BAC Information

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BAC

Clone NameB6Ng01-321L06
Chromosome7 (Build37)
Map Location 109,133,313 - 109,268,650
singlet/doubletdoublet
Overlap geneNuma1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10
Upstream geneP2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222
Downstream geneNup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321L06.bB6Ng01-321L06.g
ACCGA110739GA110740
length1,108727
definitionB6Ng01-321L06.b B6Ng01-321L06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,267,538 - 109,268,650)(109,133,313 - 109,134,038)
sequence
gaattcttttccacacccagcgttctggctctcaccccatgccagcatct
aacctccaccactgcgatccttttgtaccgtgactgtttgacagacatct
ggcatatgactgactgaccttccttacagatttgtccctcaagtagattt
ctcagtaacggtggattttggagtcaaaagagagttggaccttgttcttt
ggtaaatttaagatagaagggctgtctgccatagaggtagagatcttcaa
ggcctttactcatgccctgtgtatcctttggacaccatactatcatgcgc
agtggccccaagccaccgagaaccagtctgagaagctccagattcgctca
ggcccttgatcatcagtcgtcgtcgtcttcgatttgccagaggagtttag
atgaagaatgtcaaggatgttcctccctgccctcccatctagccaagaac
atttccaagaagataaaactgtcactgagacaggtctggatgcgccctag
gggcaaatagagaaggcctttaccacattgctgctggctataggaagtcc
caggtactagcctgaaacagctgatatttggggctgtcacagacaatatg
gccaccccttggtctttatgcatgaagattatgtaaaggtttttattaaa
aaatatatatatatatataaatgatctagattattttcctctttctgaag
tactttcttaaaaaaataaaattaaatgtttatagtattcctggtggtat
tgactttctctttgtgtttttggagactctgagaagaaaccgatcctaag
ttaaagagcgagcgaggggctgaggagtgagttcagagggtcagagcact
aaccacacaagtctgacaatccaagttagttctcagactcctgataaagc
aagctgtgttgttagcacacatctgtaatcccagtgcgctgtatgtgcct
ggcagcactctcatggatacatgtttacgtgtattttgatcatatccatc
acctcccactctgaaatttccagcattctggtttgtttgtctttgttctg
gacttatatattttatgtgtattgggttgctgatgtttcaccacttacaa
aggtgagt
gaattcataaaccgtattcattaaacatgctccttaccttaaaacagtct
ttttagaagcttgttgttgaatacagttagcagtcatggctaatacagtc
atgtgtaagtgccaggagggagctgagacaggtggggagggaatcggggg
gcggagcaaggaaatgggaggggctcagagggttgagtgctgttttgaca
agaatttcaatcctgtgtgtctctgggtggacctagagatgtgtcagaga
gaagctcagggtcagaggagggatgtccgtcttccacaagatgggacacc
caaaagggtgtagggaggctgcttgataccagcacaaccttgtgatagac
tccatgcgctgagagacagagcaggcagctctgctgaggcagaagagaca
aattgttatagtaggtgaaggggaagccgctgaagaggtggactttgaaa
ttggagttgaatatggtaggtggcaggagccagcagcagtgatctgaccc
ggaagggtcaagcatgagcagcttgattcagccaggagggacaggacttg
ctggagggttaagtgtccctcccagatttcaagtgtaagtgatggcacag
agaaactatgaaaccaggctgctttgtgggcagaaagaaagattcataga
ggaccaaacagccaaggtcattaagatttctgttgctgtgaaagagacac
catgactacagcaagtcatcccccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109267538_109268650
seq2: B6Ng01-321L06.b_44_1151 (reverse)

seq1  ACTCA-CTTTGT-AGTGGTGAATACATACAGGCAAACCACAATACACATA  48
      ||||| |||||| ||||||||| |||| || ||||  | |||||||||||
seq2  ACTCACCTTTGTAAGTGGTGAA-ACAT-CA-GCAA--CCCAATACACATA  45

seq1  AAATATTAATAAATTCAG-ACAAAGACAAAACAAAACCAGAATGCTGGAA  97
      ||||||  |||| | ||| |||||||||||   |||||||||||||||||
seq2  AAATAT--ATAAGTCCAGAACAAAGACAAA--CAAACCAGAATGCTGGAA  91

seq1  A-TTCAGAGTGGGA-GTGATGGATATGATCAAAATACACGTAAACATGTA  145
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAGTGGGAGGTGATGGATATGATCAAAATACACGTAAACATGTA  141

seq1  TCCATGAGAGTGCTGCCAGGCACATACAGCGCACTGGGATTACAGATGTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGAGAGTGCTGCCAGGCACATACAGCGCACTGGGATTACAGATGTG  191

seq1  TGCTAACAACACAGCTTGCTTTATCAGGAGTCTGAGAACTAAACTTGGAT  245
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCTAACAACACAGCTTGCTTTATCAGGAGTCTGAGAACT-AACTTGGAT  240

seq1  TGTCAGACTTGTGTGGTTAGTGCTCTGACCCTCTGAACTCACTCCTCAGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGACTTGTGTGGTTAGTGCTCTGACCCTCTGAACTCACTCCTCAGC  290

seq1  CCCTCGCTCGCTCTTTAACTTAGGATCGGTTTCTTCTCAGAGTCTCCAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGCTCGCTCTTTAACTTAGGATCGGTTTCTTCTCAGAGTCTCCAAA  340

seq1  AACACAAAGAGAAAGTCAATACCACCAGGAATACTATAAACATTTAATTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAAGAGAAAGTCAATACCACCAGGAATACTATAAACATTTAATTT  390

seq1  TATTTTTTTAAGAAAGTACTTCAGAAAGAGGAAAATAATCTAGATCATTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTAAGAAAGTACTTCAGAAAGAGGAAAATAATCTAGATCATTT  440

seq1  ATATATATATATATATTTTTTAATAAAAACCTTTACATAATCTTCATGCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATTTTTTAATAAAAACCTTTACATAATCTTCATGCA  490

seq1  TAAAGACCAAGGGGTGGCCATATTGTCTGTGACAGCCCCAAATATCAGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACCAAGGGGTGGCCATATTGTCTGTGACAGCCCCAAATATCAGCT  540

seq1  GTTTCAGGCTAGTACCTGGGACTTCCTATAGCCAGCAGCAATGTGGTAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGCTAGTACCTGGGACTTCCTATAGCCAGCAGCAATGTGGTAAA  590

seq1  GGCCTTCTCTATTTGCCCCTAGGGCGCATCCAGACCTGTCTCAGTGACAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTCTATTTGCCCCTAGGGCGCATCCAGACCTGTCTCAGTGACAG  640

seq1  TTTTATCTTCTTGGAAATGTTCTTGGCTAGATGGGAGGGCAGGGAGGAAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTTCTTGGAAATGTTCTTGGCTAGATGGGAGGGCAGGGAGGAAC  690

seq1  ATCCTTGACATTCTTCATCTAAACTCCTCTGGCAAATCGAAGACGACGAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGACATTCTTCATCTAAACTCCTCTGGCAAATCGAAGACGACGAC  740

seq1  GACTGATGATCAAGGGCCTGAGCGAATCTGGAGCTTCTCAGACTGGTTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGATGATCAAGGGCCTGAGCGAATCTGGAGCTTCTCAGACTGGTTCT  790

seq1  CGGTGGCTTGGGGCCACTGCGCATGATAGTATGGTGTCCAAAGGATACAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGCTTGGGGCCACTGCGCATGATAGTATGGTGTCCAAAGGATACAC  840

seq1  AGGGCATGAGTAAAGGCCTTGAAGATCTCTACCTCTATGGCAGACAGCCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGAGTAAAGGCCTTGAAGATCTCTACCTCTATGGCAGACAGCCC  890

seq1  TTCTATCTTAAATTTACCAAAGAACAAGGTCCAACTCTCTTTTGACTCCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTTAAATTTACCAAAGAACAAGGTCCAACTCTCTTTTGACTCCA  940

seq1  AAATCCACCGTTACTGAGAAATCTACTTGAGGGACAAATCTGTAAGGAAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACCGTTACTGAGAAATCTACTTGAGGGACAAATCTGTAAGGAAG  990

seq1  GTCAGTCAGTCATATGCCAGATGTCTGTCAAACAGTCACGGTACAAAAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCAGTCATATGCCAGATGTCTGTCAAACAGTCACGGTACAAAAGG  1040

seq1  ATCGCAGTGGTGGAGGTTAGATGCTGGCATGGGGTGAGAGCCAGAACGCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCAGTGGTGGAGGTTAGATGCTGGCATGGGGTGAGAGCCAGAACGCT  1090

seq1  GGGTGTGGAAAAGAATTC  1113
      ||||||||||||||||||
seq2  GGGTGTGGAAAAGAATTC  1108

seq1: chr7_109133313_109134038
seq2: B6Ng01-321L06.g_66_792

seq1  GAATTCATAAACCGTATTCATTAAACATGCTCCTTACCTTAAAACAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAACCGTATTCATTAAACATGCTCCTTACCTTAAAACAGTCT  50

seq1  TTTTAGAAGCTTGTTGTTGAATACAGTTAGCAGTCATGGCTAATACAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAAGCTTGTTGTTGAATACAGTTAGCAGTCATGGCTAATACAGTC  100

seq1  ATGTGTAAGTGCCAGGAGGGAGCTGAGACAGGTGGGGAGGGAATCGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAAGTGCCAGGAGGGAGCTGAGACAGGTGGGGAGGGAATCGGGGG  150

seq1  GCGGAGCAAGGAAATGGGAGGGGCTCAGAGGGTTGAGTGCTGTTTTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGCAAGGAAATGGGAGGGGCTCAGAGGGTTGAGTGCTGTTTTGACA  200

seq1  AGAATTTCAATCCTGTGTGTCTCTGGGTGGACCTAGAGATGTGTCAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCAATCCTGTGTGTCTCTGGGTGGACCTAGAGATGTGTCAGAGA  250

seq1  GAAGCTCAGGGTCAGAGGAGGGATGTCCGTCTTCCACAAGATGGGACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCAGGGTCAGAGGAGGGATGTCCGTCTTCCACAAGATGGGACACC  300

seq1  CAAAAGGGTGTAGGGAGGCTGCTTGATACCAGCACAACCTTGTGATAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGGTGTAGGGAGGCTGCTTGATACCAGCACAACCTTGTGATAGAC  350

seq1  TCCATGCGCTGAGAGACAGAGCAGGCAGCTCTGCTGAGGCAGAAGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCGCTGAGAGACAGAGCAGGCAGCTCTGCTGAGGCAGAAGAGACA  400

seq1  AATTGTTATAGTAGGTGAAGGGGAAGCCGCTGAAGAGGTGGACTTTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTATAGTAGGTGAAGGGGAAGCCGCTGAAGAGGTGGACTTTGAAA  450

seq1  TTGGAGTTGAATATGGTAGGTGGCAGGAGCCAGCAGCAGTGATCTGACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTTGAATATGGTAGGTGGCAGGAGCCAGCAGCAGTGATCTGACCC  500

seq1  GGAAGGGTCAAGCATGAGCAGCTTGATTCAGCCAGGAGGGACAGGACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGTCAAGCATGAGCAGCTTGATTCAGCCAGGAGGGACAGGACTTG  550

seq1  CTGGAGGGTTAAGTGTCCCTCCCAGATTTCAAGTGTAAGTGATGGCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGGTTAAGTGTCCCTCCCAGATTTCAAGTGTAAGTGATGGCACAG  600

seq1  AGAAACTATGAAACCAGGCTGCTTTGTGGGCAGAAAGAAAGATTCATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTATGAAACCAGGCTGCTTTGTGGGCAGAAAGAAAGATTCATAGA  650

seq1  GGACCAAACAGCCAAGGTCATTAAGATTTCTGTTGCTGTG-AAGAGACAC  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGACCAAACAGCCAAGGTCATTAAGATTTCTGTTGCTGTGAAAGAGACAC  700

seq1  CATGACTACAGCAAGTCATCCCCCCCC  726
      |||||||||||||||||||||||||||
seq2  CATGACTACAGCAAGTCATCCCCCCCC  727