGCCATGTAGGGCTTGGGTCAAAAAGCTCTTGAGGGTCCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACAGTGGCCATGTAGGGCTTGGGTCAAAAAGCTCTTGAGGGTCCC  749

seq1  ACACTCACTGGCTGTTACACACACACACACACACACACACACACACACAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCACTGGCTGTTACACACACACACACACACACACACACACACACAC  799

seq1  ATACTCACACACACACCACATCTGAATTC  827
      |||||||||||||||||||||||||||||
seq2  ATACTCACACACACACCACATCTGAATTC  828

seq1: chr7_132579207_132580159
seq2: B6Ng01-302L01.g_68_1027

seq1  GAATTCACTTCACATCACCTGCTCACTGAATACACAGCGAAAGGATGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCACATCACCTGCTCACTGAATACACAGCGAAAGGATGTCT  50

seq1  AGTAATCGTCAGATATCTCAGTAACCAGATGGAAGGAACGGTATGGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATCGTCAGATATCTCAGTAACCAGATGGAAGGAACGGTATGGGCCT  100

seq1  ATTTTTCTTTCTTTTTAAAATTTCTTTTTTTTACATGTTTGGGTGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTTCTTTTTAAAATTTCTTTTTTTTACATGTTTGGGTGTTTTT  150

seq1  GCCTCATGTGTGTCTGTGGACCACATGCATATAGTGACCATAGAGGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATGTGTGTCTGTGGACCACATGCATATAGTGACCATAGAGGCCAG  200

seq1  AGGAAGATATAAGATCATCTGGGACTGGAGATGGCTTGTAAGCTGTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATATAAGATCATCTGGGACTGGAGATGGCTTGTAAGCTGTCCAG  250

seq1  TGATTGATGGGAATCAAACCAAGGTCTCCTTGAAGATCAGCGAGTGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATGGGAATCAAACCAAGGTCTCCTTGAAGATCAGCGAGTGCTCT  300

seq1  TATCCACCGAGCCATCTATCAACCTCCAGGGCTGTTTTTCAGGTAGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACCGAGCCATCTATCAACCTCCAGGGCTGTTTTTCAGGTAGGAGA  350

seq1  TTTAGGTTAGGAAAGGCCAAGTCCTCTGTTGTAAAGCAAATGTTGATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTTAGGAAAGGCCAAGTCCTCTGTTGTAAAGCAAATGTTGATAAT  400

seq1  GACTACTTACTGAGCACTTGCTGTGTACCAAGCGAAGTGCTGGATGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACTTACTGAGCACTTGCTGTGTACCAAGCGAAGTGCTGGATGCTTC  450

seq1  CCGCTCAGGAGGTTCCTTGCCTACTGGGTACAATAGCCTTGGCTTGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCAGGAGGTTCCTTGCCTACTGGGTACAATAGCCTTGGCTTGCAGA  500

seq1  TAAGGAAACAGAAGCTTGGAGGGATGGATATACTGGTTCAGGAGAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAACAGAAGCTTGGAGGGATGGATATACTGGTTCAGGAGAGGAAG  550

seq1  GATAAGAAAAAGGGGGAATAGAAGAGAGCAGAGGAGCGAGAAAAGGCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGAAAAAGGGGGAATAGAAGAGAGCAGAGGAGCGAGAAAAGGCCAA  600

seq1  GAATGTCAAGTTCACCCACATTCACACATATCCACACACATACGTACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCAAGTTCACCCACATTCACACATATCCACACACATACGTACACA  650

seq1  TTCACAGGCTTACGCGCGTACATTCAGGGAAGGTTAAACTCATTACATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGCTTACGCGCGTACATTCAGGGAAGGTTAAACTCATTACATCA  700

seq1  GAGTAAAACATATGGGCACCCAAATTCTCATTTATGACACCTAATTGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAACATATGGGCACCCAAATTCTCATTTATGACACCTAATTGGAA  750

seq1  GGGATGCACTCAGGACAAGGACTGTTTTAGCACATTCCAATGTGCAGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCACTCAGGACAAGGACTGTTTTAGCACATTCCAATGTGCAGACC  800

seq1  ACTGTGACAAGA-CCCAGTTACTGGCTGTGC-TAGATAG-TTTTGTGTCA  847
      |||||||||||| |||||||||||||||||| ||||||| ||||||||||
seq2  ACTGTGACAAGACCCCAGTTACTGGCTGTGCTTAGATAGTTTTTGTGTCA  850

seq1  ACTTGACACAAGCGAAAGTCATCAGTG-AGGAGGGATC-TTCAACTGAGA  895
      ||||||||||||||||||||||||||| |||||||||| |||||||||||
seq2  ACTTGACACAAGCGAAAGTCATCAGTGAAGGAGGGATCTTTCAACTGAGA  900

seq1  AGATG-CCTTCACAAGATAAAGCTGGGGGCAAGCCCA-TAGGGCATTTTC  943
      ||||| ||||||||||||||||||||||||||| ||| ||||||||||||
seq2  AGATGCCCTTCACAAGATAAAGCTGGGGGCAAGTCCATTAGGGCATTTTC  950

seq1  TTAATTGGTG  953
      ||||||||||
seq2  TTAATTGGTG  960