BAC Information

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BAC

Clone NameB6Ng01-324N10
Chromosome7 (Build37)
Map Location 106,695,310 - 106,830,922
singlet/doubletdoublet
Overlap geneArrb1, EG245190, Slco2b1
Upstream geneA630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630
Downstream geneOlfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324N10.bB6Ng01-324N10.g
ACCGA113052GA113053
length1,181788
definitionB6Ng01-324N10.b B6Ng01-324N10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,829,735 - 106,830,922)(106,695,310 - 106,696,073)
sequence
gaattctgactatgctagaagatgctaaggagttgaggctgtagaacttg
ggtgtaggaagagttctaagctagacatgaggacactggcaagtacagag
aagacagccaagggatgctgagtgcaaacgacctcagcttagggttccac
agcagacctgaggctggccttgccaggcgcagtgatagggctgagtacac
atagagtactctgagccaggatggtgggagattttgcccaaggtcacatg
actaaagaggccaggaaccatgaaccacaaggcaggatagctaagaattt
accaagatatgaagcccgaaagatagtaagttgcttccaaattgaaaaaa
aagacaaacaacaaacttatttattattattatttttattattatcatca
tcatcatcattattactggggtctaaacctctcaggcctttcacatgcag
tggcaaggactctactactaagatatgtatgtctgaccctggaaatgagt
ctgaaaagtctattttgacaacataatttcaatttcactcataatttcaa
ttcaattgctactttgaatgggtacaaacttgactacattatgaagcctt
gtgcattttctctttccccaactatgtgagctgcttgttaagacctcagc
ttaaaagttaagtaaggtgcttattgctaagtaattctaattgcaaaaga
ataatttattttaaaaaaatcttgccagatgttcttgcagtggcctggta
cttctaggcatgtttattgaagtgcggaagagggcctccttcttagaaca
agaaagtttgagccagcaagtagacctgaaagggtcatttcttttttgtc
atttttttttttaaaatagagggtcaatttattagaatatgagttcaagt
ctgtctaagctccaggaccatcctgttctactgagccttgtcagctacct
caacctagggccaaagacaccccaggttgggatagccagcaagggccaga
atcacaaacctttgctggcttcagaccaaagttatgcttggagacaggaa
gcagagttctccactgccttaccagtgctgggtggactgaccagaagaac
atgtagagagaagtcaactgaagcttcttgggcaatgctgagtcaaggca
actagtacttggggacaagctaatgggatag
gaattcttatgaacgaagagcagcctcttttaggttgggattttcagaaa
cggcttattccctttctcctggtctgtgtcacccttcactcctccacccg
agcgagcagaagtttctctgtcttaccagcccctggggtctgagatagga
agtggggacagcttcttgtagcacttgtatgtctgggggagaaagaaagt
aagtggctggaacattccttttggtggtttttattattattattattatt
attattattattattattattattaaagacaggatttttctgtgtagatc
cggctatcctggaattctgtaggccaggctggcctttaactcagagatcc
acctgcctctgccccccccccgagggctgggatcgaaggtgtgtgtcaag
ctactgccaccaccacccagctgtctgtaacgttctttttattttatttt
tttaaaagatttatttattttatatatgtgagtacactatagctgtcttc
agacacgccagtagagggcatcagatcccattaccgatggttgtgagcca
ccatgtggttgctgggaattgaactcaggacctttggaagagcagtcagt
gctctttaaccactgagccatctctctagctccaactgtaacatcctgtt
ttgtttgtttttggttttgtattttgagacaggatttctctgtgtagccc
tgactgtcctggaaactcactctgtagatcaggcttggcctcaaactcag
atatctttcctgccctctaaactccaattgctgggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106829735_106830922
seq2: B6Ng01-324N10.b_49_1229 (reverse)

seq1  CTATCCCATTGGC-TGCTCCCAAGTGCTCTGCTGCCTGCCCCCAGCA-TG  48
      |||||||||| || ||  ||||||| ||  | |||||   | ||||| ||
seq2  CTATCCCATTAGCTTGTCCCCAAGTACT-AGTTGCCTTGACTCAGCATTG  49

seq1  GCCAAGAAGGCCTCAG-TGGCCTCTCTCTCCATGTTCTTCCTGGTCCAGT  97
       ||||||| || |||| || | ||||||| ||||||||| ||||| ||||
seq2  CCCAAGAA-GCTTCAGTTGACTTCTCTCTACATGTTCTT-CTGGT-CAGT  96

seq1  CCACCCAGCACCTGGTAAAGCAGGTGAGAACTCCTTGCTTCCTGTCCTTC  147
      |||||||||| ||||||| ||||  ||||||||  |||||||||||  ||
seq2  CCACCCAGCA-CTGGTAAGGCAGTGGAGAACTC--TGCTTCCTGTC--TC  141

seq1  CAAGCATACCTTTGGGTCTTGAAGCCAGCAAAGGTTTTGTGATTCTGGCC  197
      |||||||| |||| |||| ||||||||||||||| |||||||||||||||
seq2  CAAGCATAACTTT-GGTC-TGAAGCCAGCAAAGG-TTTGTGATTCTGGCC  188

seq1  CCTGCTGGCTATCCCAACCTGGGGTGTCTTTGGCCCTAGGTTGAGGTAGC  247
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGCTATCCCAACCTGGGGTGTCTTTGGCCCTAGGTTGAGGTAGC  238

seq1  TGACAAGGCTCAGTAGAACA-GATGGTCCTGGAGCTTAGACAGACTTGAA  296
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGACAAGGCTCAGTAGAACAGGATGGTCCTGGAGCTTAGACAGACTTGAA  288

seq1  CTCATATTCTAATAAATTGACCCTCTATTTT-AAAAAAAAAATGACAAAA  345
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTCATATTCTAATAAATTGACCCTCTATTTTAAAAAAAAAAATGACAAAA  338

seq1  AAGAAATGACCCTTTCAGGTCTACTTGCTGGCTCAAACTTTCTTGTTCTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGACCCTTTCAGGTCTACTTGCTGGCTCAAACTTTCTTGTTCTA  388

seq1  AGAAGGAGGCCCTCTTCCGCACTTCAATAAACATGCCTAGAAGTACCAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAGGCCCTCTTCCGCACTTCAATAAACATGCCTAGAAGTACCAGG  438

seq1  CCACTGCAAGAACATCTGGCAAGATTTTTTTAAAATAAATTATTCTTTTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCAAGAACATCTGGCAAGATTTTTTTAAAATAAATTATTCTTTTG  488

seq1  CAATTAGAATTACTTAGCAATAAGCACCTTACTTAACTTTTAAGCTGAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGAATTACTTAGCAATAAGCACCTTACTTAACTTTTAAGCTGAGG  538

seq1  TCTTAACAAGCAGCTCACATAGTTGGGGAAAGAGAAAATGCACAAGGCTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACAAGCAGCTCACATAGTTGGGGAAAGAGAAAATGCACAAGGCTT  588

seq1  CATAATGTAGTCAAGTTTGTACCCATTCAAAGTAGCAATTGAATTGAAAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGTAGTCAAGTTTGTACCCATTCAAAGTAGCAATTGAATTGAAAT  638

seq1  TATGAGTGAAATTGAAATTATGTTGTCAAAATAGACTTTTCAGACTCATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTGAAATTGAAATTATGTTGTCAAAATAGACTTTTCAGACTCATT  688

seq1  TCCAGGGTCAGACATACATATCTTAGTAGTAGAGTCCTTGCCACTGCATG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGTCAGACATACATATCTTAGTAGTAGAGTCCTTGCCACTGCATG  738

seq1  TGAAAGGCCTGAGAGGTTTAGACCCCAGTAATAATGATGATGATGATGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGCCTGAGAGGTTTAGACCCCAGTAATAATGATGATGATGATGAT  788

seq1  AATAATAAAAATAATAATAATAAATAAGTTTGTTGTTTGTCTTTTTTTTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAAAATAATAATAATAAATAAGTTTGTTGTTTGTCTTTTTTTTC  838

seq1  AATTTGGAAGCAACTTACTATCTTTCGGGCTTCATATCTTGGTAAATTCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGAAGCAACTTACTATCTTTCGGGCTTCATATCTTGGTAAATTCT  888

seq1  TAGCTATCCTGCCTTGTGGTTCATGGTTCCTGGCCTCTTTAGTCATGTGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATCCTGCCTTGTGGTTCATGGTTCCTGGCCTCTTTAGTCATGTGA  938

seq1  CCTTGGGCAAAATCTCCCACCATCCTGGCTCAGAGTACTCTATGTGTACT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGCAAAATCTCCCACCATCCTGGCTCAGAGTACTCTATGTGTACT  988

seq1  CAGCCCTATCACTGCGCCTGGCAAGGCCAGCCTCAGGTCTGCTGTGGAAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTATCACTGCGCCTGGCAAGGCCAGCCTCAGGTCTGCTGTGGAAC  1038

seq1  CCTAAGCTGAGGTCGTTTGCACTCAGCATCCCTTGGCTGTCTTCTCTGTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGCTGAGGTCGTTTGCACTCAGCATCCCTTGGCTGTCTTCTCTGTA  1088

seq1  CTTGCCAGTGTCCTCATGTCTAGCTTAGAACTCTTCCTACACCCAAGTTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAGTGTCCTCATGTCTAGCTTAGAACTCTTCCTACACCCAAGTTC  1138

seq1  TACAGCCTCAACTCCTTAGCATCTTCTAGCATAGTCAGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCCTCAACTCCTTAGCATCTTCTAGCATAGTCAGAATTC  1181

seq1: chr7_106695310_106696073
seq2: B6Ng01-324N10.g_70_839

seq1  GAATTCTTATGAACGAAGAGCAGCCTCTTTTAGGTTGGGATTTTCAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGAACGAAGAGCAGCCTCTTTTAGGTTGGGATTTTCAGAAA  50

seq1  CGGCTTATTCCCTTTCTCCTGGTCTGTGTCACCCTTCACTCCTCCACCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTATTCCCTTTCTCCTGGTCTGTGTCACCCTTCACTCCTCCACCCG  100

seq1  AGCGAGCAGAAGTTTCTCTGTCTTACCAGCCCCTGGGGTCTGAGATAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGCAGAAGTTTCTCTGTCTTACCAGCCCCTGGGGTCTGAGATAGGA  150

seq1  AGTGGGGACAGCTTCTTGTAGCACTTGTATGTCTGGGGGAGAAAGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGACAGCTTCTTGTAGCACTTGTATGTCTGGGGGAGAAAGAAAGT  200

seq1  AAGTGGCTGGAACATTCCTTTTGGTGGTTTTTATTATTATTATTATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGCTGGAACATTCCTTTTGGTGGTTTTTATTATTATTATTATTATT  250

seq1  ATTATTATTATTATTATTATTATTAAAGACAGGATTTTTCTGTGTAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTATTATTATTATTATTAAAGACAGGATTTTTCTGTGTAGATC  300

seq1  CGGCTATCCTGGAATTCTGTAGGCCAGGCTGGCCTTTAACTCAGAGATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTATCCTGGAATTCTGTAGGCCAGGCTGGCCTTTAACTCAGAGATCC  350

seq1  ACCTGCCTCTGCCCCCCCCCCGAGGGCTGGGATCGAAGGTGTGTGTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTCTGCCCCCCCCCCGAGGGCTGGGATCGAAGGTGTGTGTCAAG  400

seq1  CTACTGCCACCACCACCCAGCTGTCTGTAACGTTCTTTTTATTTTATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCCACCACCACCCAGCTGTCTGTAACGTTCTTTTTATTTTATTTT  450

seq1  TTTAAAAGATTTATTTATTTTATATATGTGAGTACACTATAGCTGTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGATTTATTTATTTTATATATGTGAGTACACTATAGCTGTCTTC  500

seq1  AGACACGCCAGTAGAGGGCATCAGATCCCATTACCGATGGTTGTGAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACGCCAGTAGAGGGCATCAGATCCCATTACCGATGGTTGTGAGCCA  550

seq1  CCATGTGGTTGCTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGTTGCTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAGT  600

seq1  GCTC-TTAACCACTGAGCCATCTCTCTAGCTCCAACTGTAACATCCTG-T  648
      |||| ||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTCTTTAACCACTGAGCCATCTCTCTAGCTCCAACTGTAACATCCTGTT  650

seq1  TTGTTTGTTTTTGGTTTTGTATTTTGAGACAGGATTTCTCTGTGTAGCCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTTTGGTTTTGTATTTTGAGACAGGATTTCTCTGTGTAGCCC  700

seq1  TGACTGTCCTGG-AACTCACTCTGTAGACCAGGC-TGGCCTCAAACTCAG  746
      |||||||||||| ||||||||||||||| ||||| |||||||||||||||
seq2  TGACTGTCCTGGAAACTCACTCTGTAGATCAGGCTTGGCCTCAAACTCAG  750

seq1  AAATC-TTCCTG-CCTCTAA  764
      | ||| |||||| |||||||
seq2  ATATCTTTCCTGCCCTCTAA  770