BAC Information

Click to search

BAC

Clone NameB6Ng01-310K18
Chromosome7 (Build37)
Map Location 22,872,187 - 22,951,004
singlet/doubletdoublet
Overlap geneEG667444, LOC100043033, LOC100043037, EG667464
Upstream geneLOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736
Downstream geneEG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512, LOC100043061, LOC100043638, LOC667527, EG667530, LOC667536, EG667543, LOC100043645, EG667551, LOC100043650, LOC100043067, LOC100043069, LOC670857, LOC620758, EG667570, LOC100043658, LOC100043079, LOC100043083, EG667586, EG667599, LOC100043086, LOC100043665, LOC667616
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310K18.bB6Ng01-310K18.g
ACCGA102587GA102588
length1,2071,130
definitionB6Ng01-310K18.b B6Ng01-310K18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,949,796 - 22,951,004)(22,872,187 - 22,872,850)
sequence
gaattcatgagtatatcagaaaaaaaagtcataatctatctgaaaacaag
tggatattggaataacaacaggattcaggtgggaaagaccagtttcaata
aatttgtcatttatgaacgtcctgggacaaacatgggaaaagttggaatg
aagcaacttccagggaaattacagaatccgactgatacattgccagtatt
ttgggaggacttggtgtcagaataattttgcaagagtaaaatagtaggga
ggaaagtactctgtagaaactcatataatgagtctcttgttctaccctgg
agcgccccaattcacatctgaccatgagatcaattcagaacttagattct
cccaaaggaaacatgaaaacccttccctaacttctgcccaggtactcatt
aacatctaacaaactcctagacatcatcagtaaacatcagaaaggaatgg
aggtttgctctggggataaatgattttccttcattggaggtatcccaaag
acaccatgcagacaaatgtgcggatgccacagatgacacaataataaact
ctctgaaggatgtcatgtcccagtgccctattgttttatgagactggaaa
cttggactttgttgggttaccttcacagcattgcatggagaataaaaaac
cattccgaatttcattgcattctttctcaggcaaagagtgacacagagaa
gttcctcaatccaggcactaggaaatatgcttctaaaggagctgtgctct
gcagctggccttcagatgaaaatattcatcctgactgaggctcagaaggt
gggattcttccaaccatagacttctgcttaaaattctcttctattttctt
cagtgaaaattgtcttctgaagtcaacatgaaacattatttcttttggaa
gtctgcaggtaaacttaaataggttaatattttgcttttatctcaaagaa
atgtctctgtcctagattagtactcagaaaaaaacagcattcagtgtaca
tgtatgtgagatgttgaattttattctggtgatggggtcctcatgttcct
acagaacatatacagtaaaatgcagacttaggcatcagctttcaaaggtg
ttacagtgattgtgtagttaccttggagggaagctgcaagggtgaacaca
gctagctctggccaagaacattttcagaaccaaaattacggtctcaggga
aaaatat
gaattctctgccctgccttaaccacttgttgacattcctcgtcctttaag
cacgatcttaacagcttccacaacggcatgtttcctgctttaagtttgcc
attctccagttccctaactaaatctcccttgagtttctcccaagagggga
tagttaaggtccctgagcacgcaaaccacggtgctatgcgatctacctct
tttacaaagccttctagtgtcttggtggcgactttcaagccacactgctt
caggaccgaccgtaaggtggtcaccacagagtgggaggcccccatactgg
tcgctgtccaggcctgaccgcgactgagaaccagtcagcaataccaccgg
tggaaatagtatgtagtcaaaagaaaaagaacgagccctgtgaaaaggaa
cagaaaggcttctaatgctagagaaagttcaagacagaacgtaccttgta
gagctgtaaagtgtcccgtagttctgaacccgccccgtgaaacggggggg
ggttcctcctatcagggcctggtgatgataaattcccgggtttctcggcg
ccacttcttgcccgagttagtatctcgccggcaagaattcacttggacaa
ccggatccttctacggcaaagcttttcttgcttcaacataaggaagaccc
cgaactggaaaatggtgctgcttatatagcccgcagcgtgacgtttcagc
acctgatgtggcgtgacagcacctgattagttgctcgcccatcaccccat
tactacgccccgagatgggcagtgactgggcgtgaatttactcttgcact
tgcacataaggcttgtttactagctaggcgcagtggaagccagcaccatc
ttataatggcgattgctcacagcacggctctccacactgggcatatatcc
agaagatgttccaactgttaataagaacacatgctcccactatgttcata
gcagcctttggtttttgttctgcatcaaaagggctctgattcctttgagc
aagtaggagctttctgtagtgcctcctttatcaataagaacattttataa
tcatgttgttttcctaggtttgagatcagctttttcttaatacacctggg
ggaagaattttacagtccataactcaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22949796_22951004
seq2: B6Ng01-310K18.b_50_1256 (reverse)

seq1  ATATTTTTCC---TGACCTTAATTTTTGTTCT-AAAATGTCCTGTGCCAG  46
      ||||||||||    |||| ||||||| ||||| ||||||| ||  |||||
seq2  ATATTTTTCCCTGAGACCGTAATTTTGGTTCTGAAAATGTTCTTGGCCAG  50

seq1  AGCCTTAGCTGTG-TCACC--TGCAGCTTCCCTCCAAAGTTACTAACACA  93
      |||  |||||||| |||||  |||||||||||||||| || ||| |||||
seq2  AGC--TAGCTGTGTTCACCCTTGCAGCTTCCCTCCAAGGTAACT-ACACA  97

seq1  ATCACTGTTACACCCTTTGGAAGCTGATG-CTTAGTCTGCATTTTACTTG  142
      |||||||| ||| |||||| ||||||||| || ||||||||||||||   
seq2  ATCACTGTAACA-CCTTTGAAAGCTGATGCCTAAGTCTGCATTTTAC---  143

seq1  TTTATATGTTTTCTGTAGGAACATGAGGGCCCCATCCACCAG-ATAAAAT  191
      | ||||||  |||||||||||||||||| |||||| |||||| |||||||
seq2  TGTATATG--TTCTGTAGGAACATGAGGACCCCAT-CACCAGAATAAAAT  190

seq1  TCAACATCTCACATACATGTTACACTGAATGCTGTTTTCTCCTGAGTACT  241
      ||||||||||||||||||| |||||||||||||||||| | |||||||||
seq2  TCAACATCTCACATACATG-TACACTGAATGCTGTTTTTTTCTGAGTACT  239

seq1  AATCTAGGACAGAGACATTTCTTTGAGATAAAAGCAAAATATTAACCTAT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGGACAGAGACATTTCTTTGAGATAAAAGCAAAATATTAACCTAT  289

seq1  TTAAGTTTACCTGCAGACTTCCAAAAGAAATAATGTTTCATGTTGACTTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTACCTGCAGACTTCCAAAAGAAATAATGTTTCATGTTGACTTC  339

seq1  AGAAGACAATTTTCACTGAAGAAAATAGAAGAGAATTTTAAGCAGAAGTC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACAATTTTCACTGAAGAAAATAGAAGAGAATTTTAAGCAGAAGTC  389

seq1  TATGGTTGGAAGAATCCCACCTTCTGAGCCTCAGTCAGGATGAATATTTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTGGAAGAATCCCACCTTCTGAGCCTCAGTCAGGATGAATATTTT  439

seq1  CATCTGAAGGCCAGCTGCAGAGCACAGCTCCTTTAGAAGCATATTTCCTA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAAGGCCAGCTGCAGAGCACAGCTCCTTTAGAAGCATATTTCCTA  489

seq1  GTGCCTGGATTGAGGAACTTCTCTGTGTCACTCTTTGCCTGAGAAAGAAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGATTGAGGAACTTCTCTGTGTCACTCTTTGCCTGAGAAAGAAT  539

seq1  GCAATGAAATTCGGAATGGTTTTTTATTCTCCATGCAATGCTGTGAAGGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAAATTCGGAATGGTTTTTTATTCTCCATGCAATGCTGTGAAGGT  589

seq1  AACCCAACAAAGTCCAAGTTTCCAGTCTCATAAAACAATAGGGCACTGGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAACAAAGTCCAAGTTTCCAGTCTCATAAAACAATAGGGCACTGGG  639

seq1  ACATGACATCCTTCAGAGAGTTTATTATTGTGTCATCTGTGGCATCCGCA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACATCCTTCAGAGAGTTTATTATTGTGTCATCTGTGGCATCCGCA  689

seq1  CATTTGTCTGCATGGTGTCTTTGGGATACCTCCAATGAAGGAAAATCATT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTCTGCATGGTGTCTTTGGGATACCTCCAATGAAGGAAAATCATT  739

seq1  TATCCCCAGAGCAAACCTCCATTCCTTTCTGATGTTTACTGATGATGTCT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCAGAGCAAACCTCCATTCCTTTCTGATGTTTACTGATGATGTCT  789

seq1  AGGAGTTTGTTAGATGTTAATGAGTACCTGGGCAGAAGTTAGGGAAGGGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTTGTTAGATGTTAATGAGTACCTGGGCAGAAGTTAGGGAAGGGT  839

seq1  TTTCATGTTTCCTTTGGGAGAATCTAAGTTCTGAATTGATCTCATGGTCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTTTCCTTTGGGAGAATCTAAGTTCTGAATTGATCTCATGGTCA  889

seq1  GATGTGAATTGGGGCGCTCCAGGGTAGAACAAGAGACTCATTATATGAGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAATTGGGGCGCTCCAGGGTAGAACAAGAGACTCATTATATGAGT  939

seq1  TTCTACAGAGTACTTTCCTCCCTACTATTTTACTCTTGCAAAATTATTCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAGAGTACTTTCCTCCCTACTATTTTACTCTTGCAAAATTATTCT  989

seq1  GACACCAAGTCCTCCCAAAATACTGGCAATGTATCAGTCGGATTCTGTAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAAGTCCTCCCAAAATACTGGCAATGTATCAGTCGGATTCTGTAA  1039

seq1  TTTCCCTGGAAGTTGCTTCATTCCAACTTTTCCCATGTTTGTCCCAGGAC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGGAAGTTGCTTCATTCCAACTTTTCCCATGTTTGTCCCAGGAC  1089

seq1  GTTCATAAATGACAAATTTATTGAAACTGGTCTTTCCCACCTGAATCCTG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATAAATGACAAATTTATTGAAACTGGTCTTTCCCACCTGAATCCTG  1139

seq1  TTGTTATTCCAATATCCACTTGTTTTCAGATAGATTATGACTTTTTTTTC  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTCCAATATCCACTTGTTTTCAGATAGATTATGACTTTTTTTTC  1189

seq1  TGATATACTCATGAATTC  1209
      ||||||||||||||||||
seq2  TGATATACTCATGAATTC  1207

seq1: chr7_22872187_22872850
seq2: B6Ng01-310K18.g_528_1199

seq1  AAGTGTCCCGTAGTTCTGAACCCGCCCCGTGAAACGGGGGGGGGTTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCCCGTAGTTCTGAACCCGCCCCGTGAAACGGGGGGGGGTTCCTC  50

seq1  CTATCAGGGCCTGGTGATGATAAATTCCCGGGTTTCTCGGCGCCACTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGGGCCTGGTGATGATAAATTCCCGGGTTTCTCGGCGCCACTTCT  100

seq1  TGCCCGAGTTAGTATCTCGCCGGCAAGAATTCACTTGGACAACCGGATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCGAGTTAGTATCTCGCCGGCAAGAATTCACTTGGACAACCGGATCC  150

seq1  TTCTACGGCAAAGCTTTTCTTGCTTCAACATAAGGAAGACCCCGAACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACGGCAAAGCTTTTCTTGCTTCAACATAAGGAAGACCCCGAACTGG  200

seq1  AAAATGGTGCTGCTTATATAGCCCGCAGCGTGACGTTTCAGCACCTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTGCTGCTTATATAGCCCGCAGCGTGACGTTTCAGCACCTGATG  250

seq1  TGGCGTGACAGCACCTGATTAGTTGCTCGCCCATCACCCCATTACTACGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGTGACAGCACCTGATTAGTTGCTCGCCCATCACCCCATTACTACGC  300

seq1  CCCGAGATGGGCAGTGACTGGGCGTGAATTTACTCTTGCACTTGCACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGATGGGCAGTGACTGGGCGTGAATTTACTCTTGCACTTGCACATA  350

seq1  AGGCTTGTTTACTAGCTAGGCGCAGTGGAAGCCAGCACCATCTTATAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGTTTACTAGCTAGGCGCAGTGGAAGCCAGCACCATCTTATAATG  400

seq1  GCGATTGCTCACAGCACGGCTCTCCACACTGGGCATATATCCAGAAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATTGCTCACAGCACGGCTCTCCACACTGGGCATATATCCAGAAGATG  450

seq1  TTCCAACTGTTAATAAGAACACATGCT-CCACTATGTTCATAGCAGCCTT  499
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTCCAACTGTTAATAAGAACACATGCTCCCACTATGTTCATAGCAGCCTT  500

seq1  TGGTTTTTGTTCTGCATCAAAA-GGCTCTGATTCCTTTGAGCAAGTAAGA  548
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  TGGTTTTTGTTCTGCATCAAAAGGGCTCTGATTCCTTTGAGCAAGTAGGA  550

seq1  GCTTTCTGTAGTTGCTCCTTTATCAAT-AGAACATTTTAT-ATCATGTTG  596
      ||||||||||||  ||||||||||||| |||||||||||| |||||||||
seq2  GCTTTCTGTAGTGCCTCCTTTATCAATAAGAACATTTTATAATCATGTTG  600

seq1  TATTTCCTAGGTTTTGAAGATCAGC-TTTTCTT-ATACA-CTGGGG--AG  641
      | ||||||||||||   |||||||| ||||||| ||||| ||||||  ||
seq2  T-TTTCCTAGGTTT--GAGATCAGCTTTTTCTTAATACACCTGGGGGAAG  647

seq1  -ATTTTACAGT-CATTACTCAATTC  664
       |||||||||| ||| |||||||||
seq2  AATTTTACAGTCCATAACTCAATTC  672