BAC Information

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BAC

Clone NameB6Ng01-317P11
Chromosome7 (Build37)
Map Location 113,382,900 - 113,384,059
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660
Downstream geneLOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317P11.bB6Ng01-317P11.g
ACCGA107976GA107977
length1,2171,146
definitionB6Ng01-317P11.b B6Ng01-317P11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagctaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcacactaaa
atcagggactagagaaggctgcccactttctccctacctattcaacatta
tacttgaagtcctagccagagcaatttgacaacaaaaggagatcaagcgg
atacaaattggaaaggaagaggacaaactatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacaggttcaatgaagtagctggatataaaataaactcaaacaaa
tcaatggcctttctgtacacaaaggatatacaggctgagaaagaaattag
ggaaacaacaccctactcaatactcacaaataatataaaataccttgttg
tgactctaactaaggaagtgaaagatctgtatgataagaacttcaagtct
ctgaagaaagaaattaaagatctcagaagatggaaagatctcccatgctc
atggaatggcaggatcaatataggataaatggctatcttgccaaaagcaa
tctacagattcaatgcaatccccatcaaaattccaactcaattcttcaat
gaattagaaaggacaaaccgcaacttcatctgaaataacaaaaaacctag
gatagcaaaaactctgctcaaggataaaaaaacctctggtggaatcacaa
tgcctgacctaaagctgtactacagagcaattgtgataaaaactgcatgg
tactggtatagtgacagacaagtagaacaatggaatagaattgaagaccc
aggaatgaactcacacacctatggtcacttgatctttgacaagatagcta
aaaccatccagtggaaaaaagacagcattttcatggaaaggagttacaga
gacaaagtttggcactgagacgaaagaatggaccatctagagactgccat
atctggggatccatcccataaccaggttccaaacgatgacaccattgcat
acactagcagtttttgctgaaagacaccagaatatagctgtctcttgtga
gaactagtcagctagcaaacacagaagtgatgcctcatagtcagtcttga
atggatccagcccaatggagactagagaaaggtacccacgggagccttaa
ggaatttggccaacccc
gaattccaagcccttgatcttggtaaaggacgttctaggagtgttggaac
actggctggcggaaggctttagccatgtcagaattcaattttaaaaagca
cttataataggaaaatactgaaagagagcacatggatccatacactagac
taacgtggtaatggaacacgggaatgaaaaattaatgtattggtaaagaa
cgctagactccaggaggagagcttccttgaaactcttttgcctcatgagt
gacttttaagcctttcggcttgtccagctgactggaccggagagcatagc
aatcatacaactgtttacagggggtggggagaatgcccaaggacagaaaa
gaactaagttagacaatgttggcaaagaaaacaatgggtatctcatacac
agctgcctatagtctaataactacagctcagggggaatagttaggttccc
agaagctgccaaatttaaaacctctggagaggctccagccatagaccagc
ctcaccactcctgaacaagaacacagaactaaagtttctctttctgcttt
catcaaagcctctgagaaagtcttgagtcagtctggtcccccgaattcag
taaagatctcttgatgcccacacagagggtctctcacatagaggttgaag
tgtgctttaaaatcacaatacataataacagtttttaaaaaagactgctg
acactagcaagtatgtttggagtgctgtcactaattctgcattgtagtcc
tgaaaaggtcagggctatagttttcccttctccttcttgtccagatgtgt
agtttgaataacttagagaaagatatgaatgggagagagataagagaggt
ccaaagaaatttcaacctagttactgaatttaagacttaaatgttcttat
atctaggctaacaacaatttctcatccaaattcctattcaaaaaactcca
agggtttgtctactagtggaattttttgtaagtctctcccaagaatatgt
cttactaaatatagattgatcttgcagggcaaacgccatcaacatacagc
tctagcatgcaaatgtgtagtgttgctacatagtctacattgccctgctg
atgtctgacctcttaaggcccttagcatgatctgtgcctgactatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113382900_113384059
seq2: B6Ng01-317P11.g_66_1211 (reverse)

seq1  AATAGTCAGGCACAGAACAGTGCTATAGGGCTTAAAAGAGGTCAGACACT  50
      |||||||||||||||| || |||||  || |||  ||||||||||||| |
seq2  AATAGTCAGGCACAGATCA-TGCTAAGGGCCTT--AAGAGGTCAGACA-T  46

seq1  CAGCCAGGGGCAATGTAGACTATGTAGCAACACCTAACACATTTGCATGC  100
      ||||   ||||||||||||||||||||||||||   ||||||||||||||
seq2  CAGC--AGGGCAATGTAGACTATGTAGCAACAC--TACACATTTGCATGC  92

seq1  TAGAGGCTTGGTATTGGTGATTGGCGTTTGCCCTGCAGATTCAATCTATA  150
      |||| |||  ||| || ||| ||||||||||||||||   ||||||||||
seq2  TAGA-GCT--GTA-TGTTGA-TGGCGTTTGCCCTGCAAGATCAATCTATA  137

seq1  TTTAGTTAAGACATATTCTTGGGAGAGACTTACAAAAAATTCCCACTAGT  200
      ||||| ||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTAG-TAAGACATATTCTTGGGAGAGACTTACAAAAAATT-CCACTAGT  185

seq1  AGACAAACCCTTGGAGTTTTTTGAATAGGAATTTGGATGAGAAATTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAACCCTTGGAGTTTTTTGAATAGGAATTTGGATGAGAAATTGTTG  235

seq1  TTAGCCTAGATATAAGAACATTTAAGTCTT-AATTCAGTAACTAGGTTGA  299
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTAGCCTAGATATAAGAACATTTAAGTCTTAAATTCAGTAACTAGGTTGA  285

seq1  AATTTCTTTGGACCTCTCTTATCTCTCTCCCATTCATATCTTTCTCTAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTTGGACCTCTCTTATCTCTCTCCCATTCATATCTTTCTCTAAG  335

seq1  TTATTCAAACTACACATCTGGACAAGAAGGAGAAGGGAAAACTATAGCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAAACTACACATCTGGACAAGAAGGAGAAGGGAAAACTATAGCCC  385

seq1  TGACCTTTTCAGGACTACAATGCAGAATTAGTGACAGCACTCCAAACATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTTTCAGGACTACAATGCAGAATTAGTGACAGCACTCCAAACATA  435

seq1  CTTGCTAGTGTCAGCAGTCTTTTTTAAAAACTGTTATTATGTATTGTGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAGTGTCAGCAGTCTTTTTTAAAAACTGTTATTATGTATTGTGAT  485

seq1  TTTAAAGCACACTTCAACCTCTATGTGAGAGACCCTCTGTGTGGGCATCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCACACTTCAACCTCTATGTGAGAGACCCTCTGTGTGGGCATCA  535

seq1  AGAGATCTTTACTGAATTCGGGGGACCAGACTGACTCAAGACTTTCTCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCTTTACTGAATTCGGGGGACCAGACTGACTCAAGACTTTCTCAG  585

seq1  AGGCTTTGATGAAAGCAGAAAGAGAAACTTTAGTTCTGTGTTCTTGTTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGATGAAAGCAGAAAGAGAAACTTTAGTTCTGTGTTCTTGTTCA  635

seq1  GGAGTGGTGAGGCTGGTCTATGGCTGGAGCCTCTCCAGAGGTTTTAAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGTGAGGCTGGTCTATGGCTGGAGCCTCTCCAGAGGTTTTAAATT  685

seq1  TGGCAGCTTCTGGGAACCTAACTATTCCCCCTGAGCTGTAGTTATTAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTTCTGGGAACCTAACTATTCCCCCTGAGCTGTAGTTATTAGAC  735

seq1  TATAGGCAGCTGTGTATGAGATACCCATTGTTTTCTTTGCCAACATTGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCAGCTGTGTATGAGATACCCATTGTTTTCTTTGCCAACATTGTC  785

seq1  TAACTTAGTTCTTTTCTGTCCTTGGGCATTCTCCCCACCCCCTGTAAACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAGTTCTTTTCTGTCCTTGGGCATTCTCCCCACCCCCTGTAAACA  835

seq1  GTTGTATGATTGCTATGCTCTCCGGTCCAGTCAGCTGGACAAGCCGAAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATGATTGCTATGCTCTCCGGTCCAGTCAGCTGGACAAGCCGAAAG  885

seq1  GCTTAAAAGTCACTCATGAGGCAAAAGAGTTTCAAGGAAGCTCTCCTCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAAGTCACTCATGAGGCAAAAGAGTTTCAAGGAAGCTCTCCTCCT  935

seq1  GGAGTCTAGCGTTCTTTACCAATACATTAATTTTTCATTCCCGTGTTCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTAGCGTTCTTTACCAATACATTAATTTTTCATTCCCGTGTTCCA  985

seq1  TTACCACGTTAGTCTAGTGTATGGATCCATGTGCTCTCTTTCAGTATTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACGTTAGTCTAGTGTATGGATCCATGTGCTCTCTTTCAGTATTTT  1035

seq1  CCTATTATAAGTGCTTTTTAAAATTGAATTCTGACATGGCTAAAGCCTTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTATAAGTGCTTTTTAAAATTGAATTCTGACATGGCTAAAGCCTTC  1085

seq1  CGCCAGCCAGTGTTCCAACACTCCTAGAACGTCCTTTACCAAGATCAAGG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGCCAGTGTTCCAACACTCCTAGAACGTCCTTTACCAAGATCAAGG  1135

seq1  GCTTGGAATTC  1160
      |||||||||||
seq2  GCTTGGAATTC  1146