BAC Information

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BAC

Clone NameB6Ng01-308F04
Chromosome7 (Build37)
Map Location 124,828,516 - 124,829,539
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546993, LOC100043330, Xylt1
Downstream geneLOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308F04.g
ACCGA100855
length1,021
definitionB6Ng01-308F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcatttccaagagggtttagtgggaagtatccactgcttttat
cccccctaaatgattatgggttaccctttgtggctatgacaccctctaca
gtccgaccagagttcaaaccacccagctttgccctgcattccatgtgaac
ggtggttctctggggtacctgagactccccgaagcctagagatgtatgtt
gaatgagctactcttctcacacgtgataaaaagagttcctgaaggtgaga
tttttatttctgattttgagaagttccccagtccctttctgttttctaac
acccaactgtttctctctaggagacacccccgtctgaaaaagatctgcta
atggaaagcccaatcctgtttcatgtctcaagaaatggggtgcattcatt
tctctaaggaggggcttctgatagactggacattactccctggagacgat
tttgctcttcgcggggcatttgacaatgtgtagcaaagtgtttggttatt
acaggatgacagtgcttccggacactaatcagtacaacctggctatactg
ggtgctgatctgtagcatacaatcacgggggcagttctttctccctcagg
cacacacactcgaagaccacagactggcacacacacactcacacactcac
acccactgacactattacctgcctttgattgacaggcacgttgatgttaa
gagattgtgctgtgagccttgtcttttctcacccgtgccctggtttctgt
gatgtttgaggaaggagcctgccattatggccctcacaagatatcactga
tgatcctaaacctttatgtgtgtggagatgagtctctgactgagtcgcgg
acgtactccaggaatcgagcacactgcctgaatgaatagagcctgccctc
aattaatgcacagaccacagcaactgcagacatatgtccactccagtctg
ctgagagagaacatcatgatcgcgctagagtcaccttcctcacagagacc
ctcatgatgctctctctccac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124828516_124829539
seq2: B6Ng01-308F04.g_66_1086

seq1  GAATTCCTCATTTCAAAGACACATTTAGTGGGAAGTATCCACTGCTATTA  50
      |||||||||||||| ||||    ||||||||||||||||||||||| |||
seq2  GAATTCCTCATTTCCAAGA-GGGTTTAGTGGGAAGTATCCACTGCTTTTA  49

seq1  TCCCCCCTAAAGGATTATGGGTTACACTTTGTGGCTATGACACCATCAAG  100
      ||||||||||| ||||||||||||| |||||||||||||||||| || | 
seq2  TCCCCCCTAAATGATTATGGGTTACCCTTTGTGGCTATGACACCCTCTAC  99

seq1  AGTCAGAGCAGAATTCAAACCACCCAGCTTTGCCCTGCATTCCATGTGAA  150
      |||| || |||| |||||||||||||||||||||||||||||||||||||
seq2  AGTCCGACCAGAGTTCAAACCACCCAGCTTTGCCCTGCATTCCATGTGAA  149

seq1  CGGTGGTTCTCTGTCATAACTGAGACTCCAGGAAGCCTTGAGATGTTTGT  200
      |||||||||||||   || ||||||||||  ||||||| ||||||| |||
seq2  CGGTGGTTCTCTGGGGTACCTGAGACTCCCCGAAGCCTAGAGATGTATGT  199

seq1  TGAATGAGCTACAGTTCTCAGACATGATAAAAAGAGTTCCTGAAGGTGAG  250
      ||||||||||||  |||||| || ||||||||||||||||||||||||||
seq2  TGAATGAGCTACTCTTCTCACACGTGATAAAAAGAGTTCCTGAAGGTGAG  249

seq1  ATTTTTATTTCTGATTTTGAGAAGTTCCCAAGTCCCTTTCTGTTTTCTAA  300
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATTTTTATTTCTGATTTTGAGAAGTTCCCCAGTCCCTTTCTGTTTTCTAA  299

seq1  CACAAAACTGTATCTCTCTAGGAGACACACACGTCTGAAAAAAATCTGCT  350
      |||  |||||| |||||||||||||||| | ||||||||||| |||||||
seq2  CACCCAACTGTTTCTCTCTAGGAGACACCCCCGTCTGAAAAAGATCTGCT  349

seq1  CAGGGAAAGCCCAATCCTGTTTCATGTCTCAAGAAATGGGGTGCATTCAT  400
       | |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAGCCCAATCCTGTTTCATGTCTCAAGAAATGGGGTGCATTCAT  399

seq1  TTCTCTAAGGAGGGGCTTCTGATAGACTGGAGATTACTAGCTGGAGACAA  450
      ||||||||||||||||||||||||||||||| ||||||  |||||||| |
seq2  TTCTCTAAGGAGGGGCTTCTGATAGACTGGACATTACTCCCTGGAGACGA  449

seq1  TTTTGCTCTTCAAGGGGCATTTGACAATGTCTAGTAAAGTGTTTGGTTAT  500
      |||||||||||  ||||||||||||||||| ||| |||||||||||||||
seq2  TTTTGCTCTTCGCGGGGCATTTGACAATGTGTAGCAAAGTGTTTGGTTAT  499

seq1  TACAGGATGAGAGTGCTTCAGGACACTAGTCAGTAGAAGCTGGTAGTACT  550
      |||||||||| |||||||| |||||||| |||||| || ||||   ||||
seq2  TACAGGATGACAGTGCTTCCGGACACTAATCAGTACAACCTGGCTATACT  549

seq1  GGGTGCTGATCTGTAGCATACAATCAC-GGGGCAGTTCTTTCTCCCTCAG  599
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGGTGCTGATCTGTAGCATACAATCACGGGGGCAGTTCTTTCTCCCTCAG  599

seq1  GCACACACACTCAAAGACCACACACACACACACACACACACACACACACA  649
      |||||||||||| ||||||||| ||   ||||||||||| ||||||| ||
seq2  GCACACACACTCGAAGACCACAGACTGGCACACACACACTCACACACTCA  649

seq1  CACACACACACACGATTACATAGCTTTGAATGACAGGGACATTGATGTTA  699
      ||| |||  |||| ||||| |  |||||| ||||||| || |||||||||
seq2  CACCCACTGACACTATTACCTGCCTTTGATTGACAGGCACGTTGATGTTA  699

seq1  AGAAACTGTTCTGTGAGCCTTGCCTTTTCTCGCCTTTGAAGTGGTATTTG  749
      ||| | ||| |||||||||||| |||||||| ||  ||   |||| | ||
seq2  AGAGATTGTGCTGTGAGCCTTGTCTTTTCTCACCCGTGCCCTGGTTTCTG  749

seq1  TTATGTTGGATGAAGGACCCTGTTATTCTTGTCCTCAGAAAATATAAGTG  799
      | ||||| || |||||| ||||  ||| | | ||||| || |||| | ||
seq2  TGATGTTTGAGGAAGGAGCCTGCCATTATGGCCCTCACAAGATATCACTG  799

seq1  AAGAACAGAGAGCTATATGTTTGGACTGATGTGTCAGTGACTGAGCCGCT  849
      | || |  | | || ||||| ||    |||| |||  |||||||| ||| 
seq2  ATGATCCTAAACCTTTATGTGTGTGGAGATGAGTCTCTGACTGAGTCGCG  849

seq1  GAGTTACTAAAGGAAGTGAGCACAAATGTATGAATGAATAATGACATCAG  899
      ||  ||||  |||||  |||||| | ||  ||||||||||  | |  |  
seq2  GACGTACTCCAGGAATCGAGCAC-ACTGCCTGAATGAATAGAGCCTGCCC  898

seq1  CAAATTAATGAAGAAAAGAGAGCTAAGGCATACTTAATGTGCACTTGTTA  949
        |||||||| | | |  | ||| |  ||| || | |||| ||||     
seq2  TCAATTAATGCACAGACCACAGCAACTGCAGACAT-ATGTCCACTCCAGT  947

seq1  AGGTTGTGAGTAGAGC-TTATGATTGTGCTAAGTGTCACATTCC-CAAAG  997
        | || ||| ||| | | ||||| | ||| || ||||| |||| || ||
seq2  CTGCTGAGAG-AGAACATCATGATCGCGCT-AGAGTCACCTTCCTCACAG  995

seq1  AGATCCTTCATGATGCTCTCACTCCAC  1024
      ||| || ||||||||||||| ||||||
seq2  AGA-CCCTCATGATGCTCTCTCTCCAC  1021