BAC Information

Click to search

BAC

Clone NameB6Ng01-314I08
Chromosome7 (Build37)
Map Location 15,601,224 - 15,602,021
singlet/doubletsinglet
Overlap genenone
Upstream geneEG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677
Downstream geneLOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3, LOC100042771, Obox5, EG638338, Obox6, Crx, Crxos1, Sepw1, Gltscr2, Ehd2, Gltscr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314I08.bB6Ng01-314I08.g
ACCGA105428GA105429
length1,166919
definitionB6Ng01-314I08.b B6Ng01-314I08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcctgaatgggtgttggattttt
caaatgctttctctgcatttatggctaagataaaaaattcaggggacagc
agatgctggggaggatgtggagaaagaggaactctcctccattgttggtg
ggcttacatgcttgtacaaacactctagaaatcagtctggcggttcctca
gaaaattggacacagtactactggaggatcctgcaatacctctcctgggc
atatatccagaagatgttccagccagtaagaaacacacatgctccactat
gttcatagcagccttatttttaatagccagaagctggaaagaacccagat
gtccctcaacaggggaatgtatacagaaaatgtggtacatttacagaatg
gagaactactcagatactaaagaccatgaattgaagaaattcttaggcaa
atggatggatctggaggatatcatcctgagtgagacaatgcaatcacaaa
agaacacatatggtatacactcattgataaggggatactagcccaggaat
tgagaatacccacgatacaacttgcaaaacatatgaaactcaagaagaag
gaagaccaaagtgtggatacttagctccttcttataattttaaacaaaat
acccatggattgattcacagtgacaaagttcagagcagatcttgaaggaa
tgaccatccagagactgccctactggggggatacacgccataaaccacta
ccaaacccagacactaggcagatgccaccaagaacctgctgacaggagcc
tatatagctgtttccagtgaggctgtgccagtgcctggcaaatacagaag
tgggatgctcacagttatccactggactgagcacaagttccccaattaaa
ggagcccaaagaaatacccaaggagctgaatgggactgagtccccataga
agaaaacacaatatgaactaatagtactctcagagctcctttggaccctt
gtctcatcaggattctattctgtcaccagacattcaatgaacagaaacta
ggttgggtaggacatggttattcgcttacactccattactgctggttatt
cacaaagggaagtcagcttgaactcaaacagtcaagtaagacagggagcc
tggaatgtgcatagaa
gaattctaggcactggtctgagggctgtgttttataaaaagcctgagtca
ttagatggagaggcttgacaagaggagatttaaactgtggggtttctctg
atttatttccctttaaatgggcaagcaggactaggatgaacacacaataa
gatctccagtggacttgggaccaaagtgagctctggggtggccaaaatag
accatggtggtggtatattgactggaaagtgtgacaacttgtcagcttta
tgactaaaaaggtcctcattcaacaagaagaggtaatcatattgggtttg
tggagcacacattttaccccagttctccggacccattggcagtgggactc
cgtgatattgagggctggcttgttattatagtgggatccagaaagtgagg
gacatgtacaattgccagtctcaattttgaaaaagaaaaaaggaaaaaag
ggagagagagagagagagagagagagagagagagagagagaagaaaggaa
aggaaaggaaaggaaaggaaagaagagaaaagaaaagaaaataaagacaa
gaaaagaaaagagaggatgactcgagccccaggctaccttgccagcagag
tcttgcccaacacccgcaagggcccacacgggactccccacgggacccta
agacctctggtgagtggaacacagcgcctgccccaatccaatcgtgggga
acttgagactgcggtacatagggaagcaggctacccgggcttgatctggg
gcacaaaccccttccgctccactcgagccccgggctaccttgccagctga
gtcgcctgacacccgcaaagggcccacacgggactccccacgggatccta
agacctctggtgagtgggaacacagcgcctgccccaatccaatcgcgggg
aacttgagactgcggtaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15601224_15602021
seq2: B6Ng01-314I08.g_67_864

seq1  GAATTCTAGGCACTGGTCTGAGGGCTGTGTTTTATAAAAAGCCTGAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCACTGGTCTGAGGGCTGTGTTTTATAAAAAGCCTGAGTCA  50

seq1  TTAGATGGAGAGGCTTGACAAGAGGAGATTTAAACTGTGGGGTTTCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGGAGAGGCTTGACAAGAGGAGATTTAAACTGTGGGGTTTCTCTG  100

seq1  ATTTATTTCCCTTTAAATGGGCAAGCAGGACTAGGATGAACACACAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTCCCTTTAAATGGGCAAGCAGGACTAGGATGAACACACAATAA  150

seq1  GATCTCCAGTGGACTTGGGACCAAAGTGAGCTCTGGGGTGGCCAAAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCAGTGGACTTGGGACCAAAGTGAGCTCTGGGGTGGCCAAAATAG  200

seq1  ACCATGGTGGTGGTATATTGACTGGAAAGTGTGACAACTTGTCAGCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTGGTGGTATATTGACTGGAAAGTGTGACAACTTGTCAGCTTTA  250

seq1  TGACTAAAAAGGTCCTCATTCAACAAGAAGAGGTAATCATATTGGGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAAAAGGTCCTCATTCAACAAGAAGAGGTAATCATATTGGGTTTG  300

seq1  TGGAGCACACATTTTACCCCAGTTCTCCGGACCCATTGGCAGTGGGACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCACACATTTTACCCCAGTTCTCCGGACCCATTGGCAGTGGGACTC  350

seq1  CGTGATATTGAGGGCTGGCTTGTTATTATAGTGGGATCCAGAAAGTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATATTGAGGGCTGGCTTGTTATTATAGTGGGATCCAGAAAGTGAGG  400

seq1  GACATGTACAATTGCCAGTCTCAATTTTGAAAAAGAAAAAAGGAAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTACAATTGCCAGTCTCAATTTTGAAAAAGAAAAAAGGAAAAAAG  450

seq1  GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAAGGAA  500

seq1  AGGAAAGGAAAGGAAAGGAAAGAAGAGAAAAGAAAAGAAAATAAAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGAAAGGAAAGGAAAGAAGAGAAAAGAAAAGAAAATAAAGACAA  550

seq1  GAAAAGAAAAGAGAGGATGACTCGAGCCCCAGGCTACCTTGCCAGCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAAGAGAGGATGACTCGAGCCCCAGGCTACCTTGCCAGCAGAG  600

seq1  TCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGGGACCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGGGACCCTA  650

seq1  AGACCTCTGGTGAGTGGAACACAGCGCCTGCCCCAATCCAATCGTGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCTGGTGAGTGGAACACAGCGCCTGCCCCAATCCAATCGTGGGGA  700

seq1  ACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCTTGATCTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCTTGATCTGGG  750

seq1  GCACAAACCCCTTCCGCTCCACTCGAGCCCCGGGCTACCTTGCCAGCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAACCCCTTCCGCTCCACTCGAGCCCCGGGCTACCTTGCCAGCT  798