BAC Information

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BAC

Clone NameB6Ng01-324A08
Chromosome7 (Build37)
Map Location 61,322,330 - 61,451,747
singlet/doubletdoublet
Overlap genenone
Upstream geneGm1865, LOC100040718, LOC668789
Downstream geneMrps33p, LOC622146, Luzp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324A08.bB6Ng01-324A08.g
ACCGA112445GA112446
length1,1401,166
definitionB6Ng01-324A08.b B6Ng01-324A08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,322,330 - 61,323,471)(61,450,572 - 61,451,747)
sequence
gaattccatctgacagtttatatgtctacaaatttgtaaattaaactttg
cttgcagtgactccagagacatcttaaaaaaaaagagctagaaacaacca
cgagtaataataacactgtacacagtaactagatgagcaacacaccaggg
acacaaattacacttgttttagtcatatatccaatcagtgaaacaactaa
tcaaattagagtttgaaatatacagatactgaactgagtcaaaggagaat
tgaattgcatgaagatacaatgacagttcttgacaagcagaagccaaaaa
tgtgtgacaatttctatgtttttttttccattattagtgacaatctgtcg
tgctcatataacctcactaacaagatcgttgtgtgaggtaagcacacaca
gagcaagaacaatgcctgtatagacaaagactgagcctaaggtcctgaag
caagttaagagtgcagtaccaggaaaagtaaactcaaggacaaatatcat
tcattatcaaagatggtgtcctcccttcgactcagtttttagaatattac
ttctttagtaatactctcctcccccaactcttgtgtgtgtatatgtctca
taaatttttaactcttcagactagatgaaagtagcattttctgcaagatg
attaggctgaaggcctctggactaaagagagaggaaggaagagatctttc
ccacttcagaaggaagttgagtgattcaagcacgttcagcaaggatgtaa
agcaagatatttaaaaggaggatgaatagggagcatgggctggaatcagt
caccaagctttcgaggccatcaagagaaagcaaacacaatcttttgatgt
gggatactaacagaaataaaacacccaccattatattcttcttcaatata
aagttgaaggggaagttagtgagacaggacagaatgctcagactgcattc
cctgcatgagagaaaggcatgggatgaactgtagttcacatagcatgttg
atgagaggcaggtacaggctcagccggcatggatctcagattcagcgatt
tgttacatggtctgatgaacactgcacaggactatctttagagaagagtg
aaatctccagatcctctcaattatgtactcagacctctgt

gaattctgtttctatctatgaatctaaactgtcttaattatagtgcctga
taatttctcttattgccttcaggacatactgtgatgagaacttagcacca
tctagggatagtagaggagaaagaactggtcagtatttctacagatattc
tcactgcccagtagttctatgaaaagtccaagtcagaacaaaaactatcc
atgctgaaatggtctgactgctatgaatgtcacacgtaggctgcccctga
cacacacagaaggaaaagaaatcctactatttatggatattcaggaaaaa
tttcttcacttacttttttcttccttttaattctgctaaagtacttctca
ctggaatagaaatggaagtgggaagacaggatcaaagtcagtgataatac
aatattttttacttgtttcatggaacattatttttattctatatatggat
tttcattaaatcaagttagttaggagtctcaaatacattgaaatgaagaa
atgaagcatcttagtaaataagcatatttataaaacattctgaagtagcc
atttatctgcacttataaaattaagatgacaagccttcctgctccccttc
tccccaaccctccgttcttcccccattcctctttccttttttttccctct
tctgtgagcctggacactactttcatggaatagcttcccatttttatatt
attttatattaagaacagacaagtctgaccctatttaacctcaatcacat
tgatagagatagaattttggaaaggtcatcttattgattaaatcttcaac
caacagattaggggaagacaacaccatggtaaacagtattccttagattt
tttgcaaattttttgtcttttattttttggtgcacttgaattctgttgga
ataatttcatatctgaaccccagaaagtgtgaaatatcatttcataacta
tgaaatatcatttcatagctaaatattttggagttttaaagaacaattta
aaaattgaacagagaatgttttttctagacctgtaaatagtaggggggtg
gggtggaactgccaaattgcacgagaactggccaggtagaagacttcagg
actcaaggaagaacttaaatgaatgccgacatgtgaaggaactccatgct
tcccttcagcaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61322330_61323471
seq2: B6Ng01-324A08.b_48_1187

seq1  GAATTCCATCTGACAGTTTATATGTCTACAAATTTGTAAATTAAACTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGACAGTTTATATGTCTACAAATTTGTAAATTAAACTTTG  50

seq1  CTTGCAGTGACTCCAGAGACATCTTAAAAAAAAAGAGCTAGAAACAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGTGACTCCAGAGACATCTTAAAAAAAAAGAGCTAGAAACAACCA  100

seq1  CGAGTAATAATAACACTGTACACAGTAACTAGATGAGCAACACACCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTAATAATAACACTGTACACAGTAACTAGATGAGCAACACACCAGGG  150

seq1  ACACAAATTACACTTGTTTTAGTCATATATCCAATCAGTGAAACAACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATTACACTTGTTTTAGTCATATATCCAATCAGTGAAACAACTAA  200

seq1  TCAAATTAGAGTTTGAAATATACAGATACTGAACTGAGTCAAAGGAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTAGAGTTTGAAATATACAGATACTGAACTGAGTCAAAGGAGAAT  250

seq1  TGAATTGCATGAAGATACAATGACAGTTCTTGACAAGCAGAAGCCAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGCATGAAGATACAATGACAGTTCTTGACAAGCAGAAGCCAAAAA  300

seq1  TGTGTGACAATTTCTATGTTTTTTTTTCCATTATTAGTGACAATCTGTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGACAATTTCTATGTTTTTTTTTCCATTATTAGTGACAATCTGTCG  350

seq1  TGCTCATATAACCTCACTAACAAGATCGTTGTGTGAGGTAAGCACACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATATAACCTCACTAACAAGATCGTTGTGTGAGGTAAGCACACACA  400

seq1  GAGCAAGAACAATGCCTGTATAGACAAAGACTGAGCCTAAGGTCCTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGAACAATGCCTGTATAGACAAAGACTGAGCCTAAGGTCCTGAAG  450

seq1  CAAGTTAAGAGTGCAGTACCAGGAAAAGTAAACTCAAGGACAAATATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTAAGAGTGCAGTACCAGGAAAAGTAAACTCAAGGACAAATATCAT  500

seq1  TCATTATCAAAGATGGTGTCCTCCCTTCGACTCAGTTTTTAGAATATTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATCAAAGATGGTGTCCTCCCTTCGACTCAGTTTTTAGAATATTAC  550

seq1  TTCTTTAGTAATACTCTCCTCCCCCAACTCTTGTGTGTGTATATGTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGTAATACTCTCCTCCCCCAACTCTTGTGTGTGTATATGTCTCA  600

seq1  TAAATTTTTAACTCTTCAGACTAGATGAAAGTAGCATTTTCTGCAAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTAACTCTTCAGACTAGATGAAAGTAGCATTTTCTGCAAGATG  650

seq1  ATTAGGCTGAAGGCCTCTGGACTAAAGAGAGAGGAAGGAAGAGATCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGCTGAAGGCCTCTGGACTAAAGAGAGAGGAAGGAAGAGATCTTTC  700

seq1  CCACTTCAGAAGGAAGTTGAGTGATTCAAGCACGTTCAGCAAGGATGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCAGAAGGAAGTTGAGTGATTCAAGCACGTTCAGCAAGGATGTAA  750

seq1  AGCAAGATATTTAAAAGGAGGATGAATAGGGAGCATGGGCTGGAATCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGATATTTAAAAGGAGGATGAATAGGGAGCATGGGCTGGAATCAGT  800

seq1  CACCAAGCTTTCGAGGCCATCAAGAGAAAGCAAACACAATCTTTTGATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGCTTTCGAGGCCATCAAGAGAAAGCAAACACAATCTTTTGATGT  850

seq1  GGGATACTAACAGAAATAAAACACCCACCATTATATTCTTCTTCAATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACTAACAGAAATAAAACACCCACCATTATATTCTTCTTCAATATA  900

seq1  AAGTTGAAGGGGAAGTTAGTGAGACAGGACAGAATGCTCAGACTGCATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAAGGGGAAGTTAGTGAGACAGGACAGAATGCTCAGACTGCATTC  950

seq1  CCTGCATGAGAGAAAGGCAT-GGATGAACTGTAGTTCACATAGCATGTTG  999
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCTGCATGAGAGAAAGGCATGGGATGAACTGTAGTTCACATAGCATGTTG  1000

seq1  ATGAGAGGCAGGTACAGGCTCAGCCGGCATGGATCTCAGATTCAGCGATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGCAGGTACAGGCTCAGCCGGCATGGATCTCAGATTCAGCGATT  1050

seq1  TG-TACATGGTCTGATGAACACCTGCCACAGGACTATCTTTAGAGAAGAG  1098
      || |||||||||||||||||| ||| ||||||||||||||||||||||| 
seq2  TGTTACATGGTCTGATGAACA-CTG-CACAGGACTATCTTTAGAGAAGA-  1097

seq1  GTGAAAATCTCCAGAT-CTCTCATTAATGTACTCAAGGACTCTGT  1142
      ||| |||||||||||| |||||| | |||||||| ||  ||||||
seq2  GTG-AAATCTCCAGATCCTCTCAATTATGTACTC-AGACCTCTGT  1140


seq1: chr7_61450572_61451747
seq2: B6Ng01-324A08.g_65_1230 (reverse)

seq1  CTTCCTGCTGAAGGAGAGCTATGTAAGTTCCCTCTCCCCATTGTCCGGCA  50
      ||||||||||||||  ||| |||  |||||| || |     ||| |||||
seq2  CTTCCTGCTGAAGGGAAGC-ATG-GAGTTCCTTCAC----ATGT-CGGCA  43

seq1  TTTCATCTAAGGTTCCTCCCTTTGAGTCCTGAAAGTCTCTTACCTCGCAG  100
       ||||| ||| |||| |||  |||||||||| ||||||  ||||| ||  
seq2  -TTCATTTAA-GTTCTTCC--TTGAGTCCTG-AAGTCTTCTACCTGGCCA  88

seq1  GTCTCTGGTGC-ATTCTGCAG-TCCACCCCCACCCCCTACTAATTTAACA  148
      || ||| |||| |||  |||| ||||||||  ||||||||| |||||   
seq2  GT-TCTCGTGCAATTTGGCAGTTCCACCCCACCCCCCTACT-ATTTACAG  136

seq1  GTCTAG-AAAAACATTCTCCTGTTCAATTTTT-AATTG-TCTTTAAAACT  195
      |||||| ||||||||||| ||||||||||||| ||||| |||||||||||
seq2  GTCTAGAAAAAACATTCT-CTGTTCAATTTTTAAATTGTTCTTTAAAACT  185

seq1  CCAAAATATTTAGCTATGAAATGATATTTCATAGTTATGAAATGATATTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATATTTAGCTATGAAATGATATTTCATAGTTATGAAATGATATTT  235

seq1  CACACTTTCTGGGGTTCAGATATGAAATTATTCCAACAGAATTCAAGTGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTCTGGGGTTCAGATATGAAATTATTCCAACAGAATTCAAGTGC  285

seq1  ACCAAAAAATAAAAGACAAAAAATTTGCAAAAAATCTAAGGAATACTGTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAATAAAAGACAAAAAATTTGCAAAAAATCTAAGGAATACTGTT  335

seq1  TACCATGGTGTTGTCTTCCCCTAATCTGTTGGTTGAAGATTTAATCAATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGGTGTTGTCTTCCCCTAATCTGTTGGTTGAAGATTTAATCAATA  385

seq1  AGATGACCTTTCCAAAATTCTATCTCTATCAATGTGATTGAGGTTAAATA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACCTTTCCAAAATTCTATCTCTATCAATGTGATTGAGGTTAAATA  435

seq1  GGGTCAGACTTGTCTGTTCTTAATATAAAATAATATAAAAATGGGAAGCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGACTTGTCTGTTCTTAATATAAAATAATATAAAAATGGGAAGCT  485

seq1  ATTCCATGAAAGTAGTGTCCAGGCTCACAGAAGAGGGAAAAAAAAGGAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATGAAAGTAGTGTCCAGGCTCACAGAAGAGGGAAAAAAAAGGAAA  535

seq1  GAGGAATGGGGGAAGAACGGAGGGTTGGGGAGAAGGGGAGCAGGAAGGCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATGGGGGAAGAACGGAGGGTTGGGGAGAAGGGGAGCAGGAAGGCT  585

seq1  TGTCATCTTAATTTTATAAGTGCAGATAAATGGCTACTTCAGAATGTTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTTAATTTTATAAGTGCAGATAAATGGCTACTTCAGAATGTTTT  635

seq1  ATAAATATGCTTATTTACTAAGATGCTTCATTTCTTCATTTCAATGTATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATGCTTATTTACTAAGATGCTTCATTTCTTCATTTCAATGTATT  685

seq1  TGAGACTCCTAACTAACTTGATTTAATGAAAATCCATATATAGAATAAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTCCTAACTAACTTGATTTAATGAAAATCCATATATAGAATAAAA  735

seq1  ATAATGTTCCATGAAACAAGTAAAAAATATTGTATTATCACTGACTTTGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTCCATGAAACAAGTAAAAAATATTGTATTATCACTGACTTTGA  785

seq1  TCCTGTCTTCCCACTTCCATTTCTATTCCAGTGAGAAGTACTTTAGCAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTTCCCACTTCCATTTCTATTCCAGTGAGAAGTACTTTAGCAGA  835

seq1  ATTAAAAGGAAGAAAAAAGTAAGTGAAGAAATTTTTCCTGAATATCCATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGGAAGAAAAAAGTAAGTGAAGAAATTTTTCCTGAATATCCATA  885

seq1  AATAGTAGGATTTCTTTTCCTTCTGTGTGTGTCAGGGGCAGCCTACGTGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAGGATTTCTTTTCCTTCTGTGTGTGTCAGGGGCAGCCTACGTGT  935

seq1  GACATTCATAGCAGTCAGACCATTTCAGCATGGATAGTTTTTGTTCTGAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCATAGCAGTCAGACCATTTCAGCATGGATAGTTTTTGTTCTGAC  985

seq1  TTGGACTTTTCATAGAACTACTGGGCAGTGAGAATATCTGTAGAAATACT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTTTTCATAGAACTACTGGGCAGTGAGAATATCTGTAGAAATACT  1035

seq1  GACCAGTTCTTTCTCCTCTACTATCCCTAGATGGTGCTAAGTTCTCATCA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGTTCTTTCTCCTCTACTATCCCTAGATGGTGCTAAGTTCTCATCA  1085

seq1  CAGTATGTCCTGAAGGCAATAAGAGAAATTATCAGGCACTATAATTAAGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGTCCTGAAGGCAATAAGAGAAATTATCAGGCACTATAATTAAGA  1135

seq1  CAGTTTAGATTCATAGATAGAAACAGAATTC  1176
      |||||||||||||||||||||||||||||||
seq2  CAGTTTAGATTCATAGATAGAAACAGAATTC  1166


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