BAC Information

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BAC

Clone NameB6Ng01-310B01
Chromosome7 (Build37)7 (Build37)
Map Location 15,251,698 - 15,252,71316,295,116 - 16,296,188
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588
Downstream geneLOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310B01.bB6Ng01-310B01.g
ACCGA102148GA102149
length1,0281,097
definitionB6Ng01-310B01.b B6Ng01-310B01.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(15,251,698 - 15,252,713)(16,295,116 - 16,296,188)
sequence
gaattcatgcaatatagggactcgctatcaagtgtaactccaattatatg
attacctatgctctcttcttgcttcagaggtcactacatgcaacagaaac
cctcatatacatgcagaacttgcaatcatatgatagaaaagcaatacatc
tgataaataaatactgtgagtcaactccccacagaactatatctcatttc
ttatgtacaaaatagttttgtttattttgagcactaatagctattatatg
tgaatagaggtaagaggaaaattggcagggattattattctctttcatcc
ttgttagtttcaaggctggaacacaaggtcaggcattgtaggaacatgat
tgtccacaagagccgagccacctacagggcccttcttcactgctgctttt
tactttgataatgggtctcactgacctgccaagcctgcctggatttgcct
tctggcttcctcagcctggagtggctggccttccagatctgaacaccaac
ctgctatttgaggaataaccccattatttcttttttaaaaattttcttcc
ttttccctttatttatatatttatttacactccagctttattccccccag
ccaccatccaccctctgactgtttcacatcccatagctcctccccacccc
acagtctccacaatgatgtccccaccactcaccctggatccatccagacc
tctaaactccctgggacctccagtctcttgaggattatgttcaccttctc
tgaacctagactcagcagtaacctctgctgcatatgtgttgggagcttca
tataagctggtgtaaccctgcctgattggtggtccagtgcttgagagatc
ttggaggtccaggttaattgagattgctggtcctcctacaggttctcact
tctcagtttcttccagcttttccctaattcaaccacaggggtcagcagct
tctgtccattggttgggtgcaaatatctgtatctgactctttcagttgct
tgttgggtcttttggagggcagtcatga
gaattccaagtttgcagagatatataagggcaggtcttctgagtagaatt
aaaacagacagaggatttagaaagttacagtaacactctggattcctggt
gagtgggtgggctacatgaaatatttaaggttgctgtgtgaaggggatgt
catggtggagccttggtaactttttgtagtttgtatgggtttttgattgg
tgaagtctaaaatgtgctctgtgcataggcagaagactgggtgtagccac
aaggtgtgaatgtctcctggctgtgagaggatgaaaggtagagcctgtgc
tagggtccttttagggagattcatttaaggctatttgactttcttgaaat
tcaataacagggggcatctgggttatgtgtaagagtcttttgatatccag
gttaattatatcaccaatgctcttggatggatgagtgtggaatgagatct
attggacttacctgttccatggacctttattagttgttttgagacagatt
gtccagtagaaaggaggagaatctagcaccctctctccttttttttacat
tcatgataatattccttttttaaaaaataaattttatttaatcattttta
cctagattttaggctatattttatcccccttctggtccacacactgactg
ttctttatcacatacctcttctttccttctccaaaaaaatgtcccctacc
ccacccccttccctacaaaactttctcactccctacgtcctcctgtctct
tgagctttatgcgtatcttcactgactgtgtccagacccacagtgtcctg
ttgaaatatgtgttgttggcctcatatcatctggtgtatgctgccttgtt
ggtggcccagttttttgagggatctttggggtttcaggttaagttgaaga
ctgctgtgtctttactacaaggtttgccctcctcctcagcttcttctagg
ctttcactaatttcaaacaccacgggtcagcgaacttggtcaaatctgtt
ggggtatgaaatgtcctcatctgaactttcaattggcttgcagtggtcaa
tttaagggggcaattaataaatagggcccccctttttttggagcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15251698_15252713
seq2: B6Ng01-310B01.b_54_1079

seq1  ATTCATGCAACATAGGGACCCACTATCAAGTCTAATTCAAGTTATATGAG  50
      |||||||||| |||||||| | ||||||||| ||| || | |||||||| 
seq2  ATTCATGCAATATAGGGACTCGCTATCAAGTGTAACTCCAATTATATGAT  50

seq1  TTCCTATGCCCTCTCCTTGCTTCAAAGGTCACTACATGCAACAGGAACCC  100
      | ||||||| |||| ||||||||| ||||||||||||||||||| |||||
seq2  TACCTATGCTCTCTTCTTGCTTCAGAGGTCACTACATGCAACAGAAACCC  100

seq1  TCATATACATGCAGAACATGCAATCATATAATAGAAAAACAGTAAATCTG  150
      ||||||||||||||||| ||||||||||| |||||||| || || |||||
seq2  TCATATACATGCAGAACTTGCAATCATATGATAGAAAAGCAATACATCTG  150

seq1  ----ATAAATACTGTGATCCACCTCCCCACAGAACTATATCTCGTTTCTC  196
          |||||||||||||  || ||||||||||||||||||||| ||||| 
seq2  ATAAATAAATACTGTGAGTCAACTCCCCACAGAACTATATCTCATTTCTT  200

seq1  ATGTACAAAATAATTTTGTTTATTTTCAGCACTAATAGCTATTATATGTA  246
      |||||||||||| ||||||||||||| |||||||||||||||||||||| 
seq2  ATGTACAAAATAGTTTTGTTTATTTTGAGCACTAATAGCTATTATATGTG  250

seq1  AATAAGAGGTCAGAGGATAATTGGCAGGGGTTATTTTTCTCTTTCAGCCT  296
      ||| |||||| |||||| ||||||||||| ||||| |||||||||| |||
seq2  AAT-AGAGGTAAGAGGAAAATTGGCAGGGATTATTATTCTCTTTCATCCT  299

seq1  TGTTAGTCTCAAGGCTGGAACACAAGTTCAGGGATTGTAGGAACATGCTT  346
      ||||||| |||||||||||||||||| ||||| |||||||||||||| ||
seq2  TGTTAGTTTCAAGGCTGGAACACAAGGTCAGGCATTGTAGGAACATGATT  349

seq1  GACCACAA-----GAGCCATCTATAGTTCCCTCCTGCACTGCTGGTGTTT  391
      | ||||||     |||||| ||| ||  |||| || |||||||| | |||
seq2  GTCCACAAGAGCCGAGCCACCTACAGGGCCCTTCTTCACTGCTGCTTTTT  399

seq1  ACTTTGAGACTGGGTCTCACTGACCTGCTAAGCCTGCCTCGGTTTGCCTT  441
      ||||||| | |||||||||||||||||| |||||||||| | ||||||||
seq2  ACTTTGATAATGGGTCTCACTGACCTGCCAAGCCTGCCTGGATTTGCCTT  449

seq1  CTGGTTTCCTCAGCGTGGAGTTGCTGGTCTTCCAGATCTGAACCAATACC  491
      |||| ||||||||| |||||| ||||| |||||||||||||||    |||
seq2  CTGGCTTCCTCAGCCTGGAGTGGCTGGCCTTCCAGATCTGAACACCAACC  499

seq1  TGATTTTTCTGATTTTGAGAAATAACCCCATTATTTCTTTTTTAAAGTTT  541
      || |         |||||| ||||||||||||||||||||||||||  ||
seq2  TGCT--------ATTTGAGGAATAACCCCATTATTTCTTTTTTAAAAATT  541

seq1  TTCTTCTTTTTTTCTTTCTTTATATATTTATTTA-----------TTTCC  580
      |||||| ||||  |||| ||||||||||||||||           | | |
seq2  TTCTTCCTTTTCCCTTTATTTATATATTTATTTACACTCCAGCTTTATTC  591

seq1  CTCTCAACACCCATCCACCCTCTGACTGTTTCACATCCCATAGCTCCTCC  630
      | | || |  ||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGCCACCATCCACCCTCTGACTGTTTCACATCCCATAGCTCCTCC  641

seq1  CCACCCCTCAGTCTCCACAATGATGTCCTCACCAGTCATCCTCAATCCAT  680
      ||||||| |||||||||||||||||||| ||||| ||| |||  ||||||
seq2  CCACCCCACAGTCTCCACAATGATGTCCCCACCACTCACCCTGGATCCAT  691

seq1  CCAGACCTCTAAATTCCCTGGGACCTCCAGTCTCTTGAGGATTATGTTCA  730
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCAGACCTCTAAACTCCCTGGGACCTCCAGTCTCTTGAGGATTATGTTCA  741

seq1  TCTTCTCTGACTGAACCCAGACTCAGCAGT--CCTCTGCTACATATGTGT  778
       |||||    ||||||| ||||||||||||  |||||||| |||||||||
seq2  CCTTCT----CTGAACCTAGACTCAGCAGTAACCTCTGCTGCATATGTGT  787

seq1  TGGGGGCTTCATATTAGCTGGTGT-ACACTGCCTGATTGATGGTCCAGTA  827
      |||| ||||||||| ||||||||| || ||||||||||| ||||||||| 
seq2  TGGGAGCTTCATATAAGCTGGTGTAACCCTGCCTGATTGGTGGTCCAGTG  837

seq1  CTTGAGAGATTTTGGAGGTCCAGGTTAATTGAGATTGCTGGTCCTCCTAC  877
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAGATCTTGGAGGTCCAGGTTAATTGAGATTGCTGGTCCTCCTAC  887

seq1  AGGTTCTCACTTCTCAGTTTCTTCCAGCTTTTCCCTAATTCAACCACAGG  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTCACTTCTCAGTTTCTTCCAGCTTTTCCCTAATTCAACCACAGG  937

seq1  GGTCAGCAGCTTCTCTCCATTGATTGGGTGCAAATATCTGTATCTGACTC  977
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  GGTCAGCAGCTTCTGTCCATTGGTTGGGTGCAAATATCTGTATCTGACTC  987

seq1  TTTCAGTTGCTTGTTGGGTCTTTTGGAGGGCAGACATGA  1016
      ||||||||||||||||||||||||||||||||| |||||
seq2  TTTCAGTTGCTTGTTGGGTCTTTTGGAGGGCAGTCATGA  1026

seq1: chr7_16295116_16296188
seq2: B6Ng01-310B01.g_66_1162

seq1  GAATTCCAAGTTTGCAGAGATATATAAGGGCAGGTCTTCTGAGTAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTTTGCAGAGATATATAAGGGCAGGTCTTCTGAGTAGAATT  50

seq1  AAAACAGACAGAGGATTTAGAAAATTACAGTAACACTCTGGATTCCTGGT  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAACAGACAGAGGATTTAGAAAGTTACAGTAACACTCTGGATTCCTGGT  100

seq1  GAGTGGGTGGGCTACATGAAATATTTAAGGTTGCTGTGTGAAGGGGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGTGGGCTACATGAAATATTTAAGGTTGCTGTGTGAAGGGGATGT  150

seq1  CATGGTGGAGCCTTGGTAACTTTTTGTAGGTTGTATGGGTTTTTGATTGG  200
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CATGGTGGAGCCTTGGTAACTTTTTGTAGTTTGTATGGGTTTTTGATTGG  200

seq1  TGAAGTCTAAAATGTGCTCTGTACATAGGCAGAAGACTGGGTGTAGCCAC  250
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGAAGTCTAAAATGTGCTCTGTGCATAGGCAGAAGACTGGGTGTAGCCAC  250

seq1  AAGGTGTGAATGTCTCCTGGATGTGAGAGGATGAAAGGTAGAGCCTGTGC  300
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAGGTGTGAATGTCTCCTGGCTGTGAGAGGATGAAAGGTAGAGCCTGTGC  300

seq1  TAGGGTCCTTTTAGGGAGATTCATTTAAGGCTATTTGACTTTCTTGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTCCTTTTAGGGAGATTCATTTAAGGCTATTTGACTTTCTTGAAAT  350

seq1  TCAATAACAGGGGGCATCTGGGTTATGTGTAAGAGTCTTTTGATATCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAACAGGGGGCATCTGGGTTATGTGTAAGAGTCTTTTGATATCCAG  400

seq1  GTTAATTATATCACCAATGCTCTTGGATGGATGAGTGTGGAATGAGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTATATCACCAATGCTCTTGGATGGATGAGTGTGGAATGAGATCT  450

seq1  ATTGGACTTACCTGTTCCATGGACCTTTATTAGTTGTTTTGAGACAGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACTTACCTGTTCCATGGACCTTTATTAGTTGTTTTGAGACAGATT  500

seq1  GTCCAGTAGAAAGGAGGAGAATCTAGCACCCTCTCTCCTTTTTTTTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTAGAAAGGAGGAGAATCTAGCACCCTCTCTCCTTTTTTTTACAT  550

seq1  TCATGATAATATTCCTTTTTTAAAAAATAAATTTTATTTAATCATTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATAATATTCCTTTTTTAAAAAATAAATTTTATTTAATCATTTTTA  600

seq1  CCTAGATTTTAGGCTAGATTTTATCCCCCTTCTGGTCCACACACTGACTG  650
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTAGATTTTAGGCTATATTTTATCCCCCTTCTGGTCCACACACTGACTG  650

seq1  TTCTTTATCACATACCTCTTCTTTCCTTCTCCAAAAAAATGTCCCCTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATCACATACCTCTTCTTTCCTTCTCCAAAAAAATGTCCCCTACC  700

seq1  CCACCCCCTTCCCTACAAAACTTTCTCACTCCCTACGTCCTCCTGTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCCTTCCCTACAAAACTTTCTCACTCCCTACGTCCTCCTGTCTCT  750

seq1  TGAGCTTTATGCGTATCTTCACTGACTGTGTCCAGACCCACAGTGTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTTATGCGTATCTTCACTGACTGTGTCCAGACCCACAGTGTCCTG  800

seq1  TTG-AATATGTGTTGTTGGCCTCATATCATCTGGTGTATGCTGCCTTGTT  849
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATGTGTTGTTGGCCTCATATCATCTGGTGTATGCTGCCTTGTT  850

seq1  GGTGGCCCAG-TTTTTGAGGGATCTTTGGGG-TTCAGGTT-AGTTG-AGA  895
      |||||||||| |||||||||||||||||||| |||||||| ||||| |||
seq2  GGTGGCCCAGTTTTTTGAGGGATCTTTGGGGTTTCAGGTTAAGTTGAAGA  900

seq1  CTGCTG-GTC-TTACTAC-AGGGTTGCCCTCCTCCTCAGCTTCTTCTA-G  941
      |||||| ||| ||||||| ||| ||||||||||||||||||||||||| |
seq2  CTGCTGTGTCTTTACTACAAGGTTTGCCCTCCTCCTCAGCTTCTTCTAGG  950

seq1  CTTTCACTAA-TTCAACCA-CGCGGGTCAGCGAACTTTGTC-AATCTGTT  988
      |||||||||| ||||| || | ||||||||||||||| ||| ||||||||
seq2  CTTTCACTAATTTCAAACACCACGGGTCAGCGAACTTGGTCAAATCTGTT  1000

seq1  -GGGTATG-AATATCTTCATCTG-ACTTTC-ATTTGCTTGCAGT-GTC-A  1032
       ||||||| ||| || ||||||| |||||| ||| ||||||||| ||| |
seq2  GGGGTATGAAATGTCCTCATCTGAACTTTCAATTGGCTTGCAGTGGTCAA  1050

seq1  TTTTAGGGGGCAATTA--TAATAGG--CCCCCTTTTTT--GAGCACA  1073
      ||| ||||||||||||   ||||||  |||||||||||  |||||||
seq2  TTTAAGGGGGCAATTAATAAATAGGGCCCCCCTTTTTTTGGAGCACA  1097