BAC Information

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BAC

Clone NameB6Ng01-314I13
Chromosome7 (Build37)
Map Location 75,846,353 - 76,007,110
singlet/doubletdoublet
Overlap geneArrdc4
Upstream geneTtc23, Dmn, LOC665319, LOC100041771, Igf1r, C330024D12Rik, EG434197, LOC100041800, EG384639
Downstream geneLOC384741, EG665410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314I13.bB6Ng01-314I13.g
ACCGA105438GA105439
length2321,114
definitionB6Ng01-314I13.b B6Ng01-314I13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,846,353 - 75,846,584)(76,005,992 - 76,007,110)
sequence
aggtcagtcaagatgaaatgctaaataacagttaccataactacacatgt
tggcacacacctgcaagtcaccatttaggagtctgaagcaagagaattga
aagttcaaggctaaccacagtgagtttaaggcttctaggccacacagtca
gagcctgttttatcaaaaataagaggaggaggagaatgagaagcaacagg
aggagaagggaggaagaggatgggggggagga
gaattcccttcctgccaagtattaggcgtgcagctagagaacagtggctt
ccctttggggttctcagtcccctggtgcatgttccactctgctttcagtt
gctctgataaagaccatgatcaaaggcaacttagggaggaaagggttcat
ttggcttacatggtcatggtcacaggccgtcactgagggaactcagggaa
gcaattcaaacaggaatctgaaagcagtgaccatgggggaaagctattta
actggcttattctccaaggcttgctcagccttcttgcttatacacccagg
ggtcacctgctcagtagtgaaactatccacagtagacaaggccgtccctc
atcaggaaaatgcatttggtattggtgttctcttccttgaggaagacttt
cttccactctcagcatcccttacttgtttgttcttctgtgtgtagggttg
agtcctcctaggctccccacacccaccccagccatccaccttaacctacc
tattgctgttttcctcattcaacacatttttaagcagttatgttagtaga
ttttatggatgtagcttctgacatttttaggagacacaatgtcacagcaa
actccctgttctctggcacttaaaatcattctgcctccctcttccaaaat
tatccctaagccttagcctgtatcctagatatttccactgggagtgggct
ccatgactgcattttgattggttgtggtcttctgtaaggtctccatctgt
tgaaaagagaagtttccttgattagggatctgactgatatgactgcataa
acaggagaagaacaagcacagtagacatactgaagtagatcgaaaagccc
acaaggcctcaatcctataaagaactttagataaactaaaggaatgctgg
gagtgaaagaaatacactttgcccatgtatgctaagaataaagaaataaa
aataaatgtctctctaagaaataaatcagtgtcctaagtgcctttgacta
cattacgttcttatcggaaccatcaaaaaaagaaagtaaattgggagata
agagacttgaacctaggccatgattgtccttttggccctatgggtggcca
tgatacctccaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_75846353_75846584
seq2: B6Ng01-314I13.b_50_281

seq1  AGGTCAGTCAAGATGAAATGCTAAATAACAGTTACCATAACTACACATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGTCAAGATGAAATGCTAAATAACAGTTACCATAACTACACATGT  50

seq1  TGGCACACACCTGCAAGTCACCATTTAGGAGTCTGAAGCAAGAGAATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACACACCTGCAAGTCACCATTTAGGAGTCTGAAGCAAGAGAATTGA  100

seq1  AAGTTCAAGGCTAACCACAGTGAGTTTAAGGCTTCTAGGCCACACAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAAGGCTAACCACAGTGAGTTTAAGGCTTCTAGGCCACACAGTCA  150

seq1  GAGCCTGTTTTATCAAAAATAAGAGGAGGAGGAGAATGAGAAGCAACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGTTTTATCAAAAATAAGAGGAGGAGGAGAATGAGAAGCAACAGG  200

seq1  AGGAGAAGGGAGGAAGAGGATGGGGGGGAGGA  232
      ||||||||||||||||||||||||||||||||
seq2  AGGAGAAGGGAGGAAGAGGATGGGGGGGAGGA  232

seq1: chr7_76005992_76007110
seq2: B6Ng01-314I13.g_66_1179 (reverse)

seq1  CATTGGAAGTATCATGCCCACCATTAGGGGCAAAAGGGACAAACCATGGG  50
      ||||||| |||||||| |||||  ||||| ||||| |||| || ||||| 
seq2  CATTGGAGGTATCATGGCCACCCATAGGGCCAAAA-GGAC-AATCATGG-  47

seq1  CCCTAGGTTCAAGTTCCTCTTATCTCCCAA-TTACTTTC--TTTTTGATG  97
       |||||||||||||  |||||||||||||| ||||||||  |||||||||
seq2  -CCTAGGTTCAAGT--CTCTTATCTCCCAATTTACTTTCTTTTTTTGATG  94

seq1  GTTTCCGATAAGAACGTAATGTAGTCAAAGGCACTTTAGGACACTGATTT  147
      | |||||||||||||||||||||||||||||||| |||||||||||||||
seq2  G-TTCCGATAAGAACGTAATGTAGTCAAAGGCAC-TTAGGACACTGATTT  142

seq1  ATTTCTTTAGAGAGACATTTTATTTTTATTTCTTTATTCTTAGCATACAT  197
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTTC-TTAGAGAGACA-TTTATTTTTATTTCTTTATTCTTAGCATACAT  190

seq1  GGGC-AAGTGTATTTCTTTCACTCCCAGCATTCC-TTAGTTTATCTAAAG  245
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGGCAAAGTGTATTTCTTTCACTCCCAGCATTCCTTTAGTTTATCTAAAG  240

seq1  TTCTTTATAGGATTGAGGCCTTGTGGGCTTTTCGATCTACTTCAGTATGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATAGGATTGAGGCCTTGTGGGCTTTTCGATCTACTTCAGTATGT  290

seq1  CTACTGTGCTTGTTCTTCTCCTGTTTATGCAGTCATATCAGTCAGATCCC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTGCTTGTTCTTCTCCTGTTTATGCAGTCATATCAGTCAGATCCC  340

seq1  TAATCAAGGAAACTTCTCTTTTCAACAGATGGAGACCTTACAGAAGACCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAGGAAACTTCTCTTTTCAACAGATGGAGACCTTACAGAAGACCA  390

seq1  CAACCAATCAAAATGCAGTCATGGAGCCCACTCCCAGTGGAAATATCTAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAATCAAAATGCAGTCATGGAGCCCACTCCCAGTGGAAATATCTAG  440

seq1  GATACAGGCTAAGGCTTAGGGATAATTTTGGAAGAGGGAGGCAGAATGAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGGCTAAGGCTTAGGGATAATTTTGGAAGAGGGAGGCAGAATGAT  490

seq1  TTTAAGTGCCAGAGAACAGGGAGTTTGCTGTGACATTGTGTCTCCTAAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTGCCAGAGAACAGGGAGTTTGCTGTGACATTGTGTCTCCTAAAA  540

seq1  ATGTCAGAAGCTACATCCATAAAATCTACTAACATAACTGCTTAAAAATG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGAAGCTACATCCATAAAATCTACTAACATAACTGCTTAAAAATG  590

seq1  TGTTGAATGAGGAAAACAGCAATAGGTAGGTTAAGGTGGATGGCTGGGGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAATGAGGAAAACAGCAATAGGTAGGTTAAGGTGGATGGCTGGGGT  640

seq1  GGGTGTGGGGAGCCTAGGAGGACTCAACCCTACACACAGAAGAACAAACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGGGAGCCTAGGAGGACTCAACCCTACACACAGAAGAACAAACA  690

seq1  AGTAAGGGATGCTGAGAGTGGAAGAAAGTCTTCCTCAAGGAAGAGAACAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGGATGCTGAGAGTGGAAGAAAGTCTTCCTCAAGGAAGAGAACAC  740

seq1  CAATACCAAATGCATTTTCCTGATGAGGGACGGCCTTGTCTACTGTGGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCAAATGCATTTTCCTGATGAGGGACGGCCTTGTCTACTGTGGAT  790

seq1  AGTTTCACTACTGAGCAGGTGACCCCTGGGTGTATAAGCAAGAAGGCTGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCACTACTGAGCAGGTGACCCCTGGGTGTATAAGCAAGAAGGCTGA  840

seq1  GCAAGCCTTGGAGAATAAGCCAGTTAAATAGCTTTCCCCCATGGTCACTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCCTTGGAGAATAAGCCAGTTAAATAGCTTTCCCCCATGGTCACTG  890

seq1  CTTTCAGATTCCTGTTTGAATTGCTTCCCTGAGTTCCCTCAGTGACGGCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGATTCCTGTTTGAATTGCTTCCCTGAGTTCCCTCAGTGACGGCC  940

seq1  TGTGACCATGACCATGTAAGCCAAATGAACCCTTTCCTCCCTAAGTTGCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCATGACCATGTAAGCCAAATGAACCCTTTCCTCCCTAAGTTGCC  990

seq1  TTTGATCATGGTCTTTATCAGAGCAACTGAAAGCAGAGTGGAACATGCAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCATGGTCTTTATCAGAGCAACTGAAAGCAGAGTGGAACATGCAC  1040

seq1  CAGGGGACTGAGAACCCCAAAGGGAAGCCACTGTTCTCTAGCTGCACGCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGACTGAGAACCCCAAAGGGAAGCCACTGTTCTCTAGCTGCACGCC  1090

seq1  TAATACTTGGCAGGAAGGGAATTC  1119
      ||||||||||||||||||||||||
seq2  TAATACTTGGCAGGAAGGGAATTC  1114