BAC Information

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BAC

Clone NameB6Ng01-323O03
Chromosome7 (Build37)
Map Location 133,918,500 - 134,118,619
singlet/doubletdoublet
Overlap geneGdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik
Upstream geneD430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3
Downstream geneCdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323O03.bB6Ng01-323O03.g
ACCGA112343GA112344
length8021,036
definitionB6Ng01-323O03.b B6Ng01-323O03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,117,818 - 134,118,619)(133,918,500 - 133,919,532)
sequence
gaattctaacttccttttcagaaattatcctgctctgaagaattcctgac
ccgaatcagcacagaacttacagacgaagcactgtttattgctcgctccc
gtttgagtcctctgcccaataaggaaaagaacacaaaagaccaagggact
cagatatctagacatggtgaacgctctccttcttcatctagagaccagtc
cctgactcactcccaaccatagctgctctccccaggaatcttctgcctcc
ttgcccatcctaggcacagtgccccttaacttctaactcattcattgtca
ctacccaggaacccccttgtccctacctgctctagccacaactcttctaa
acatggggaaagttgttcctttaactggggcctctaattccagtgttctt
cactaagacccgaggcactgacacccggtgagtgaggctctgtccttctc
ccaggagcctgtggggagagagcaagggttgacagcatcccagcagggta
gggggaagttttcaaccatgaagttctattctattccctcctgatgctcc
agttcctgattctcagcctattctgttgtcttctgtcatctccagctctg
acaaaaatcgaacccgaaccaaggcacaccttctgccatctcctcgtgaa
aaggtttgtatgaggttattcaattccaacatttccagcttcccctgtgt
gccgttccatgtgttaggagttagatgattggggggacagaatgcacggt
agagactcagccctataagaattcagggggttgtttgtttgtttgttttt
gt
gaattccttgtttgttttgagacaatgtttcactgtcaactctggctggc
ctaaaacttactatatagacctggcctaaaacttgcagagatccacctac
ctctgcatcctgagttctgagactgttcaactgcaagttcatgtaattac
atggtttatgtatttgtttttgaggcagaggcttactagctaaccccagc
gggctgctactctgtgtagcccagatggcctcccaagtgcagagttacaa
acatgcatggccacacttggctccaagatcctatacctaagttttgacag
gagctgtgtttaataaccaatttggaaatttctaaaaaagataaccatca
gctccaggacacccggttctgggaggtctgtgcagaaggaggggctgcca
cctcctggacgcgaaaggaagcttggggttggtgtttggaaactaacttg
ttttcttcctctgttcaggtgctattttggtgccttaatgaagaatcgga
ttttgaagtggccttcagcttgggagccaatggcgtcatgaccgattacc
ccacagccctgagacactacctggacaagcaggaagaagagacccagcct
cctcagcctgaggccctgtcctgtctttctcttaaaaaataaatattttc
ttgtcagtaacatagttcatggaacaaggggttggagggtcgattcggga
ggctaaaaagatggcattagcggctggggatggaagttggtggtagaagg
cttgcataccatgaatgcagctcagagttactgcaagcaagtgcacatag
catcttaggagagatcaagaaagcctgtggtgagcttaggcctaggcttt
aaccttcagtacttggaaggcagaggcagtgggattttctgtgagttata
atgcagggctaacaaagtgagactctgcccactgaccacccctgcaataa
aagcctgggggtgtcagtagcttggccacttgtttccataacattcctga
actagcagagtgcacccacacccttgtgcaagcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134117818_134118619
seq2: B6Ng01-323O03.b_49_850 (reverse)

seq1  ACAAAAACAAACAAACAAACAACCCCCTGAATTCTTATAGGGCTGAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAAACAAACAAACAACCCCCTGAATTCTTATAGGGCTGAGTCT  50

seq1  CTACCGTGCATTCTGTCCCCCCAATCATCTAACTCCTAACACATGGAACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCGTGCATTCTGTCCCCCCAATCATCTAACTCCTAACACATGGAACG  100

seq1  GCACACAGGGGAAGCTGGAAATGTTGGAATTGAATAACCTCATACAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGGGGAAGCTGGAAATGTTGGAATTGAATAACCTCATACAAACC  150

seq1  TTTTCACGAGGAGATGGCAGAAGGTGTGCCTTGGTTCGGGTTCGATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACGAGGAGATGGCAGAAGGTGTGCCTTGGTTCGGGTTCGATTTTT  200

seq1  GTCAGAGCTGGAGATGACAGAAGACAACAGAATAGGCTGAGAATCAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGCTGGAGATGACAGAAGACAACAGAATAGGCTGAGAATCAGGAA  250

seq1  CTGGAGCATCAGGAGGGAATAGAATAGAACTTCATGGTTGAAAACTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCATCAGGAGGGAATAGAATAGAACTTCATGGTTGAAAACTTCCC  300

seq1  CCTACCCTGCTGGGATGCTGTCAACCCTTGCTCTCTCCCCACAGGCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCTGCTGGGATGCTGTCAACCCTTGCTCTCTCCCCACAGGCTCCT  350

seq1  GGGAGAAGGACAGAGCCTCACTCACCGGGTGTCAGTGCCTCGGGTCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAGGACAGAGCCTCACTCACCGGGTGTCAGTGCCTCGGGTCTTAG  400

seq1  TGAAGAACACTGGAATTAGAGGCCCCAGTTAAAGGAACAACTTTCCCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACACTGGAATTAGAGGCCCCAGTTAAAGGAACAACTTTCCCCAT  450

seq1  GTTTAGAAGAGTTGTGGCTAGAGCAGGTAGGGACAAGGGGGTTCCTGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAAGAGTTGTGGCTAGAGCAGGTAGGGACAAGGGGGTTCCTGGGT  500

seq1  AGTGACAATGAATGAGTTAGAAGTTAAGGGGCACTGTGCCTAGGATGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAATGAATGAGTTAGAAGTTAAGGGGCACTGTGCCTAGGATGGGC  550

seq1  AAGGAGGCAGAAGATTCCTGGGGAGAGCAGCTATGGTTGGGAGTGAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGCAGAAGATTCCTGGGGAGAGCAGCTATGGTTGGGAGTGAGTCA  600

seq1  GGGACTGGTCTCTAGATGAAGAAGGAGAGCGTTCACCATGTCTAGATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGTCTCTAGATGAAGAAGGAGAGCGTTCACCATGTCTAGATATC  650

seq1  TGAGTCCCTTGGTCTTTTGTGTTCTTTTCCTTATTGGGCAGAGGACTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCCTTGGTCTTTTGTGTTCTTTTCCTTATTGGGCAGAGGACTCAA  700

seq1  ACGGGAGCGAGCAATAAACAGTGCTTCGTCTGTAAGTTCTGTGCTGATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGAGCGAGCAATAAACAGTGCTTCGTCTGTAAGTTCTGTGCTGATTC  750

seq1  GGGTCAGGAATTCTTCAGAGCAGGATAATTTCTGAAAAGGAAGTTAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGGAATTCTTCAGAGCAGGATAATTTCTGAAAAGGAAGTTAGAAT  800

seq1  TC  802
      ||
seq2  TC  802

seq1: chr7_133918500_133919532
seq2: B6Ng01-323O03.g_70_1105

seq1  GAATTCCTTGTTTGTTTTGAGACAATGTTTCACTGTCAACTCTGGCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTTTGTTTTGAGACAATGTTTCACTGTCAACTCTGGCTGGC  50

seq1  CTAAAACTTACTATATAGACCTGGCCTAAAACTTGCAGAGATCCACCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACTTACTATATAGACCTGGCCTAAAACTTGCAGAGATCCACCTAC  100

seq1  CTCTGCATCCTGAGTTCTGAGACTGTTCAACTGCAAGTTCATGTAATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATCCTGAGTTCTGAGACTGTTCAACTGCAAGTTCATGTAATTAC  150

seq1  ATGGTTTATGTATTTGTTTTTGAGGCAGAGGCTTACTAGCTAACCCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTATGTATTTGTTTTTGAGGCAGAGGCTTACTAGCTAACCCCAGC  200

seq1  GGGCTGCTACTCTGTGTAGCCCAGATGGCCTCCCAAGTGCAGAGTTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCTACTCTGTGTAGCCCAGATGGCCTCCCAAGTGCAGAGTTACAA  250

seq1  ACATGCATGGCCACACTTGGCTCCAAGATCCTATACCTAAGTTTTGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATGGCCACACTTGGCTCCAAGATCCTATACCTAAGTTTTGACAG  300

seq1  GAGCTGTGTTTAATAACCAATTTGGAAATTTCTAAAAAAGATAACCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTGTTTAATAACCAATTTGGAAATTTCTAAAAAAGATAACCATCA  350

seq1  GCTCCAGGACACCCGGTTCTGGGAGGTCTGTGCAGAAGGAGGGGCTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGGACACCCGGTTCTGGGAGGTCTGTGCAGAAGGAGGGGCTGCCA  400

seq1  CCTCCTGGACGCGAAAGGAAGCTTGGGGTTGGTGTTTGGAAACTAACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGACGCGAAAGGAAGCTTGGGGTTGGTGTTTGGAAACTAACTTG  450

seq1  TTTTCTTCCTCTGTTCAGGTGCTATTTTGGTGCCTTAATGAAGAATCGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCCTCTGTTCAGGTGCTATTTTGGTGCCTTAATGAAGAATCGGA  500

seq1  TTTTGAAGTGGCCTTCAGCTTGGGAGCCAATGGCGTCATGACCGATTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGTGGCCTTCAGCTTGGGAGCCAATGGCGTCATGACCGATTACC  550

seq1  CCACAGCCCTGAGACACTACCTGGACAAGCAGGAAGAAGAGACCCAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCCTGAGACACTACCTGGACAAGCAGGAAGAAGAGACCCAGCCT  600

seq1  CCTCAGCCTGAGGCCCTGTCCTGTCTTTCTCTTAAAAAATAAATATTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCCTGAGGCCCTGTCCTGTCTTTCTCTTAAAAAATAAATATTTTC  650

seq1  TTGTCAGTAACATAGTTCATGGAACAAGGGGTTGGAGGGTCGATTCGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGTAACATAGTTCATGGAACAAGGGGTTGGAGGGTCGATTCGGGA  700

seq1  GGCTAAAAAGATGGCATTAGCGGCTGGGGATGGAAGTTGGTGGTAGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAAAAGATGGCATTAGCGGCTGGGGATGGAAGTTGGTGGTAGAAGG  750

seq1  CTTGCATACCATGAATGCAGCTCAGAGTTTACTGCAAGCAAGTGCACATA  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTGCATACCATGAATGCAGCTCAGAG-TTACTGCAAGCAAGTGCACATA  799

seq1  GCATCTTAGGAGAGATCAAGAAAGCCTGTGGTGAGC-TAGGCCTAGGCTT  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCATCTTAGGAGAGATCAAGAAAGCCTGTGGTGAGCTTAGGCCTAGGCTT  849

seq1  TAACC-TCAGTACTTGGAAGGCAGAGGCAGGTGGA-TTTCTGTGAGTTAT  897
      ||||| ||||||||||||||||||||||||  ||| ||||||||||||||
seq2  TAACCTTCAGTACTTGGAAGGCAGAGGCAGTGGGATTTTCTGTGAGTTAT  899

seq1  AATGCCAGGGCT-ACAAAGTGAGACTCTGCCCACTGA-CACCCCTGCAAA  945
      |||| ||||||| |||||||||||||||||||||||| ||||||||| ||
seq2  AATG-CAGGGCTAACAAAGTGAGACTCTGCCCACTGACCACCCCTGC-AA  947

seq1  TAAAAGCCTGGGGGTGTCAGTAGGCTGGCCCACTTG-TTCCACTACATTC  994
      |||||||||||||||||||||| ||| | ||||||| |||||  ||||||
seq2  TAAAAGCCTGGGGGTGTCAGTA-GCTTGGCCACTTGTTTCCATAACATTC  996

seq1  CAGACCCAGCAGAGTGGCACCACACCC-TGTGCCAGCTTG  1033
      | || | |||||||||   |||||||| ||||| ||||||
seq2  CTGAACTAGCAGAGTGCACCCACACCCTTGTGCAAGCTTG  1036