BAC Information

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BAC

Clone NameB6Ng01-315M16
Chromosome7 (Build37)
Map Location 131,339,334 - 131,340,359
singlet/doubletsinglet
Overlap geneEG628779
Upstream geneSlc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482
Downstream geneEG545999
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315M16.bB6Ng01-315M16.g
ACCGA106347GA106348
length1,0371,142
definitionB6Ng01-315M16.b B6Ng01-315M16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgggttaataaatggagagcatcttgtacagcctctggtgtggagttgat
aaataaatgttagctcctattataaattccttaaaatatgaattcctcct
ctcatcaaatatggattgaactcctcttgagtagcagaccctgagctgag
taaaatatgcttcctacctcttaataactcacagtcagttgagtttgaca
gatacataggtcaataattagaaaactttctgacagatttagtggtggat
atagaaagtggcgagaccaggggaatgactcaacctgtctgtggggagat
agccgagtagctggggatggcagaagaatataatctaattgggacaggta
aagtctggattatcaaaatgtttcagctgccacaggaggatgaaatgcaa
acaggtgggcctggggataacatgaacggagatagccagagtgagagcat
ggaagttattaaataggccagatatgaaaggaacagggtctgcatgaagg
aaggtgtagatacagaggagtaggcttttggggactctgtaattatggct
tgggaggggcatcctggggaaattaaaaaaaagatattctcacactcccc
ctcatactttgatgcttcctgtgagtatgcataagcaagaccctggatga
tcatagggtcagtgaatcgtgggaagagcacagatcaggtggtaagagta
aggaagcacttggatatgaacgacagagtcccttaaatccaacacatact
ggagttagattcttcagaagtgaggagggttatagtacttgtaaatgttc
cccccccacacacaccttgaaattaatgtaaagtagcattgtaagagggg
gcagacttttgatttctccttgagcctttggggtgacagctctagaatgt
tactgagctatatcttcagtcgatcagagctgggttcactactttatcgc
taaagccataggctggatggatgaaagggcagagctggataaatccctca
ggaatagctgatgtctgaactggtaagtgctgactca
gaattctccattgcctaccagaaatggtctaaagagaatgggccctgaat
ggaaggaaaacagcgtacaaagcaaagactacaaagagaccagggtgctg
ctcagacctaggattcggggtgggggtgggggactgtgacaaaatacctg
tcttgtgtgagatggcctgtaaacaagggctctggctgattgtcatcatg
agggagacagcttctctctggcacatctgctgaagtttcaaaaaagggaa
cgaatgcttacatgatgtatatttcctcccaacaatccctctcccgttcc
atgtgaccattcctactctgaagagttctgggaggaaggatggtggttgg
attaggttaagggatatccaagtagaggtagccaaattctgtctaggact
gggtcaatgatgacaacccaatgtcatgaagaaagttgatgacataaaat
tcatgctcaataggattacgctgaggcccaaccagggcgacagagtcaca
agaggtccgttgactccttggggggctcttgggtgacttccctgaagtcc
tcagatgctcttgccctgtttcccatgagaggaaatatggatatctaggg
tgcacattggttggcaaacactgcatgccaacaagcacctagtcccacaa
tggaaccttgggcatttctgcaaggatcgcaccttgctcatgacaatgtc
ttttctggtgttttgcagtcatctcacatgccaccttggaaggcagagaa
acacagataatcaggtaagtggtcagaacatggtaaagcctccacatcca
ggtgacctcccccttcatgattggctttcaattctcagccagtcggtcct
tttggaatttggggataacaaaatggtatgcaagataccaaaaggagctc
gatttaaggctatgttctcgatgttacatcccctggtttgtaacgtttta
aggaatgtgttcacttcctatatgttttttctaattttgacctactctca
tggagagaggaggatggacattttgaatatggcatctcatacttgatgct
aacattcatgcaatactcagagagacaacatgctcaaggtcctataggac
tctcctaggcagtatgtccaagttaacacgaaccttctcgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_131339334_131340359
seq2: B6Ng01-315M16.b_51_1087

seq1  TGGGTTAATAAATGGAAAGCATCTTGTACAGCCTCTGGTGTGGAGTTGAT  50
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGGTTAATAAATGGAGAGCATCTTGTACAGCCTCTGGTGTGGAGTTGAT  50

seq1  AAATAAATGTTAGCTCCTATTATAAATTCCTTAAAATATGAATTCCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGTTAGCTCCTATTATAAATTCCTTAAAATATGAATTCCTCCT  100

seq1  CTCATCAAATATGGATTGAACTCCTCTTGAGTAGCAGACCCTGAGCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCAAATATGGATTGAACTCCTCTTGAGTAGCAGACCCTGAGCTGAG  150

seq1  TAAAATATGCTTCCTACCTCTTAATAACTCACAGTCAGTTGAGTTTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATGCTTCCTACCTCTTAATAACTCACAGTCAGTTGAGTTTGACA  200

seq1  GAGACATAGGTCAATAATTAGAAAACTTTCTGACAGATTTAGTGGTGGAT  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATAGGTCAATAATTAGAAAACTTTCTGACAGATTTAGTGGTGGAT  250

seq1  ATAGAAAGTGGCGAGACCAGGGGAATGACTCAACCTGTCTGTGGGGAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGTGGCGAGACCAGGGGAATGACTCAACCTGTCTGTGGGGAGAT  300

seq1  AGCCAAGTAGCTGGGGATGGCAGAAGAATATAGTCTAATTGGGACAGGTA  350
      |||| ||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGCCGAGTAGCTGGGGATGGCAGAAGAATATAATCTAATTGGGACAGGTA  350

seq1  AAGTCTGGATTATCAAAATGTTTCAGCTGCCACAGGAGGATGAAATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGTCTGGATTATCAAAATGTTTCAGCTGCCACAGGAGGATGAAATGCAA  400

seq1  ACAGGTGGGCCTGGGGATAACATGAACGGTGATAGCCAGAGTGAGAGCAT  450
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACAGGTGGGCCTGGGGATAACATGAACGGAGATAGCCAGAGTGAGAGCAT  450

seq1  GGAAGTTATTAAATAGGCCAGATATGAAAGGAACAGGGTCTGCATGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTATTAAATAGGCCAGATATGAAAGGAACAGGGTCTGCATGAAGG  500

seq1  AAGGTGTAGATACAGAGGAGTAGGCTTTTGGGGACTCTGTAATTATGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTAGATACAGAGGAGTAGGCTTTTGGGGACTCTGTAATTATGGCT  550

seq1  TGGGAGGGGCATCCTGGGGAAATTAAAAAAAAGATATTCTCACACTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGGGCATCCTGGGGAAATTAAAAAAAAGATATTCTCACACTCCCC  600

seq1  CTCATACTTTGATGCTTCCTGTGAGTATGCATAAGCAAGACCCTGGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACTTTGATGCTTCCTGTGAGTATGCATAAGCAAGACCCTGGATGA  650

seq1  TCATAGGGTCAGTGAATCGTGGGAAGAGCACAGATCAGGTGGTAGGAGTA  700
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCATAGGGTCAGTGAATCGTGGGAAGAGCACAGATCAGGTGGTAAGAGTA  700

seq1  AGGAAGCACTTGGATATGAACGACAGAGTCCCTTAAATCCAACACATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCACTTGGATATGAACGACAGAGTCCCTTAAATCCAACACATACT  750

seq1  GGAGTTAGATTCTTCAGAAGTGAGGAGGGTTATAGTACTTGTAAATGTT-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGAGTTAGATTCTTCAGAAGTGAGGAGGGTTATAGTACTTGTAAATGTTC  800

seq1  CCCCCCCACACACACCTTGAAATTAATGTAGAGTTAGCATTGTAAGAGGG  849
      |||||||||||||||||||||||||||||| || ||||||||||||| ||
seq2  CCCCCCCACACACACCTTGAAATTAATGTAAAG-TAGCATTGTAAGA-GG  848

seq1  GGGCAGACTTTTGATTTCTCCTTGAGCCTTTTGGGGTGACAGCTCTAGAA  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGGCAGACTTTTGATTTCTCCTTGAGCC-TTTGGGGTGACAGCTCTAGAA  897

seq1  TGTTCCTG-GCTATATCTTCAGTC-ATCAGAGCGGGTTTCACGACTTTAT  947
      |||| ||| ||||||||||||||| |||||||| || ||||| |||||||
seq2  TGTTACTGAGCTATATCTTCAGTCGATCAGAGCTGGGTTCACTACTTTAT  947

seq1  TGCCAAAGCCATA-GCTGAGTGTTT---ATGGCCGAG--TGATAAATCCC  991
       || ||||||||| ||||  ||  |   | ||| |||   ||||||||||
seq2  CGCTAAAGCCATAGGCTGGATGGATGAAAGGGCAGAGCTGGATAAATCCC  997

seq1  T--AGAAT-GCGGATTTCT-TACTGG-AAGTGCTGACTCA  1026
      |   |||| || ||| |||  ||||| |||||||||||||
seq2  TCAGGAATAGCTGATGTCTGAACTGGTAAGTGCTGACTCA  1037