BAC Information

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BAC

Clone NameB6Ng01-310I08
Chromosome7 (Build37)
Map Location 66,005,228 - 66,006,430
singlet/doubletsinglet
Overlap geneAtp10a
Upstream geneGabrb3, EG668807, LOC434189
Downstream geneLOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310I08.bB6Ng01-310I08.g
ACCGA102475GA102476
length1,1841,196
definitionB6Ng01-310I08.b B6Ng01-310I08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttcaggaagtcttttcttgtgctaatgacttcaagactattg
tacattttggtcctctggaacctaagtgctgccaactctttcaacataga
ctaagcaacatagaaactcacccgttaagtcttaacagaaaatgtccagc
ggaatggaggagaaaggcagcttgtgtcttgccaagagaaagtgatgcct
catatgaaggtatgaatgatactcttggctcatatcccagcttctagacc
gcagggcccagcactgctcagtcatctctgctcattttcactttcggtct
ggaggagctaggagtagagacacctgctgacgtgtttcagctgccagatc
taagggtttttacagctctagttatgggcagcatagctgaggtctcctac
acacatattttagactactaaaatcaagaattacacattctggaacttaa
acctgaatttattttctcagtcctggagactggacgttaggggtcaaggt
agggttggctagggcttggtagggttggctccatctgagctgctctcttc
agtttgtgggtagccatttctttagtcttcactggttctttcctctgtga
cctcatctcctgtctttataaggagacagtcacaatgggtcagggcctac
tctaacactccattttaactcacatcttcaaaggcttgttccatgtatac
agtcatatttggtagttctgcataggactttgaaagaggcacaattcaac
catcagtgtattttcagagggaactttactccatgtgcagtgtcagtcac
attggtcatctccatgagctcattcaagctcactctgctcccagaggtgg
aaagtgccttttcttgatgaatttcccggccggaaaaatcagcaatagta
gaagagaaccttggctcagtaatatatggctccattcttccagaaagctg
actgtctgtgtattaatgtgctaattactaaaatctgggaatgacaggca
tcataaggagccagaatctgtgatggaacatattcagacttgtgctaaca
tggatagtgttgtgagttagaagatgtgttaaatgttcaagctatagtgc
aagaacagaagatctttttccctcaagtttttgttttttttttctatttt
tttcgagaatagtgaagagacccctttcaacccc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtctggagctgaaatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgcccacagtcagctaatggatggatcacaggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcaaccct
atagtggatcacatatgactaccagtaccccggagctctgactctagctg
catatgtatcaaaagatggctagtccgcatcactggtaaggaagagccca
atgaacacacaaactttattttgccccagaacatgggacgtcaagtcaaa
atggtaactgggtgggtttagtgactgtcgctatggtcattctact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_66005228_66006430
seq2: B6Ng01-310I08.b_44_1227

seq1  GAATTCTGTTCAGGAAGTCTTTTCTTGTGCTAATGACTTCAAGACTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCAGGAAGTCTTTTCTTGTGCTAATGACTTCAAGACTATTG  50

seq1  TACATTTTGGTCCTCTGGAACCTAAGTGCTGCCAACTCTTTCAACATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTGGTCCTCTGGAACCTAAGTGCTGCCAACTCTTTCAACATAGA  100

seq1  CTAAGCAACATAGAAACTCACCCGTTAAGTCTTAACAGAAAATGTCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAACATAGAAACTCACCCGTTAAGTCTTAACAGAAAATGTCCAGC  150

seq1  GGAATGGAGGAGAAAGGCAGCTTGTGTCTTGCCAAGAGAAAGTGATGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGAGGAGAAAGGCAGCTTGTGTCTTGCCAAGAGAAAGTGATGCCT  200

seq1  CATATGAAGGTATGAATGATACTCTTGGCTCATATCCCAGCTTCTAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAAGGTATGAATGATACTCTTGGCTCATATCCCAGCTTCTAGACC  250

seq1  GCAGGGCCCAGCACTGCTCAGTCATCTCTGCTCATTTTCACTTTCGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCCCAGCACTGCTCAGTCATCTCTGCTCATTTTCACTTTCGGTCT  300

seq1  GGAGGAGCTAGGAGTAGAGACACCTGCTGACGTGTTTCAGCTGCCAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGCTAGGAGTAGAGACACCTGCTGACGTGTTTCAGCTGCCAGATC  350

seq1  TAAGGGTTTTTACAGCTCTAGTTATGGGCAGCATAGCTGAGGTCTCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGTTTTTACAGCTCTAGTTATGGGCAGCATAGCTGAGGTCTCCTAC  400

seq1  ACACATATTTTAGACTACTAAAATCAAGAATTACACATTCTGGAACTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATTTTAGACTACTAAAATCAAGAATTACACATTCTGGAACTTAA  450

seq1  ACCTGAATTTATTTTCTCAGTCCTGGAGACTGGACGTTAGGGGTCAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAATTTATTTTCTCAGTCCTGGAGACTGGACGTTAGGGGTCAAGGT  500

seq1  AGGGTTGGCTAGGGCTTGGTAGGGTTGGCTCCATCTGAGCTGCTCTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGGCTAGGGCTTGGTAGGGTTGGCTCCATCTGAGCTGCTCTCTTC  550

seq1  AGTTTGTGGGTAGCCATTTCTTTAGTCTTCACTGGTTCTTTCCTCTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTGGGTAGCCATTTCTTTAGTCTTCACTGGTTCTTTCCTCTGTGA  600

seq1  CCTCATCTCCTGTCTTTATAAGGAGACAGTCACAATGGGTCAGGGCCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCTCCTGTCTTTATAAGGAGACAGTCACAATGGGTCAGGGCCTAC  650

seq1  TCTAACACTCCATTTTAACTCACATCTTCAAAGGCTTGTTCCATGTATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACACTCCATTTTAACTCACATCTTCAAAGGCTTGTTCCATGTATAC  700

seq1  AGTCATATTTGGTAGTTCTGCATAGGACTTTGAAAGAGGCACAATTCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATATTTGGTAGTTCTGCATAGGACTTTGAAAGAGGCACAATTCAAC  750

seq1  CATCAGTGTATTTTCAGAGGGAACTTTACTCCATGTGCAGTGTCAGTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTGTATTTTCAGAGGGAACTTTACTCCATGTGCAGTGTCAGTCAC  800

seq1  ATTGGTCATCTCCATGAGCTCATTCAAGCTCACTCTGCTCCCAGAGGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCATCTCCATGAGCTCATTCAAGCTCACTCTGCTCCCAGAGGTGG  850

seq1  AAAGTGCCTTTTCTTGATGAATTT-CCGGCCGGAAAAATCAGCAATAGTA  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAAGTGCCTTTTCTTGATGAATTTCCCGGCCGGAAAAATCAGCAATAGTA  900

seq1  GAAGAGAACCTTGGCTCAGTAATATATGGCTCCATTCTTCCAGAAAGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAACCTTGGCTCAGTAATATATGGCTCCATTCTTCCAGAAAGCTG  950

seq1  ACTGTCTGTGTATTAATGTGCTAATTACTAAAATCTGGGAATGACAGGGC  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACTGTCTGTGTATTAATGTGCTAATTACTAAAATCTGGGAATGACA-GGC  999

seq1  ATCATAAGGAGCCAGAATCTGTGATGGAACAATATTCAGAACTTGTGCT-  1048
      |||||||||||||||||||||||||||||| |||||||| ||||||||| 
seq2  ATCATAAGGAGCCAGAATCTGTGATGGAAC-ATATTCAG-ACTTGTGCTA  1047

seq1  ACATGGATTTATTTGTTTGTTTGTTTTTAGAGATGTGTTAAATG-TCAAG  1097
      ||||||||    ||||  ||| |       |||||||||||||| |||||
seq2  ACATGGATAGTGTTGTGAGTTAG------AAGATGTGTTAAATGTTCAAG  1091

seq1  CTATTAGTTGCCAAGACAGAAGAATCTTTTT-CCTCAAGTTTTTTGTTTT  1146
      ||| ||| ||| |  ||||||| |||||||| |||||||||||   | ||
seq2  CTA-TAG-TGCAAGAACAGAAG-ATCTTTTTCCCTCAAGTTTT---TGTT  1135

seq1  TTTTTTTTCTTTTTTTTTTTTTTCTGTAGA-AATAGTGAAAGAACACCTT  1195
      |||||||||| ||||||         | || |||||||||   || ||||
seq2  TTTTTTTTCTATTTTTT---------TCGAGAATAGTGAAGAGACCCCTT  1176

seq1  TCAACCCC  1203
      ||||||||
seq2  TCAACCCC  1184