BAC Information

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BAC

Clone NameB6Ng01-316E07
Chromosome7 (Build37)
Map Location 57,362,490 - 57,363,104
singlet/doubletsinglet
Overlap geneNell1
Upstream gene9130015G15Rik, 5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5
Downstream gene4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316E07.bB6Ng01-316E07.g
ACCGA106705GA106706
length402612
definitionB6Ng01-316E07.b B6Ng01-316E07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atttgaacattcagaggtagatcaggggaggttgagaaaaccctaactga
gatcaggaagagttgattgattgattgattgattggttggttgtttagtt
agttggttggttacttgcttggttagttgtgggagaggaacagagatagc
tcagtgagtaaggcacttgccaggaaagcctggggggatgagttccctcc
ccagcacccagatcaaagttgagtgcagcagttgtctataaccttagtgc
aagggagatgaagacagatctcttatgttcattagccaagctatctgatt
caaggggagattctatctcaaaaataagatgaaaatgggggaagaagaca
ctgacatgagcctctggccccgaaatacatacagaggcgggggggggggg
ag

gaattctcactttgagacttgattatctggccagagatcccaggcatttt
gaaaagacatacctaaattataatttcaaagcttaaaggtcaaaaataca
tatacttgcacttagagtgttccaatttctgttaatgtctgaaaaatggt
tcccaaacttttaatgcttctgggttctctgggttaaggatttggacata
gcccaaaggagaaggcttcttggtgcttcatgacatttgtggctccagct
gtggggattaggtggtgggggaagtgatctagaggagcttccatgctgct
ttatatcagctattggctgatgtcccagtttctgtgccaagaagagcatc
tggctgatgcctccttggtgtggcttgggcttcctccaagctcggtgccc
tcaggattcttaggtttcttagctggtgactgggggcttcaagcacaatt
attctggtacacgggatcaaaacttacctcttgaatttgtcaccaagcaa
tacaaagtcctccaggtcctatgttattcttttcattctgagagatagag
agttgtcagatcgcttatgagatgggcatgtgatatatggattttgtggt
cacccttgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_57362490_57363104
seq2: B6Ng01-316E07.g_71_682

seq1  GAATTCTCACTTTGAGACTTGATTATCTGGCCAGAGATCCCAGGCATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTTTGAGACTTGATTATCTGGCCAGAGATCCCAGGCATTTT  50

seq1  GAAAAGACATACCTAAATTATAATTTCAAAGCTTAAAGGTCAAAAATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACATACCTAAATTATAATTTCAAAGCTTAAAGGTCAAAAATACA  100

seq1  TATACTTGCACTTAGAGTGTTCCAATTTCTGTTAATGTCTGAAAAATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTGCACTTAGAGTGTTCCAATTTCTGTTAATGTCTGAAAAATGGT  150

seq1  TCCCAAACTTTTAATGCTTCTGGGTTCTCTGGGTTAAGGATTTGGACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACTTTTAATGCTTCTGGGTTCTCTGGGTTAAGGATTTGGACATA  200

seq1  GCCCAAAGGAGAAGGCTTCTTGGTGCTTCATGACATTTGTGGCTCCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAGGAGAAGGCTTCTTGGTGCTTCATGACATTTGTGGCTCCAGCT  250

seq1  GTGGGGATTAGGTGGTGGGGGAAGTGATCTAGAGGAGCTTCCATGCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGATTAGGTGGTGGGGGAAGTGATCTAGAGGAGCTTCCATGCTGCT  300

seq1  TTATATCAGCTATTGGCTGATGTCCCAGTTTCTGTGCCAAGAAGAGCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCAGCTATTGGCTGATGTCCCAGTTTCTGTGCCAAGAAGAGCATC  350

seq1  TGGCTGATGCCTCCTTGGTGTGGCTTGGGCTTCCTCCAAGCACGGTGCCC  400
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGGCTGATGCCTCCTTGGTGTGGCTTGGGCTTCCTCCAAGCTCGGTGCCC  400

seq1  TCAGGATTCTTAGGTTTCTTAGCAGGTGACTGGGGGCTTCAAGCACAAGT  450
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  TCAGGATTCTTAGGTTTCTTAGCTGGTGACTGGGGGCTTCAAGCACAATT  450

seq1  ATTCTGGTACACGGGATCAAAACTTACCTCTTGAATTTGTCACCAAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGTACACGGGATCAAAACTTACCTCTTGAATTTGTCACCAAGCAA  500

seq1  TACAAAGTCCCCCAGGTCCTATGTGAGTCCTTTTCATTCTGAGAGAGAGA  550
      |||||||||| ||||||||||||| | | ||||||||||||||||| |||
seq2  TACAAAGTCCTCCAGGTCCTATGTTA-TTCTTTTCATTCTGAGAGATAGA  549

seq1  GAGTTGTCAAGATCGCTTTATGAGATGGGCATGTGATATAGGGATATTGT  600
      |||||||| ||||||| ||||||||||||||||||||||| |||| ||||
seq2  GAGTTGTC-AGATCGC-TTATGAGATGGGCATGTGATATATGGATTTTGT  597

seq1  GGTCACCCTTGGGAA  615
      |||||||||||||||
seq2  GGTCACCCTTGGGAA  612


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