BAC Information

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BAC

Clone NameB6Ng01-324M21
Chromosome7 (Build37)
Map Location 135,816,558 - 135,929,479
singlet/doubletdoublet
Overlap geneInpp5f, LOC100043651, 1110007A13Rik, Sec23ip
Upstream geneBcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030
Downstream geneLOC210714, LOC100043144, Ppapdc1a, Brwd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324M21.bB6Ng01-324M21.g
ACCGA113027GA113028
length1,1391,156
definitionB6Ng01-324M21.b B6Ng01-324M21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,928,320 - 135,929,479)(135,816,558 - 135,817,716)
sequence
gaattcctgtttgcaaaccactgatgtgggtgatgctccaaggtttcttc
caagtgttacctgactttgcagttctgatttttgaaattcccctagtcaa
caaatgtttgataaggaccttattcaatggcaagactctgaggcccattg
taaacactatgctaatgtcaagacacagaaaccataggtggggctaagat
gtatggaagctggttcagtgtttgtccagtgtcatcgggcctaggtttga
taactcgagactataaaccaggcatggagacacaaacctgaaatcccaac
atttggacgaggcaagggtatcagaggtgcgagatcaccctcaaatacaa
atctaggttaaggccagcctgggctacatgagataacgtcttgggaaggg
ggaggcaatagtgatagaaaaatgtgtctaaagacaagttcaccaaaaca
ttctattttatgctccccaacttgagattaagtggaaacaaggggcactc
agtggcatggactgcttgctccaaatgccccttccctgcccaagatccgt
aggacacaagcagaatcatacaactcaaacttgttaaaattgaaaaagct
aaacagatttcattaaaatacacaccaagaaccactatttccccttattc
tgacagtactggaactcatagggaagctaagcaagcagtctggtgtagag
aaacgaaggccaaagggaaccagaacccactcggctatgtgcctcccagg
aggggaatttactggaatagcaggcatttactgctgtgtcctcaggtaga
caaagacatgagtggaaactgctgcctcggaaggagggaagctctaaatc
attggctctcaacttgcctaatcctgcggccctttaattcggttagttcc
catgctgtggtgacacccaaccataaaatgattttgctgctgcgtcataa
ctgccattttctactgttatgagtggtaatgaatggtatatctgatatgt
gaccactgtgagaggccgcctccacagttgagacactgctcaaatctcct
gtctaatcatctggtatgataccctggaggctacaggttgaacagaacag
ggagagaacacagtttgcagctaaaggaatcaatgttat
gaattcttaggttaggcagtggtggcacatgcctttaatcccaacacctc
cggaggcaaaggctggcagaaaaaaggaaaagttctaaattgggaatgat
ggtgtgtatctataatcccagcactcaggaggagactatagaggttgtaa
aggggattagtccagcctaggctatccagtaaattcaaggcctgggctat
ataagaactcagtttgaaaaaacaaattggttataatggtgcacaccttt
agtccagcacaaagtgagtttgaggctgacctggcttacataccaagttc
caggacagccagggctacatagtgtgaccctgcctcaaaaacaaaataat
ccaaagtgaagagctggcaagatggcccatcaggtcaagcacttgatggg
caagccttatcacccatgtgtacattttcatccctggcacccacgtaagg
gggcggggcgtgagagcagacgccataaagttctctaactctgccccctg
cacatgcttatacatgtgccccccaccgagagtaaagacaattttaaaag
tctaagaattagggaacttgtttttgcagaatgaatttgtgaaggcaaac
ttgttgaattaaacagcatatacacttaaagttgatatttagcattcaga
gatactgcaccagaagcactgaaaatcctcagacttgccctgcccaccca
acacaagcagcaggaaattagaaaccgtttttaagggatcacacagcttc
tattctcagtagcaatgggaccccgctgttgtttttcatgttcaccaatg
ctgactctgttcagttatttaaatttacccgtcagtaggttaaaacctct
tttatatcctgacatttgcaatttactgttagtagggactgtagcatctt
gctcactgggtcttttgtacccagttttttcttactctgtttatggtact
ctataaagtgttgattttctgtggcaagtacattctcatgagagttcctt
gttttgtttttttaaacctttgctgaaatgtcacttgtacacagatttaa
attttttctgtgtcacatcggaaacatcatctttgtctttctggttttta
tttatgccttgggaagttcatgctcaacctacagctgtccaaaactacta
cttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135928320_135929479
seq2: B6Ng01-324M21.b_35_1173 (reverse)

seq1  ATAACATTGATTCTCTTTTTAAAGCTGCAAACTGTTGTCTCTCCCTGTTT  50
      ||||||||||||| ||||    |||||||||||||  |||||||||||| 
seq2  ATAACATTGATTC-CTTT----AGCTGCAAACTGTGTTCTCTCCCTGTT-  44

seq1  CCTTGTCAACCTGTAGCCTCCAAGGGGTAATTCATAACCAGATGGAATTA  100
       ||  |||||||||||||||||  |||||  |||| ||||||||  ||||
seq2  -CTGTTCAACCTGTAGCCTCCA--GGGTA--TCAT-ACCAGATG--ATTA  86

seq1  GGACAGGAAGATTTGGAGCAGTGTCCTCAACCTGTGGA-GCGGCCTCTTC  149
       |||||| |||||| ||||||||| ||||| ||||||| |||||||| ||
seq2  -GACAGG-AGATTT-GAGCAGTGT-CTCAA-CTGTGGAGGCGGCCTC-TC  130

seq1  ACAGTGGTCACATATCAGATAATACCATTCATTACCACTCATAACAGTAG  199
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACAGTGGTCACATATCAGAT-ATACCATTCATTACCACTCATAACAGTAG  179

seq1  AAAAATGGCAGTTATGACGCAGCAGCAAAATCATTTTATGGTTGGGTGTC  249
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAAATGGCAGTTATGACGCAGCAGCAAAATCATTTTATGGTTGGGTGTC  228

seq1  ACCACAGCATGGGAACTAACCGAATTAAAGGGCCGCAGGATTAGGCAAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGCATGGGAACTAACCGAATTAAAGGGCCGCAGGATTAGGCAAGT  278

seq1  TGAGAGCCAATGATTTAGAGCTTCCCTCCTTCCGAGGCAGCAGTTTCCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCCAATGATTTAGAGCTTCCCTCCTTCCGAGGCAGCAGTTTCCAC  328

seq1  TCATGTCTTTGTCTACCTGAGGACACAGCAGTAAATGCCTGCTATTCCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTTTGTCTACCTGAGGACACAGCAGTAAATGCCTGCTATTCCAG  378

seq1  TAAATTCCCCTCCTGGGAGGCACATAGCCGAGTGGGTTCTGGTTCCCTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCCCCTCCTGGGAGGCACATAGCCGAGTGGGTTCTGGTTCCCTTT  428

seq1  GGCCTTCGTTTCTCTACACCAGACTGCTTGCTTAGCTTCCCTATGAGTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCGTTTCTCTACACCAGACTGCTTGCTTAGCTTCCCTATGAGTTC  478

seq1  CAGTACTGTCAGAATAAGGGGAAATAGTGGTTCTTGGTGTGTATTTTAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTGTCAGAATAAGGGGAAATAGTGGTTCTTGGTGTGTATTTTAAT  528

seq1  GAAATCTGTTTAGCTTTTTCAATTTTAACAAGTTTGAGTTGTATGATTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTGTTTAGCTTTTTCAATTTTAACAAGTTTGAGTTGTATGATTCT  578

seq1  GCTTGTGTCCTACGGATCTTGGGCAGGGAAGGGGCATTTGGAGCAAGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGTCCTACGGATCTTGGGCAGGGAAGGGGCATTTGGAGCAAGCAG  628

seq1  TCCATGCCACTGAGTGCCCCTTGTTTCCACTTAATCTCAAGTTGGGGAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCCACTGAGTGCCCCTTGTTTCCACTTAATCTCAAGTTGGGGAGC  678

seq1  ATAAAATAGAATGTTTTGGTGAACTTGTCTTTAGACACATTTTTCTATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAGAATGTTTTGGTGAACTTGTCTTTAGACACATTTTTCTATCA  728

seq1  CTATTGCCTCCCCCTTCCCAAGACGTTATCTCATGTAGCCCAGGCTGGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCCTCCCCCTTCCCAAGACGTTATCTCATGTAGCCCAGGCTGGCC  778

seq1  TTAACCTAGATTTGTATTTGAGGGTGATCTCGCACCTCTGATACCCTTGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTAGATTTGTATTTGAGGGTGATCTCGCACCTCTGATACCCTTGC  828

seq1  CTCGTCCAAATGTTGGGATTTCAGGTTTGTGTCTCCATGCCTGGTTTATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCCAAATGTTGGGATTTCAGGTTTGTGTCTCCATGCCTGGTTTATA  878

seq1  GTCTCGAGTTATCAAACCTAGGCCCGATGACACTGGACAAACACTGAACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCGAGTTATCAAACCTAGGCCCGATGACACTGGACAAACACTGAACC  928

seq1  AGCTTCCATACATCTTAGCCCCACCTATGGTTTCTGTGTCTTGACATTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCATACATCTTAGCCCCACCTATGGTTTCTGTGTCTTGACATTAG  978

seq1  CATAGTGTTTACAATGGGCCTCAGAGTCTTGCCATTGAATAAGGTCCTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTTTACAATGGGCCTCAGAGTCTTGCCATTGAATAAGGTCCTTA  1028

seq1  TCAAACATTTGTTGACTAGGGGAATTTCAAAAATCAGAACTGCAAAGTCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACATTTGTTGACTAGGGGAATTTCAAAAATCAGAACTGCAAAGTCA  1078

seq1  GGTAACACTTGGAAGAAACCTTGGAGCATCACCCACATCAGTGGTTTGCA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACACTTGGAAGAAACCTTGGAGCATCACCCACATCAGTGGTTTGCA  1128

seq1  AACAGGAATTC  1160
      |||||||||||
seq2  AACAGGAATTC  1139

seq1: chr7_135816558_135817716
seq2: B6Ng01-324M21.g_63_1218

seq1  GAATTCTTAGGTTAGGCAGTGGTGGCACATGCCTTTAATCCCAACACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGTTAGGCAGTGGTGGCACATGCCTTTAATCCCAACACCTC  50

seq1  CGGAGGCAAAGGCTGGCAGAAAAAAGGAAAAGTTCTAAATTGGGAATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCAAAGGCTGGCAGAAAAAAGGAAAAGTTCTAAATTGGGAATGAT  100

seq1  GGTGTGTATCTATAATCCCAGCACTCAGGAGGAGACTATAGAGGTTGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTATCTATAATCCCAGCACTCAGGAGGAGACTATAGAGGTTGTAA  150

seq1  AGGGGATTAGTCCAGCCTAGGCTATCCAGTAAATTCAAGGCCTGGGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATTAGTCCAGCCTAGGCTATCCAGTAAATTCAAGGCCTGGGCTAT  200

seq1  ATAAGAACTCAGTTTGAAAAAACAAATTGGTTATAATGGTGCACACCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACTCAGTTTGAAAAAACAAATTGGTTATAATGGTGCACACCTTT  250

seq1  AGTCCAGCACAAAGTGAGTTTGAGGCTGACCTGGCTTACATACCAAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGCACAAAGTGAGTTTGAGGCTGACCTGGCTTACATACCAAGTTC  300

seq1  CAGGACAGCCAGGGCTACATAGTGTGACCCTGCCTCAAAAACAAAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGGGCTACATAGTGTGACCCTGCCTCAAAAACAAAATAAT  350

seq1  CCAAAGTGAAGAGCTGGCAAGATGGCCCATCAGGTCAAGCACTTGATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTGAAGAGCTGGCAAGATGGCCCATCAGGTCAAGCACTTGATGGG  400

seq1  CAAGCCTTATCACCCATGTGTACATTTTCATCCCTGGCACCCACGTAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTTATCACCCATGTGTACATTTTCATCCCTGGCACCCACGTAAGG  450

seq1  GGGCGGGGCGTGAGAGCAGACGCCATAAAGTTCTCTAACTCTGCCCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGGGCGTGAGAGCAGACGCCATAAAGTTCTCTAACTCTGCCCCCTG  500

seq1  CACATGCTTATACATGTGCCCCCCACCGAGAGTAAAGACAATTTTAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTTATACATGTGCCCCCCACCGAGAGTAAAGACAATTTTAAAAG  550

seq1  TCTAAGAATTAGGGAACTTGTTTTTGCAGAATGAATTTGTGAAGGCAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAATTAGGGAACTTGTTTTTGCAGAATGAATTTGTGAAGGCAAAC  600

seq1  TTGTTGAATTAAACAGCATATACACTTAAAGTTGATATTTAGCATTCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAATTAAACAGCATATACACTTAAAGTTGATATTTAGCATTCAGA  650

seq1  GATACTGCACCAGAAGCACTGAAAATCCTCAGACTTGCCCTGCCCACCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGCACCAGAAGCACTGAAAATCCTCAGACTTGCCCTGCCCACCCA  700

seq1  ACACAAGCAGCAGGAAATTAGAAACCGTTTTTAAGGGATCACACAGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGCAGCAGGAAATTAGAAACCGTTTTTAAGGGATCACACAGCTTC  750

seq1  TATTCTCAGTAGCAATGGGACCCCGCTGTTGTTTTTCATGTTCACCAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCAGTAGCAATGGGACCCCGCTGTTGTTTTTCATGTTCACCAATG  800

seq1  CTGACTCTGTTCAGTTATTTAAATTTACCCGTCAGTAGGTTAAAACCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCTGTTCAGTTATTTAAATTTACCCGTCAGTAGGTTAAAACCTCT  850

seq1  TTTATATCCTGACATTTGCAATTTACTGTTAGTAGGGACTGTAGCATCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCCTGACATTTGCAATTTACTGTTAGTAGGGACTGTAGCATCTT  900

seq1  GCTCACTGGGGTCTTTTGTACCCAGTTTTTTCTTACTCTGTTTATGGTAC  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACT-GGGTCTTTTGTACCCAGTTTTTTCTTACTCTGTTTATGGTAC  949

seq1  TCTATAAAGTGTTGATTTTCTGTGGCAAGTACATTCTCATGAGAGTTCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAGTGTTGATTTTCTGTGGCAAGTACATTCTCATGAGAGTTCCT  999

seq1  TGTTTTGTTTTTTTAAACCTTTGCTGATAATGTCACTTGTACACAGATTT  1050
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGTTTTGTTTTTTTAAACCTTTGCTGA-AATGTCACTTGTACACAGATTT  1048

seq1  AAATTTTTCCTGTTGTCACATCGGAAACATCATCTTTGTC-TTCTGGTTT  1099
      |||||||| ||| ||||||||||||||||||||||||||| |||||||||
seq2  AAATTTTTTCTG-TGTCACATCGGAAACATCATCTTTGTCTTTCTGGTTT  1097

seq1  TTATTTTATG-CTTGGG-AGGTCATGCTTCCACCTACAGCTGTGCAAAAA  1147
      ||| |||||| |||||| || |||||| || |||||||||||| | ||||
seq2  TTA-TTTATGCCTTGGGAAGTTCATGC-TCAACCTACAGCTGT-CCAAAA  1144

seq1  CTACTACTTTTT  1159
      ||||||||||||
seq2  CTACTACTTTTT  1156