BAC Information

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BAC

Clone NameB6Ng01-313B01
Chromosome7 (Build37)
Map Location 51,699,186 - 51,880,913
singlet/doubletdoublet
Overlap geneLrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14
Upstream geneEtfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3
Downstream gene1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5, Nup62, Il4i1, Tbc1d17, Akt1s1, Pnkp, Ptov1, Med25, Fuz, Ap2a1, Stk22s1, Cpt1c, Prmt1, Bcl2l12, Irf3, AI480556, Rras, Prr12, Prrg2, Nosip, Rcn3, Fcgrt, Rps11, Rnu35b, Rpl13a, Rnu35a, Rnu34, Rnu33, Rnu32, Flt3l, Aldh16a1, Pih1d1, Slc17a7, Gm581, LOC100039953, Tifp39, BC050196, Dkkl1, Tead2, Cd37, Slc6a16, 1700039E15Rik, Trpm4, LOC100040970, Hrc, 2410127E16Rik, Mtag2, Lin7b, Snrp70, Kcna7, Ntf5, LOC100040019, Lhb, Ruvbl2, Gys1, Ftl1, Bax, Dhdh, Nucb1, Tulp2, Myd116, Plekha4, Hsd17b14, Bcat2, Fgf21, Fut1, Izumo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313B01.bB6Ng01-313B01.g
ACCGA104377GA104378
length938631
definitionB6Ng01-313B01.b B6Ng01-313B01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,699,186 - 51,700,122)(51,880,283 - 51,880,913)
sequence
gaattcctgcatcccagacacagacatgggggtccctactgctccatccc
cactccatcagctcctcagccctgtcctgcgacagccgctggcacaggtc
ccgccacaggctgtgttcccttggagcacctgcaatcttgaggcccatgg
gcactgctatagtctccaacagggccaccacagggtgggggcaccccaac
agcctcccacctcctgccagaaacccagctacctcctgtcccctctcgat
tacctctcctccaagtctaggacaggacagggcctgagtggagtgaggga
tgaccccagggtgggcaggagggcatacagagatgggccttcatgtctgg
ttctggtgcccgtacacctggacagagacctgcagggagggatggaggga
tgggacgctgcctcccaggggacctgcaacccgcttggtgtgtgatagga
gttgatcagtgttgcttttcaccccggcagagcctttgcctcattgtctg
tctgtctgtccctctatctctacatacttacctgtctaactgaactcaat
gcaatgacacaacttaaaaaaaatttttttaacaaacagttctaggggtg
gaaacaaaggccttgagcatcctgggaatgtgccccaccgcccagccaca
tgttgactttttagttttgaacgaggtctcactgcattgcccaggttggc
tctggatgtactctctctagcccaggccagtctgcaacttacaatgctcc
tgcctcgacatcttgagcaactacaagggcagtcctgcgaacccaggcct
ggcaagacctaagtttgaatctagctgacttgccatttactaaccagtga
ccttgaggcacaaatgttctcctctcctgcctaatttatccattctggca
tactgcccagaggaggatgaggttctgtctcaggaagg
gaattcctgtcctctctcccctgcccacatcaaaggtccaagagggagca
ggaggtgacagagctgaagaaagcattggaagaggagtcccgtgcccatg
aggtgtccatgcaggagctgagacagaggcatagccaggcactggtggag
atggccgagcagttggagcaagcccggagggtgagtaggtagcgaccggc
caccctctgggatatagccttgaataagtgttcattgcataactacttaa
actgaatccttggtgcaaagaaaatattgaaccaaaggccatgggcatga
ggagtgagcgatgacgctgagtgtatggaggctctgaggtagagctcagc
aagcccacccattccacgcagggcaaaggtgtgtgggagaagactcggct
atccctggaggctgaggtgtccgagctgaaggccgagctgagcagcctgc
agacctcgagacaggagggtgagcagaagaggcgccgcctggagtcccag
ctacaggaggtccagggccgatccagtgattcggagcgggctcggtctga
ggctgctgagaagctgcagagagcccaggtaggcggggtcacggggcgtc
atgtgacaaaccctgtgggtgggggtgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51699186_51700122
seq2: B6Ng01-313B01.b_47_984

seq1  GAATTCCTGCATCCCAGACACAGACATGGGGGTCCCTACTGCTCCATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCATCCCAGACACAGACATGGGGGTCCCTACTGCTCCATCCC  50

seq1  CACTCCATCAGCTCCTCAGCCCTGTCCTGCGACAGCCGCTGGCACAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCATCAGCTCCTCAGCCCTGTCCTGCGACAGCCGCTGGCACAGGTC  100

seq1  CCGCCACAGGCTGTGTTCCCTTGGAGCACCTGCAATCTTGAGGCCCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCACAGGCTGTGTTCCCTTGGAGCACCTGCAATCTTGAGGCCCATGG  150

seq1  GCACTGCTATAGTCTCCAACAGGGCCACCACAGGGTGGGGGCACCCCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCTATAGTCTCCAACAGGGCCACCACAGGGTGGGGGCACCCCAAC  200

seq1  AGCCTCCCACCTCCTGCCAGAAACCCAGCTACCTCCTGTCCCCTCTCGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCCACCTCCTGCCAGAAACCCAGCTACCTCCTGTCCCCTCTCGAT  250

seq1  TACCTCTCCTCCAAGTCTAGGACAGGACAGGGCCTGAGTGGAGTGAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTCCTCCAAGTCTAGGACAGGACAGGGCCTGAGTGGAGTGAGGGA  300

seq1  TGACCCCAGGGTGGGCAGGAGGGCATACAGAGATGGGCCTTCATGTCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCCAGGGTGGGCAGGAGGGCATACAGAGATGGGCCTTCATGTCTGG  350

seq1  TTCTGGTGCCCGTACACCTGGACAGAGACCTGCAGGGAGGGATGGAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGCCCGTACACCTGGACAGAGACCTGCAGGGAGGGATGGAGGGA  400

seq1  TGGGACGCTGCCTCCCAGGGGACCTGCAACCCGCTTGGTGTGTGATAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACGCTGCCTCCCAGGGGACCTGCAACCCGCTTGGTGTGTGATAGGA  450

seq1  GTTGATCAGTGTTGCTTTTCACCCCGGCAGAGCCTTTGCCTCATTGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATCAGTGTTGCTTTTCACCCCGGCAGAGCCTTTGCCTCATTGTCTG  500

seq1  TCTGTCTGTCCCTCTATCTCTACATACTTACCTGTCTAACTGAACTCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCCCTCTATCTCTACATACTTACCTGTCTAACTGAACTCAAT  550

seq1  GCAATGACACAACTTAAAAAAAATTTTTTTAACAAACAGTTCTAGGGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGACACAACTTAAAAAAAATTTTTTTAACAAACAGTTCTAGGGGTG  600

seq1  GAAACAAAGGCCTTGAGCATCCTGGGAATGTGCCCCACCGCCCAGCCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAGGCCTTGAGCATCCTGGGAATGTGCCCCACCGCCCAGCCACA  650

seq1  TGTTGACTTTTTAGTTTTGAACGAGGTCTCACTGCATTGCCCAGGTTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACTTTTTAGTTTTGAACGAGGTCTCACTGCATTGCCCAGGTTGGC  700

seq1  TCTGGATGTACTCTCTCTAGCCCAGGCCAGTCTGCAACTTTCAATGCTCC  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTGGATGTACTCTCTCTAGCCCAGGCCAGTCTGCAACTTACAATGCTCC  750

seq1  TGCCTCGACATCTTGAGCAACTACAAGGGCAGTCCTGCGACCCCAGGCCT  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCCTCGACATCTTGAGCAACTACAAGGGCAGTCCTGCGAACCCAGGCCT  800

seq1  GGCAGGACCTAAGTTTGAATCTAGCTGACGTTGCCATTTACTAACCAAGT  850
      |||| |||||||||||||||||||||||| |||||||||||||||| |||
seq2  GGCAAGACCTAAGTTTGAATCTAGCTGAC-TTGCCATTTACTAACC-AGT  848

seq1  GACCTTG-GGCACAAATGTCCT-CTCTCTTGCCTCATTTATCCTTTCT-G  897
      ||||||| ||||||||||| || ||||| ||||| |||||||| |||| |
seq2  GACCTTGAGGCACAAATGTTCTCCTCTCCTGCCTAATTTATCCATTCTGG  898

seq1  CAGAATGGCCCAGAGGAGGATGAGG-TCTGGCACAGGAAGG  937
      || | | |||||||||||||||||| |||| | ||||||||
seq2  CATACT-GCCCAGAGGAGGATGAGGTTCTGTCTCAGGAAGG  938

seq1: chr7_51880283_51880913
seq2: B6Ng01-313B01.g_68_698 (reverse)

seq1  TCCCCACCCCCACCCACAGGGTTTGTCACATGACGCCCCGTGACCCCGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACCCCCACCCACAGGGTTTGTCACATGACGCCCCGTGACCCCGCC  50

seq1  TACCTGGGCTCTCTGCAGCTTCTCAGCAGCCTCAGACCGAGCCCGCTCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGGCTCTCTGCAGCTTCTCAGCAGCCTCAGACCGAGCCCGCTCCG  100

seq1  AATCACTGGATCGGCCCTGGACCTCCTGTAGCTGGGACTCCAGGCGGCGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTGGATCGGCCCTGGACCTCCTGTAGCTGGGACTCCAGGCGGCGC  150

seq1  CTCTTCTGCTCACCCTCCTGTCTCGAGGTCTGCAGGCTGCTCAGCTCGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGCTCACCCTCCTGTCTCGAGGTCTGCAGGCTGCTCAGCTCGGC  200

seq1  CTTCAGCTCGGACACCTCAGCCTCCAGGGATAGCCGAGTCTTCTCCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCTCGGACACCTCAGCCTCCAGGGATAGCCGAGTCTTCTCCCACA  250

seq1  CACCTTTGCCCTGCGTGGAATGGGTGGGCTTGCTGAGCTCTACCTCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTGCCCTGCGTGGAATGGGTGGGCTTGCTGAGCTCTACCTCAGAG  300

seq1  CCTCCATACACTCAGCGTCATCGCTCACTCCTCATGCCCATGGCCTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATACACTCAGCGTCATCGCTCACTCCTCATGCCCATGGCCTTTGG  350

seq1  TTCAATATTTTCTTTGCACCAAGGATTCAGTTTAAGTAGTTATGCAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATTTTCTTTGCACCAAGGATTCAGTTTAAGTAGTTATGCAATGA  400

seq1  ACACTTATTCAAGGCTATATCCCAGAGGGTGGCCGGTCGCTACCTACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTATTCAAGGCTATATCCCAGAGGGTGGCCGGTCGCTACCTACTCA  450

seq1  CCCTCCGGGCTTGCTCCAACTGCTCGGCCATCTCCACCAGTGCCTGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCGGGCTTGCTCCAACTGCTCGGCCATCTCCACCAGTGCCTGGCTA  500

seq1  TGCCTCTGTCTCAGCTCCTGCATGGACACCTCATGGGCACGGGACTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGTCTCAGCTCCTGCATGGACACCTCATGGGCACGGGACTCCTC  550

seq1  TTCCAATGCTTTCTTCAGCTCTGTCACCTCCTGCTCCCTCTTGGACCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATGCTTTCTTCAGCTCTGTCACCTCCTGCTCCCTCTTGGACCTTT  600

seq1  GATGTGGGCAGGGGAGAGAGGACAGGAATTC  631
      |||||||||||||||||||||||||||||||
seq2  GATGTGGGCAGGGGAGAGAGGACAGGAATTC  631