BAC Information

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BAC

Clone NameB6Ng01-313K23
Chromosome7 (Build37)
Map Location 83,899,549 - 84,020,225
singlet/doubletdoublet
Overlap geneEG244071
Upstream geneKlhl25, LOC100042210, LOC434200
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313K23.bB6Ng01-313K23.g
ACCGA104826GA104827
length1,157657
definitionB6Ng01-313K23.b B6Ng01-313K23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,019,060 - 84,020,225)(83,899,549 - 83,900,204)
sequence
gaattcttcctagaaacactctcagaacctttatgaaatgcacgtatagg
atgagagtgagggtgacctttgagaattttgtacaaattatttttattat
tttaatcacatagatctatgtttctgggtatgtatatgtacctgtgagct
cagaagcccacaggggctagagatgttggatctttccagtggtgaagtta
tatgtagttgtgaactgacctatatgaatatcggacacttaatttggatt
gtctgcaagtgtagtagtgctcctaactgctgagccacctctccagacct
attatggtttttaaaacacttcagagaaggcggtgaactagaactcagtt
tgtgcatccgccaccttgacatgcacccagcagagaagttagaactgagc
caatctatctatgcagagctgaaatctctaataggtagcaaggaagaaag
agagaggccggtggacaggctccatggcctcctcgcatatcgactccatc
aaatggactttaatgctttcatgctggggaccaaatcaatcagaaaacgt
gttggtgtctctgccagactctatctcatgggttcttctatacaaagtgc
cccccgcccagtccccatcctttcagaccaagtttcctcttccattactg
acaaatgtttccctagtaactaaaagaaaaaaaaataataaagccaacca
tagattcactggaccagcagggcacaaagtgtgatctggatttcaaatat
gtccttatttctatgttggacttactgggtcttttattggtgatattgtc
cctattccatgaatgaccacataacagacagcaaagctgtctgtgcgtgc
ctttcatgtctttaagaaccacaagcctgtggtaaattgtgaagcaatat
tgtgtctttaaatagcctagaatttaagcaagcttatttctctgatccgc
agatatataaactggtatttctgtatgcaaagttatatagataggaccaa
cacaggatgacacaattccttgttcttaggcagcacagacttattataaa
tagtcatattcattatattgtttcttcaaaagctttgaaggatttggagg
ttcttcttttattaggtatacatttccaagctcttggttctttgattcct
tctacca

gaattcttcttccatcaaattataggcacacagacagatgaacaaaaatt
taaaataaaaactaagtacatgaatagaaggacgagttgtgaggtaatgt
gtacaggactgattgcttctctgtggtacaggattgattagattatcctg
ggcgacttccatagactttttattttactttttttttgaggtataaatct
aatgatatgtgttaggaccttacatctagaaaatcatctcatgagaaaac
ttttagtttagatattatttctagaaaacttggaagaaatacaagccaga
aattctgttatgattaaaagttgaatccgaaagaacctgcatgtccaggt
gaatgatagagtactgagttgagataaactgaatgttggctttgtgcaac
actgctaagcatgcaatccctttttgtgacattttcagtcattgattctc
ttcatagattgctatttctcaggagttattagagataagaataattcata
ctcctcccacagtgccaatgtcaaagaccaatgtaattctctacatgcct
ttatttatatatatatatatatatatatatatatatatttatataatttt
tggacgggggtgttgttgagacagggttttctctgtgtagatctggctgt
actggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84019060_84020225
seq2: B6Ng01-313K23.b_47_1203 (reverse)

seq1  TGGTAGAAGTATTCAAAAAGAACAAGAGCTTTGGGAATGTATAACCTTAA  50
      ||||||||| | ||||| | | ||||||| |||| ||||||||  | |||
seq2  TGGTAGAAGGAATCAAAGA-ACCAAGAGC-TTGGAAATGTATA--CCTAA  46

seq1  TAAAAGAAG-ACTTCCAAATCTTTCAAAAGCTTTTTGAGAAACAATTATA  99
      ||||||||| || |||||||| ||| |||||||||  |||||||||   |
seq2  TAAAAGAAGAACCTCCAAATCCTTC-AAAGCTTTTGAAGAAACAATATAA  95

seq1  TGAATATTGACTTATTTAT-ATAAGTCTTGTGCTGCCTTAGAACAAGGAT  148
      |||||| |||| ||||||| ||||||| |||||||||| |||||||||| 
seq2  TGAATA-TGAC-TATTTATAATAAGTC-TGTGCTGCCTAAGAACAAGGAA  142

seq1  TTGTGTCATCCTTGTGTTGGTCCTTATCTATATAACTTTGCATACAGAAA  198
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  TTGTGTCATCC-TGTGTTGGTCC-TATCTATATAACTTTGCATACAGAAA  190

seq1  TACCAGTTTATATATCTGCGGATCAGAGAAATAAGCTTGCTTAAATTCTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGTTTATATATCTGCGGATCAGAGAAATAAGCTTGCTTAAATTCTA  240

seq1  GGCTATTTAAAGACACAATATTTGCTTCACAATTTACCACAGGCTTGTGG  298
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGCTATTTAAAGACACAATA-TTGCTTCACAATTTACCACAGGCTTGTGG  289

seq1  TTCTTAAAGACATGAAAGGCACGCACAGACAGCTTTGCTGTCTGTTATGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAAGACATGAAAGGCACGCACAGACAGCTTTGCTGTCTGTTATGT  339

seq1  GGTCATTCATGGAATAGGGACAATATCACCAATAAAAGACCCAGTAAGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTCATGGAATAGGGACAATATCACCAATAAAAGACCCAGTAAGTC  389

seq1  CAACATAGAAATAAGGACATATTTGAAATCCAGATCACACTTTGTGCCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATAGAAATAAGGACATATTTGAAATCCAGATCACACTTTGTGCCCT  439

seq1  GCTGGTCCAGTGAATCTATGGTTGGCTTTATTATTTTTTTTTCTTTTAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCCAGTGAATCTATGGTTGGCTTTATTATTTTTTTTTCTTTTAGT  489

seq1  TACTAGGGAAACATTTGTCAGTAATGGAAGAGGAAACTTGGTCTGAAAGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGGAAACATTTGTCAGTAATGGAAGAGGAAACTTGGTCTGAAAGG  539

seq1  ATGGGGACTGGGCGGGGGGCACTTTGTATAGAAGAACCCATGAGATAGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGACTGGGCGGGGGGCACTTTGTATAGAAGAACCCATGAGATAGAG  589

seq1  TCTGGCAGAGACACCAACACGTTTTCTGATTGATTTGGTCCCCAGCATGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGAGACACCAACACGTTTTCTGATTGATTTGGTCCCCAGCATGA  639

seq1  AAGCATTAAAGTCCATTTGATGGAGTCGATATGCGAGGAGGCCATGGAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTAAAGTCCATTTGATGGAGTCGATATGCGAGGAGGCCATGGAGC  689

seq1  CTGTCCACCGGCCTCTCTCTTTCTTCCTTGCTACCTATTAGAGATTTCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCACCGGCCTCTCTCTTTCTTCCTTGCTACCTATTAGAGATTTCAG  739

seq1  CTCTGCATAGATAGATTGGCTCAGTTCTAACTTCTCTGCTGGGTGCATGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATAGATAGATTGGCTCAGTTCTAACTTCTCTGCTGGGTGCATGT  789

seq1  CAAGGTGGCGGATGCACAAACTGAGTTCTAGTTCACCGCCTTCTCTGAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGGCGGATGCACAAACTGAGTTCTAGTTCACCGCCTTCTCTGAAG  839

seq1  TGTTTTAAAAACCATAATAGGTCTGGAGAGGTGGCTCAGCAGTTAGGAGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAAAACCATAATAGGTCTGGAGAGGTGGCTCAGCAGTTAGGAGC  889

seq1  ACTACTACACTTGCAGACAATCCAAATTAAGTGTCCGATATTCATATAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTACACTTGCAGACAATCCAAATTAAGTGTCCGATATTCATATAGG  939

seq1  TCAGTTCACAACTACATATAACTTCACCACTGGAAAGATCCAACATCTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCACAACTACATATAACTTCACCACTGGAAAGATCCAACATCTCT  989

seq1  AGCCCCTGTGGGCTTCTGAGCTCACAGGTACATATACATACCCAGAAACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGTGGGCTTCTGAGCTCACAGGTACATATACATACCCAGAAACA  1039

seq1  TAGATCTATGTGATTAAAATAATAAAAATAATTTGTACAAAATTCTCAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTATGTGATTAAAATAATAAAAATAATTTGTACAAAATTCTCAAA  1089

seq1  GGTCACCCTCACTCTCATCCTATACGTGCATTTCATAAAGGTTCTGAGAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCCTCACTCTCATCCTATACGTGCATTTCATAAAGGTTCTGAGAG  1139

seq1  TGTTTCTAGGAAGAATTC  1166
      ||||||||||||||||||
seq2  TGTTTCTAGGAAGAATTC  1157


seq1: chr7_83899549_83900204
seq2: B6Ng01-313K23.g_67_723

seq1  GAATTCTTCTTCCATCAAATTATAGGCACACAGACAGATGAACAAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTCCATCAAATTATAGGCACACAGACAGATGAACAAAAATT  50

seq1  TAAAATAAAAACTAAGTACATGAATAGAAGGACGAGTTGTGAGGTAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAAACTAAGTACATGAATAGAAGGACGAGTTGTGAGGTAATGT  100

seq1  GTACAGGACTGATTGCTTCTCTGTGGTACAGGATTGATTAGATTATCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGACTGATTGCTTCTCTGTGGTACAGGATTGATTAGATTATCCTG  150

seq1  GGCGACTTCCATAGACTTTTTATTTTACTTTTTTTTTGAGGTATAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACTTCCATAGACTTTTTATTTTACTTTTTTTTTGAGGTATAAATCT  200

seq1  AATGATATGTGTTAGGACCTTACATCTAGAAAATCATCTCATGAGAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATGTGTTAGGACCTTACATCTAGAAAATCATCTCATGAGAAAAC  250

seq1  TTTTAGTTTAGATATTATTTCTAGAAAACTTGGAAGAAATACAAGCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTAGATATTATTTCTAGAAAACTTGGAAGAAATACAAGCCAGA  300

seq1  AATTCTGTTATGATTAAAAGTTGAATCCGAAAGAACCTGCATGTCCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTTATGATTAAAAGTTGAATCCGAAAGAACCTGCATGTCCAGGT  350

seq1  GAATGATAGAGTACTGAGTTGAGATAAACTGAATGTTGGCTTTGTGCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATAGAGTACTGAGTTGAGATAAACTGAATGTTGGCTTTGTGCAAC  400

seq1  ACTGCTAAGCATGCAATCCCTTTTTGTGACATTTTCAGTCATTGATTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTAAGCATGCAATCCCTTTTTGTGACATTTTCAGTCATTGATTCTC  450

seq1  TTCATAGATTGCTATTTCTCAGGAGTTATTAGAGATAAGAATAATTCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGATTGCTATTTCTCAGGAGTTATTAGAGATAAGAATAATTCATA  500

seq1  CTCCTCCCACAGTGCCAATGTCAAAGACCAATGTAATTCTCTACATGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCACAGTGCCAATGTCAAAGACCAATGTAATTCTCTACATGCCT  550

seq1  TTATTTATATATATATATATATATATATATATATATATTTATATAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATATATATATATATATATATATATATATATATTTATATAATTTT  600

seq1  TGGACGGGGGTGTTGTTGAGACAGGG-TTTCTCTGTGTAGCTCTGGCTGT  649
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TGGACGGGGGTGTTGTTGAGACAGGGTTTTCTCTGTGTAGATCTGGCTGT  650

seq1  CCTGGAA  656
       ||||||
seq2  ACTGGAA  657


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