BAC Information

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BAC

Clone NameB6Ng01-316N08
Chromosome7 (Build37)
Map Location 32,957,640 - 32,958,159
singlet/doubletsinglet
Overlap geneEG668371
Upstream geneLOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740
Downstream geneEG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316N08.bB6Ng01-316N08.g
ACCGA107130GA107131
length5201,180
definitionB6Ng01-316N08.b B6Ng01-316N08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagaactaaggaatctgggcttttgttaattcaattttaata
ggagctgtttcttgtatatcttggatatcttccgaagaaatgacacagaa
cccttctatttatttaatcaagcattatagcagaaaaagtgggcagccat
tgatctgctctatttctttaagctaaactgtctaccttccaataacattc
cccaagatacttacttttatttgggtggggggaggtggtgccgcaaactt
tattgatagtattcaagagagtagggagggctccctaggcccctcgtgtt
atggggggtctggggtgaaatttgtgagggagatgctctgtgttggcggt
caagttgggatagggactcctctgcaactgagggcctctctcttgctctc
aatgtccttgctggggtgggtggtccaagctttcttactccatggaggcc
ttgtggaccaagaggtacattttcctgttgttgtggctctaaaacaagtc
ataccaggaaatgaccttga
gaattcaggggaggaagtaaagtagaggatgaggcaggaaaattctttct
ggcttgctctgtattgtttgttcagcctacttatttgtacaacctagaac
aacctgtccaagtgtaggaacacaaacccacagtgtgttgggctcaccca
tattaatcattaatcaagaagatgcccttgttaaagagcataccttttct
ctgatgtatactatgggcatcttaattaaatatgggatagctatagtggt
gtggatttctatccacatcctctgtcctacctcagtgccctacatgactg
tttctagggtaattccgaagtgttcttttcactatggatctgtggcatat
tttgagatcaggaatagtgatacatccagacatatcactagttcacgaac
ttcattgccatttatgtttccatttgaattttagggtgtcttttttaatt
tctgtaaagaataatgcaggcattatgctgacaattgaattttcacaata
tttaccctttcagtccctgagcatgggaagtcttttcatcttcttctgtc
tttctccattttgctctgttttaaagcttgtattgcaagcttgcattcca
cttccttagtttgttttattccaaggcattgtgatagtcttggggtgatt
ttgaatatggaaacttttctggttccttttcccctcagtatgtctttcat
gggtatataaaaaggtactcatttttgtaggtttattttatattctgccc
ctctggaagcaccacttttgaaagtatttatctctatgtgtttcttttgg
ggtccaggtgttgcctcacaaaccacatacacacggatctcagtcagaca
aggatagtatattgagctttattggttgatcaaaggatgcagaccagatt
gaggagctatctctgacaatgaggcagatcctttcatagcttttaagcct
tgcaatccaataaaacatctgtgccactatctccaccaatcagatcaagg
gatagacccttcctaaaaaccatatcctttgttgtacattatctgctctc
atgccttgggatgtggaatgtggagcagtcttgctaacctaaactatatg
tcctaacttcaatcagaattcttaccatacacaatgtctttctccctata
gtagtatatgccacagttcccaggccatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32957640_32958159
seq2: B6Ng01-316N08.b_45_564 (reverse)

seq1  TCAAGCTCATTTCCTGGTATGACAATGAATAGAGGTACAACAACAGGGTA  50
      ||||| |||||||||||||||||      |||||  |||||||||||  |
seq2  TCAAGGTCATTTCCTGGTATGACTTGTTTTAGAGCCACAACAACAGGAAA  50

seq1  GTGGACCTCATGGCCTACATGGCCTCCAAGGTGTAAGAAAACCTGGACCA  100
       || ||||| ||| | ||| |||||||| || |||||||| | |||||||
seq2  ATGTACCTCTTGGTCCACAAGGCCTCCATGGAGTAAGAAAGCTTGGACCA  100

seq1  CCCACCCCAGCAAGGACACTGAGAGCAAGAGAGAGGCCCTCAGTTGCTGA  150
      |||||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  CCCACCCCAGCAAGGACATTGAGAGCAAGAGAGAGGCCCTCAGTTGCAGA  150

seq1  GGAGTCCCTATCCCAACTTGACCGCCAACACAGAGCATCTCCCTCACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCCTATCCCAACTTGACCGCCAACACAGAGCATCTCCCTCACAAA  200

seq1  TTTCACCCCAGACCCCCCATAACACGAGGGGCCTAGGGAGCCCTCCCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCCCAGACCCCCCATAACACGAGGGGCCTAGGGAGCCCTCCCTAC  250

seq1  TCTCTTGAATACTATCAATAAAGTTTGCGGCACCACCTCCCCCCACCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGAATACTATCAATAAAGTTTGCGGCACCACCTCCCCCCACCCAA  300

seq1  ATAAAAGTAAGTATCTTGGGGAATGTTATTGGAAGGTAGACAGTTTAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTAAGTATCTTGGGGAATGTTATTGGAAGGTAGACAGTTTAGCT  350

seq1  TAAAGAAATAGAGCAGATCAATGGCTGCCCACTTTTTCTGCTATAATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATAGAGCAGATCAATGGCTGCCCACTTTTTCTGCTATAATGCT  400

seq1  TGATTAAATAAATAGAAGGGTTCTGTGTCATTTCTTCGGAAGATATCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAATAAATAGAAGGGTTCTGTGTCATTTCTTCGGAAGATATCCAA  450

seq1  GATATACAAGAAACAGCTCCTATTAAAATTGAATTAACAAAAGCCCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACAAGAAACAGCTCCTATTAAAATTGAATTAACAAAAGCCCAGAT  500

seq1  TCCTTAGTTCTGAAGAATTC  520
      ||||||||||||||||||||
seq2  TCCTTAGTTCTGAAGAATTC  520