BAC Information

Click to search

BAC

Clone NameB6Ng01-321O12
Chromosome7 (Build37)
Map Location 107,955,747 - 108,088,495
singlet/doubletdoublet
Overlap geneB930006L02Rik, Tnfrsf19l, Arhgef17, P2ry6
Upstream geneNeu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, LOC100041204
Downstream geneP2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321O12.bB6Ng01-321O12.g
ACCGA110890GA110891
length2151,197
definitionB6Ng01-321O12.b B6Ng01-321O12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,955,747 - 107,955,961)(108,087,290 - 108,088,495)
sequence
cagcctgtacaactctccaacaggactggctgctggagaggttcttagca
tcccgtttggaaaggtcccagttttacttgggaggcagacagaggcaggt
ggatttctgttagtttgaggttagcctggtctacagatcgagttccagga
tggtcaaggctagagagaaactgtctctccataaaaagaaaatgaaaggc
agggggagggaggga
gaattcagactgaggacgtcagtgcttccctccgtgagctctgcgtgtgt
gtgcactgtccacaggggtaaactaaaagccaccagagctctctgtcctg
gacccaacctgccttgaaaacaacgaggaacaccaaatctggcacttcct
cctaaaacatcttccatcttgcatgagacaggtaaacataccattactgc
atccctactcctcagggagctcaggagatgccccatgtgtgcttctaacc
tttctgctcagattgggaagccagaaggtaaatccctgcccccaagatca
tgcaggcactaagtacctgtgatttgaacggaagcccatcaatgaattct
catagaagagacatttgactagagttctgagggctgagcagaacttcatg
aggagaagctgagaggaaataaataggacagaaaaaaatcgacttgggcc
agggtggtgccacaggcctttcatcccagcacttgggaggcagagtcagg
ggagctctgtgatttccaggccagcctgatctacagagtgagcttcaggg
cagccaaggctacacagagaaaccctgtgtctaaaaaataaacaaaagcg
aatttctctcaagctttagctttactggagtacacaggtccatgatatga
catcagtatggatctttatggggtgatgaggctaagagatgacataatta
aagacataattgttcagacagtgagatgaaggcgcggggcgaaagaacgg
ggttgccagtgagcatgctactgaaagggtgtgtattgcttccccagact
ctccgagcataggaaaggctgacaggcagttatggagcaggacaatggca
ccatccaggctccaggcttgccgcccaccacctgcgtctaccgtgaggat
ttcaagcgactgctgctaaccccggtatactcgtggtgctggtggtcggc
ctgccactgaacatctgcgtcattgcccagatctgcgcatcccgccgacc
ctgacccgttcgctgtgtacaccctgaacctggcactggcgactgatgta
tgcctgtcactacccctacttatcataacttacgcaggagggaaccactg
gcctcgaaacctcgctgccgcatgtaggcttccctctatgccaattcatg
ggcacatctgtatcctcacccttgccattagcttccagagccgctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107955747_107955961
seq2: B6Ng01-321O12.b_50_264

seq1  CAGCCTGTACAACTCTCCAACAGGACTGGCTGCTGGAGAGGTTCTTAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTACAACTCTCCAACAGGACTGGCTGCTGGAGAGGTTCTTAGCA  50

seq1  TCCCGTTTGGAAAGGTCCCAGTTTTACTTGGGAGGCAGACAGAGGCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTTTGGAAAGGTCCCAGTTTTACTTGGGAGGCAGACAGAGGCAGGT  100

seq1  GGATTTCTGTTAGTTTGAGGTTAGCCTGGTCTACAGATCGAGTTCCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTGTTAGTTTGAGGTTAGCCTGGTCTACAGATCGAGTTCCAGGA  150

seq1  TGGTCAAGGCTAGAGAGAAACTGTCTCTCCATAAAAAGAAAATGAAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAGGCTAGAGAGAAACTGTCTCTCCATAAAAAGAAAATGAAAGGC  200

seq1  AGGGGGAGGGAGGGA  215
      |||||||||||||||
seq2  AGGGGGAGGGAGGGA  215

seq1: chr7_108087290_108088495
seq2: B6Ng01-321O12.g_67_1263 (reverse)

seq1  GTAGCG---CTGGAAGCTAAT-GCA--GGTGAGGA-ACAGGATGCTGCCA  43
      ||||||   |||||||||||| |||  |||||||| ||| ||||   |||
seq2  GTAGCGGCTCTGGAAGCTAATGGCAAGGGTGAGGATACA-GATGTGCCCA  49

seq1  TGTAGATTGGCATAGAAGAGGAAGCGTACAAAGCGGCAGGCGAGGTCTCC  93
      ||   |||||||||||   |||||| ||| | |||||| ||||||| | |
seq2  TG--AATTGGCATAGA--GGGAAGCCTAC-ATGCGGCA-GCGAGGT-TTC  92

seq1  GAAGGGCCAGTGGTCCCCTCTGGCGT-AGTTATAGATAAGTAGGGGTAGT  142
      ||  |||||||||| |||||  |||| |||||| ||||||||||||||||
seq2  GA--GGCCAGTGGTTCCCTCCTGCGTAAGTTAT-GATAAGTAGGGGTAGT  139

seq1  GAACAGGCATACATCAGGTCCGCCAGTGCCAGGTTCAGGGTGTACACAGC  192
      | |||||||||||||||   ||||||||||||||||||||||||||||||
seq2  G-ACAGGCATACATCAG--TCGCCAGTGCCAGGTTCAGGGTGTACACAGC  186

seq1  GGAACGGGTCAGGGTCCGGCGGGATGCGCAGATCTGGGCAATGACGCAGA  242
       |||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  -GAACGGGTCAGGGT-CGGCGGGATGCGCAGATCTGGGCAATGACGCAGA  234

seq1  TGTTCAGTGGCAGGCCGACCACCAGCACCACCGAGTATACCGGGGTTAGC  292
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGTTCAGTGGCAGGCCGACCACCAGCACCA-CGAGTATACCGGGGTTAGC  283

seq1  AGCAGTCGCTTGAAATCCTCACGGTAGACGCAGGTGGTGGGCGGCAAGCC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCGCTTGAAATCCTCACGGTAGACGCAGGTGGTGGGCGGCAAGCC  333

seq1  TGGAGCCTGGATGGTGCCATTGTCCTGCTCCATAACTGCCTGTCAGCCTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCTGGATGGTGCCATTGTCCTGCTCCATAACTGCCTGTCAGCCTT  383

seq1  TCCTATGCTCGGAGAGTCTGGGGAAGCAATACACACCCTTTCAGTAGCAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGCTCGGAGAGTCTGGGGAAGCAATACACACCCTTTCAGTAGCAT  433

seq1  GCTCACTGGCAACCCCGTTCTTTCGCCCCGCGCCTTCATCTCACTGTCTG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGGCAACCCCGTTCTTTCGCCCCGCGCCTTCATCTCACTGTCTG  483

seq1  AACAATTATGTCTTTAATTATGTCATCTCTTAGCCTCATCACCCCATAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTATGTCTTTAATTATGTCATCTCTTAGCCTCATCACCCCATAAA  533

seq1  GATCCATACTGATGTCATATCATGGACCTGTGTACTCCAGTAAAGCTAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATACTGATGTCATATCATGGACCTGTGTACTCCAGTAAAGCTAAA  583

seq1  GCTTGAGAGAAATTCGCTTTTGTTTATTTTTTAGACACAGGGTTTCTCTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGAGAAATTCGCTTTTGTTTATTTTTTAGACACAGGGTTTCTCTG  633

seq1  TGTAGCCTTGGCTGCCCTGAAGCTCACTCTGTAGATCAGGCTGGCCTGGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCTTGGCTGCCCTGAAGCTCACTCTGTAGATCAGGCTGGCCTGGA  683

seq1  AATCACAGAGCTCCCCTGACTCTGCCTCCCAAGTGCTGGGATGAAAGGCC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGAGCTCCCCTGACTCTGCCTCCCAAGTGCTGGGATGAAAGGCC  733

seq1  TGTGGCACCACCCTGGCCCAAGTCGATTTTTTTCTGTCCTATTTATTTCC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCACCACCCTGGCCCAAGTCGATTTTTTTCTGTCCTATTTATTTCC  783

seq1  TCTCAGCTTCTCCTCATGAAGTTCTGCTCAGCCCTCAGAACTCTAGTCAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTTCTCCTCATGAAGTTCTGCTCAGCCCTCAGAACTCTAGTCAA  833

seq1  ATGTCTCTTCTATGAGAATTCATTGATGGGCTTCCGTTCAAATCACAGGT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCTTCTATGAGAATTCATTGATGGGCTTCCGTTCAAATCACAGGT  883

seq1  ACTTAGTGCCTGCATGATCTTGGGGGCAGGGATTTACCTTCTGGCTTCCC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTGCCTGCATGATCTTGGGGGCAGGGATTTACCTTCTGGCTTCCC  933

seq1  AATCTGAGCAGAAAGGTTAGAAGCACACATGGGGCATCTCCTGAGCTCCC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAGCAGAAAGGTTAGAAGCACACATGGGGCATCTCCTGAGCTCCC  983

seq1  TGAGGAGTAGGGATGCAGTAATGGTATGTTTACCTGTCTCATGCAAGATG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGTAGGGATGCAGTAATGGTATGTTTACCTGTCTCATGCAAGATG  1033

seq1  GAAGATGTTTTAGGAGGAAGTGCCAGATTTGGTGTTCCTCGTTGTTTTCA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTTTTAGGAGGAAGTGCCAGATTTGGTGTTCCTCGTTGTTTTCA  1083

seq1  AGGCAGGTTGGGTCCAGGACAGAGAGCTCTGGTGGCTTTTAGTTTACCCC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGTTGGGTCCAGGACAGAGAGCTCTGGTGGCTTTTAGTTTACCCC  1133

seq1  TGTGGACAGTGCACACACACGCAGAGCTCACGGAGGGAAGCACTGACGTC  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACAGTGCACACACACGCAGAGCTCACGGAGGGAAGCACTGACGTC  1183

seq1  CTCAGTCTGAATTC  1206
      ||||||||||||||
seq2  CTCAGTCTGAATTC  1197