BAC Information

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BAC

Clone NameB6Ng01-321P08
Chromosome7 (Build37)
Map Location 27,900,920 - 28,049,613
singlet/doubletdoublet
Overlap geneCyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl
Upstream geneLOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c, LOC100043195, Nlrp4a, Nlrp9a, V1re12, EG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199
Downstream geneLtbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321P08.bB6Ng01-321P08.g
ACCGA110930GA110931
length263533
definitionB6Ng01-321P08.b B6Ng01-321P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,049,351 - 28,049,613)(27,900,920 - 27,901,458)
sequence
gaattcacagcactggagtttaaggatgcaggggtcataaggtcatgggt
gttgagggtatgagggtcagggaagaaggtaatcgagggtaaggacatga
agctaggtggcagagtgcttgcctagcatgcaaggccagggggccaactc
caagagtaggagagagggagggacagagacagagaatgtaatgcgtgtac
gggcctctgactactaagtacagatgaagcaaggcctcaggggtggtgtg
tgttgggggtggg
tcccaacattaaggaaagagaggccaagccagataggtaagagaaaatcg
cccatcagtcctaaaccactaaatatacagaacaaggagtgtgtgcactc
aacagcagaaagtggccaggccttttatcccagtagttgggaggtagagg
cagatggatctcagagttgcagaccagcctacatagtgagttacaggtca
gacctggatgtggagaggctctgtctcaaaataagaaaaaagaaaaaaga
aaaacggcaggagaggcacaaagccaagtatggtcatcagaataacagct
gatgattcagatcaaatttcaaagttcaggacagcttagaaggatgtatt
tcaagttttaaaagaaaacaactaccaatccaaactagcaaggtttctgc
cataactgaggacaatggaaagacaggccaaaggaattcatagttgtcaa
acaggaaaggaactcaactgtatttttgtggtctttttgtttcattttgc
tttggggaggtttgggaggcttggggcgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_28049351_28049613
seq2: B6Ng01-321P08.b_46_308 (reverse)

seq1  CCCACCCCCAACACACACCACCCCTGAGGCCTTGCTTCATCTGTACTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCAACACACACCACCCCTGAGGCCTTGCTTCATCTGTACTTAG  50

seq1  TAGTCAGAGGCCCGTACACGCATTACATTCTCTGTCTCTGTCCCTCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGAGGCCCGTACACGCATTACATTCTCTGTCTCTGTCCCTCCCTC  100

seq1  TCTCCTACTCTTGGAGTTGGCCCCCTGGCCTTGCATGCTAGGCAAGCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACTCTTGGAGTTGGCCCCCTGGCCTTGCATGCTAGGCAAGCACT  150

seq1  CTGCCACCTAGCTTCATGTCCTTACCCTCGATTACCTTCTTCCCTGACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACCTAGCTTCATGTCCTTACCCTCGATTACCTTCTTCCCTGACCC  200

seq1  TCATACCCTCAACACCCATGACCTTATGACCCCTGCATCCTTAAACTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCCTCAACACCCATGACCTTATGACCCCTGCATCCTTAAACTCCA  250

seq1  GTGCTGTGAATTC  263
      |||||||||||||
seq2  GTGCTGTGAATTC  263

seq1: chr7_27900920_27901458
seq2: B6Ng01-321P08.g_69_607

seq1  GAATTCTCCCAACATTAAGGAAAGAGAGGCCAAGCCAGATAGGTAAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCAACATTAAGGAAAGAGAGGCCAAGCCAGATAGGTAAGAGA  50

seq1  AAATCGCCCATCAGTCCTAAACCACTAAATATACAGAACAAGGAGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGCCCATCAGTCCTAAACCACTAAATATACAGAACAAGGAGTGTGT  100

seq1  GCACTCAACAGCAGAAAGTGGCCAGGCCTTTTATCCCAGTAGTTGGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAACAGCAGAAAGTGGCCAGGCCTTTTATCCCAGTAGTTGGGAGG  150

seq1  TAGAGGCAGATGGATCTCAGAGTTGCAGACCAGCCTACATAGTGAGTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCAGATGGATCTCAGAGTTGCAGACCAGCCTACATAGTGAGTTAC  200

seq1  AGGTCAGACCTGGATGTGGAGAGGCTCTGTCTCAAAATAAGAAAAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGACCTGGATGTGGAGAGGCTCTGTCTCAAAATAAGAAAAAAGAA  250

seq1  AAAAGAAAAACGGCAGGAGAGGCACAAAGCCAAGTATGGTCATCAGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAACGGCAGGAGAGGCACAAAGCCAAGTATGGTCATCAGAATA  300

seq1  ACAGCTGATGATTCAGATCAAATTTCAAAGTTCAGGACAGCTTAGAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGATGATTCAGATCAAATTTCAAAGTTCAGGACAGCTTAGAAGGA  350

seq1  TGTATTTCAAGTTTTAAAAGAAAACAACTACCAATCCAAACTAGCAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCAAGTTTTAAAAGAAAACAACTACCAATCCAAACTAGCAAGGT  400

seq1  TTCTGCCATAACTGAGGACAATGGAAAGACAGGCCAAAGGAATTCATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCATAACTGAGGACAATGGAAAGACAGGCCAAAGGAATTCATAGT  450

seq1  TGTCAAACAGGAAAGGAACTCAACTGTATTTTTGTGGTCTTTTTGTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAACAGGAAAGGAACTCAACTGTATTTTTGTGGTCTTTTTGTTTCA  500

seq1  TTTTGCTTTGGGGAGGTTTGGGAGGCTTGGGGCGGGGGG  539
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTGGGGAGGTTTGGGAGGCTTGGGGCGGGGGG  539