BAC Information

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BAC

Clone NameB6Ng01-323B05
Chromosome7 (Build37)
Map Location 149,857,438 - 150,043,126
singlet/doubletdoublet
Overlap geneIns2, EG640264, EG624121
Upstream geneLOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as
Downstream geneTh, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323B05.bB6Ng01-323B05.g
ACCGA111750GA111751
length1,1821,098
definitionB6Ng01-323B05.b B6Ng01-323B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,041,950 - 150,043,126)(149,857,438 - 149,858,538)
sequence
gaattctagtgtgctggagcaaggcaaaccactgccagagcctcctcata
ctgtctctgggttcatattcatgttctttccaagcatcatgtgtcctctc
acctgtatcagcttcagcaaaacagttatgatgtaatcgagtctccagaa
atttccagttcaagagggattttctctttgggcttggaggaacccaggta
aaataggattctgggaaagagagctaaggagccctcttctgtttgaaaga
gctcaagggaaaggtagactagtaaggcagaatgacacagatgcaaagag
ttatacagagctagtagtttcactgtagagtcaagttcataaaaatatct
tgtatatagctcagaaaataaagttacttcactaaactagtaggattttt
acctcacttaataactcctgtgtctttttaagtataaatactgaataact
taaatggttacactgacactgtttaagactttccccaaagacacaagctt
tctcccagggtctcgctggggcctcagggtttcacatgttatcacattgc
cctacagctttccaaagttgtttctgggtcttaatgcctgacacaggttc
tctttagagcctatgcccaaggtttcaatggggccttcaattttccttat
gttttcatggaatcaagaaagccatcaccagattttcggtgggtctgaac
actcatgttctcattgtgacctaaaacattccacatgttctcagtgtggc
taaagtccatcttcaaagtcttattgagactttctgctttccctaagttc
ttgatagaacataaagaatttttttttaagatttattttatttattatat
gtaagtacactgtagctgctttaagacacaccagaagagggaatcaagtc
ttattacagatggttgtgagccaacatgtggttgctgggaattgaactca
ggacctccagaggagcagtcagtgctcttaaccgctgagccatctcctcc
agcctgaacataaagaatcttacaggttctcctctgtgccttaggctttt
ccaagtttcttgttatttagacttcctgaaaaacttcaacaaggcctaag
gctttccaaggctcttctcaatggtcttaaaggccttcacaggtgaactg
taactaaaacaattgtgtggaatctcttattg
gaattcccctcataataggcccagagctatttattttattttattttatt
gtattttattttaaacactgattgtttaaggaagggaagaatgcaggcaa
caagtgcccatggaggagtaactaaaccatagtgccactgaggcaagaat
ggggcacaaagtatcagtgagttagagtttgaagggcatagcccttcaaa
attttatttcatgttccatggacacagtctaggggacacaggaggaaggg
accattaaagaaaagaacaaatattgaggtgtaactatgaagacacagca
cagaaaaaacaataaaatgaaactactctcttgaggcttgggtggagagt
catctaattcaggggatctgcctggactctcatttatggaaaacaaagct
gaagtacctctagaaatccacagcacccagtttttcttcctggactgcta
aagtgacctcatgctgaatctgatagatatatctttaattacaatccaca
atctaaagttatcactgcagggatctgggggtactcagggaagggaagtg
gtaagaggcaaagctgtaattctctcccctacagagagaaggccttctat
agcatcatggtataagtgatttctgtagccttgtacttgggactgaggat
ccccctcccttgtcctatcaggcattctttcctttgcatatcggtgggat
gtacaagggtggattaaacactgttcttaatcctcattggcttctccacc
attctgcacctgaaaagggaatttgcaaatccggctcgagcttgacatct
ggtggtcatttaagagattgcactgactcttcagaacatgcctctttccc
aacaatccctaactataagtgctttaccaagcccttgagaatggaaagaa
gaggaaggaatgtgttagggctgggagacgtaatttcagtggtagagatc
ttgcaagcatgtgctcatccatagcacaggaaaccacacaacacactacc
aactacactacgactatcatcatcacaacaatcttctatcctaccctcac
atttgtccctatccatgccacactggatttcttccccttggctgactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_150041950_150043126
seq2: B6Ng01-323B05.b_49_1230 (reverse)

seq1  CAATAAGA-AT--CACA-AAATGTTTTAGGCTCCAGTGTCAACCTGTGAA  46
      |||||||| ||  |||| || ||||||| | | |||| || |||||||||
seq2  CAATAAGAGATTCCACACAATTGTTTTA-GTTACAGT-TC-ACCTGTGAA  47

seq1  GGGCCTTAGGACCCAT--GGAGAGCCTTGGAAAGGCCTTAGGCCTTGTTG  94
      || | ||| ||||  |  | ||||||||||||| ||||||||||||||||
seq2  GGCCTTTAAGACCATTGAGAAGAGCCTTGGAAA-GCCTTAGGCCTTGTTG  96

seq1  -AGTTTTTCAGGAAGTCCTTAAATAAC-AGAAACTTTGAAAAGCCTTAAG  142
       ||||||||||||||||  |||||||| |||||||| |||||||| ||||
seq2  AAGTTTTTCAGGAAGTC--TAAATAACAAGAAACTTGGAAAAGCC-TAAG  143

seq1  GCACAGA-GAGAACCTGTAAGATTCTTTATGTTCAGGCTGGA-GAGATGG  190
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  GCACAGAGGAGAACCTGTAAGATTCTTTATGTTCAGGCTGGAGGAGATGG  193

seq1  CTCAGCGGTTAAGAGCACTGACTGCTCCTCTGGAGGTCCTGAGTTCAATT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCGGTTAAGAGCACTGACTGCTCCTCTGGAGGTCCTGAGTTCAATT  243

seq1  CCCAGCAACCACATGTTGGCTCACAACCATCTGTAATAAGACTTGATTCC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAACCACATGTTGGCTCACAACCATCTGTAATAAGACTTGATTCC  293

seq1  CTCTTCTGGTGTGTCTTAAAGCAGCTACAGTGTACTTACATATAATAAAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGGTGTGTCTTAAAGCAGCTACAGTGTACTTACATATAATAAAT  343

seq1  AAAATAAATCTT-AAAAAAAATTCTTTATGTTCTATCAAGAACTTAGGGA  389
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATCTTAAAAAAAAATTCTTTATGTTCTATCAAGAACTTAGGGA  393

seq1  AAGCAGAAAGTCTCAATAAGACTTTGAAGATGGACTTTAGCCACACTGAG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAAAGTCTCAATAAGACTTTGAAGATGGACTTTAGCCACACTGAG  443

seq1  AACATGTGGAATGTTTTAGGTCACAATGAGAACATGAGTGTTCAGACCCA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTGGAATGTTTTAGGTCACAATGAGAACATGAGTGTTCAGACCCA  493

seq1  CCGAAAATCTGGTGATGGCTTTCTTGATTCCATGAAAACATAAGGAAAAT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAATCTGGTGATGGCTTTCTTGATTCCATGAAAACATAAGGAAAAT  543

seq1  TGAAGGCCCCATTGAAACCTTGGGCATAGGCTCTAAAGAGAACCTGTGTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCCCCATTGAAACCTTGGGCATAGGCTCTAAAGAGAACCTGTGTC  593

seq1  AGGCATTAAGACCCAGAAACAACTTTGGAAAGCTGTAGGGCAATGTGATA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTAAGACCCAGAAACAACTTTGGAAAGCTGTAGGGCAATGTGATA  643

seq1  ACATGTGAAACCCTGAGGCCCCAGCGAGACCCTGGGAGAAAGCTTGTGTC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGAAACCCTGAGGCCCCAGCGAGACCCTGGGAGAAAGCTTGTGTC  693

seq1  TTTGGGGAAAGTCTTAAACAGTGTCAGTGTAACCATTTAAGTTATTCAGT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGAAAGTCTTAAACAGTGTCAGTGTAACCATTTAAGTTATTCAGT  743

seq1  ATTTATACTTAAAAAGACACAGGAGTTATTAAGTGAGGTAAAAATCCTAC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATACTTAAAAAGACACAGGAGTTATTAAGTGAGGTAAAAATCCTAC  793

seq1  TAGTTTAGTGAAGTAACTTTATTTTCTGAGCTATATACAAGATATTTTTA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAGTGAAGTAACTTTATTTTCTGAGCTATATACAAGATATTTTTA  843

seq1  TGAACTTGACTCTACAGTGAAACTACTAGCTCTGTATAACTCTTTGCATC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTGACTCTACAGTGAAACTACTAGCTCTGTATAACTCTTTGCATC  893

seq1  TGTGTCATTCTGCCTTACTAGTCTACCTTTCCCTTGAGCTCTTTCAAACA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCATTCTGCCTTACTAGTCTACCTTTCCCTTGAGCTCTTTCAAACA  943

seq1  GAAGAGGGCTCCTTAGCTCTCTTTCCCAGAATCCTATTTTACCTGGGTTC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGGCTCCTTAGCTCTCTTTCCCAGAATCCTATTTTACCTGGGTTC  993

seq1  CTCCAAGCCCAAAGAGAAAATCCCTCTTGAACTGGAAATTTCTGGAGACT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGCCCAAAGAGAAAATCCCTCTTGAACTGGAAATTTCTGGAGACT  1043

seq1  CGATTACATCATAACTGTTTTG-TGAAGCTGATACAGGTGAGAGGACACA  1088
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CGATTACATCATAACTGTTTTGCTGAAGCTGATACAGGTGAGAGGACACA  1093

seq1  TGATGCTTGGAAAGAACATGAATATGAACCCAGAGACAGTATGAGGAGGC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTTGGAAAGAACATGAATATGAACCCAGAGACAGTATGAGGAGGC  1143

seq1  TCTGGCAGTGGTTTGCCTTGCTCCAGCACACTAGAATTC  1177
      |||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGTGGTTTGCCTTGCTCCAGCACACTAGAATTC  1182

seq1: chr7_149857438_149858538
seq2: B6Ng01-323B05.g_69_1166

seq1  GAATTCCCCTCATAATAGGCCCAGAGCTATTTATTTTATTTTATTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTCATAATAGGCCCAGAGCTATTTATTTTATTTTATTTTATT  50

seq1  GTATTTTATTTTAAACACTGATTGTTTAAGGAAGGGAAGAATGCAGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTATTTTAAACACTGATTGTTTAAGGAAGGGAAGAATGCAGGCAA  100

seq1  CAAGTGCCCATGGAGGAGTAACTAAACCATAGTGCCACTGAGGCAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCCCATGGAGGAGTAACTAAACCATAGTGCCACTGAGGCAAGAAT  150

seq1  GGGGCACAAAGTATCAGTGAGTTAGAGTTTGAAGGGCATAGCCCTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACAAAGTATCAGTGAGTTAGAGTTTGAAGGGCATAGCCCTTCAAA  200

seq1  ATTTTATTTCATGTTCCATGGACACAGTCTAGGGGACACAGGAGGAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTCATGTTCCATGGACACAGTCTAGGGGACACAGGAGGAAGGG  250

seq1  ACCATTAAAGAAAAGAACAAATATTGAGGTGTAACTATGAAGACACAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTAAAGAAAAGAACAAATATTGAGGTGTAACTATGAAGACACAGCA  300

seq1  CAGAAAAAACAATAAAATGAAACTACTCTCTTGAGGCTTGGGTGGAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAACAATAAAATGAAACTACTCTCTTGAGGCTTGGGTGGAGAGT  350

seq1  CATCTAATTCAGGGGATCTGCCTGGACTCTCATTTATGGAAAACAAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAATTCAGGGGATCTGCCTGGACTCTCATTTATGGAAAACAAAGCT  400

seq1  GAAGTACCTCTAGAAATCCACAGCACCCAGTTTTTCTTCCTGGACTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACCTCTAGAAATCCACAGCACCCAGTTTTTCTTCCTGGACTGCTA  450

seq1  AAGTGACCTCATGCTGAATCTGATAGATATATCTTTAATTACAATCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACCTCATGCTGAATCTGATAGATATATCTTTAATTACAATCCACA  500

seq1  ATCTAAAGTTATCACTGCAGGGATCTGGGGGTACTCAGGGAAGGGAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGTTATCACTGCAGGGATCTGGGGGTACTCAGGGAAGGGAAGTG  550

seq1  GTAAGAGGCAAAGCTGTAATTCTCTCCCCTACAGAGAGAAGGCCTTCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGGCAAAGCTGTAATTCTCTCCCCTACAGAGAGAAGGCCTTCTAT  600

seq1  AGCATCATGGTATAAGTGATTTCTGTAGCCTTGTACTTGGGACTGAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATGGTATAAGTGATTTCTGTAGCCTTGTACTTGGGACTGAGGAT  650

seq1  CCCCCTCCCTTGTCCTATCAGGCATTCTTTCCTTTGCATATCGGTGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCTTGTCCTATCAGGCATTCTTTCCTTTGCATATCGGTGGGAT  700

seq1  GTACAAGGGTGGATTAAACACTGTTCTTAATCCTCATTGGCTTCTCCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGGGTGGATTAAACACTGTTCTTAATCCTCATTGGCTTCTCCACC  750

seq1  ATTCTGCACCTGAAAAGGGAATTTGCAAATCCGGCTCGAGCTTGACATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCACCTGAAAAGGGAATTTGCAAATCCGGCTCGAGCTTGACATCT  800

seq1  GGTGGTCATTTAAGAGATTGCACTGACTCTTCAGAACATGCCTCTTTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTCATTTAAGAGATTGCACTGACTCTTCAGAACATGCCTCTTTCCC  850

seq1  AACAAT-CCTAACTATAAGGTGCTTTACCAAG-CCTTGAGAATGGAAAGA  898
      |||||| ||||||||||| ||||||||||||| |||||||||||||||||
seq2  AACAATCCCTAACTATAA-GTGCTTTACCAAGCCCTTGAGAATGGAAAGA  899

seq1  AGAGGAAGGAAGGTGTTAGGGCT-GGAGACGT-AGTTCAGTGGTAGAGAA  946
      ||||||||||| ||||||||||| |||||||| | ||||||||||||| |
seq2  AGAGGAAGGAATGTGTTAGGGCTGGGAGACGTAATTTCAGTGGTAGAG-A  948

seq1  TCTTGCAAGCATGTGCTCAATCCATAGCACAGGAAAACA-ACAACAACAA  995
      |||||||||||||||||| ||||||||||||||||| || ||||| ||| 
seq2  TCTTGCAAGCATGTGCTC-ATCCATAGCACAGGAAACCACACAAC-ACAC  996

seq1  CAACAACAACAACAACAACAACAACAACAACAACAACAAATCTTCTTATC  1045
       | |||| || || || ||   | || || | ||||| ||||||| ||||
seq2  TACCAACTAC-ACTACGAC--TATCATCATC-ACAAC-AATCTTC-TATC  1040

seq1  CTA-CCTCACATTTGTCCCTAACCCATG-CACACT-GATTTCTTCCCCTT  1092
      ||| |||||||||||||||| | ||||| |||||| ||||||||||||||
seq2  CTACCCTCACATTTGTCCCT-ATCCATGCCACACTGGATTTCTTCCCCTT  1089

seq1  GGCTGACTG  1101
      |||||||||
seq2  GGCTGACTG  1098