BAC Information

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BAC

Clone NameB6Ng01-326B21
Chromosome7 (Build37)16 (Build37)
Map Location 14,723,651 - 14,724,50060,861,539 - 60,861,842
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203
Downstream geneLOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326B21.bB6Ng01-326B21.g
ACCGA114004GA114005
length1,120675
definitionB6Ng01-326B21.b B6Ng01-326B21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,723,651 - 14,724,500)(60,861,539 - 60,861,842)
sequence
gaattctcaacagagaaatattgaatggcacctaaagaaatgttcaacat
ccttactcatcagggaaatgtaaatcaaaacgacactgagattccacctc
aaacaagtcagtatggctaagttcaaaaagtcaggtgtcaggagattctt
ttgaggatgtgaaaaaaagacgaacgctcctctattgttggtgggattgc
aagctgttataaccactctggaaatcagtctggtggtttctcaaaaaatt
ggatatagaattacctgcagacccagctgtacccaaaaggtgctccaaca
tataacaaggacacatgctacactacgttcatagcagccttatttataag
agacagaagcttgaaaaaagaaaggtgtacttcactagagaaaaggatac
agaaaaggtggtacatttacaaaagggagtactaatcatctataaaaaca
atgatatcacgaaattcatagacaaatggatgggacaacaaaatatcatc
ctgagtgaggtaacccaatcacaaagtatcacccatgatatgcactcaat
gataagtggatattagcccagaagctcaaaacacccaagatacaattccc
aaaacacatgaatttcaagaagaagaaagagccatgtgtggattctttgg
tctttcttagaagtgggaacaaaatactcatggggggaaatacagagaaa
aagtgtggagcagagactgaaggaaaggcaataaaaagactgctatacct
ggagatgcatcccatataacattcatatatatgtatatatatatgaatgg
tcacaatttcattgtgccattttaaagagcaattattctaagtttgtatt
tgttgctgcaacataaactatttatagcttttatggatggagggatttac
agaaaacgttcttactaactagaacccatgataggtcagaacgtggatat
ctctgattccttctagtgattctctttcagtttcatgggagattcctgtg
gctacttatctcaatagacagctagacacaggatgacactgtatgtacag
tgatctttgaacattgaatgcctgatcagttgctttcccctatgagccat
tgtgtcttagtgtttcaccc
gaattcctgatctttcaaagacttttatcacaaatgggtgttggattttg
tcaaatctatctcagcatctaatgagatgatcatgtggggttttttcttt
gagtttgtttatatagtggattatgttgatggatttccatatgttgtacc
atccctgcatccatgggatgaagtctacttgatcatgatggatgattgtt
tagggttgtgagaatattattgagtattgttgcattgatactcataggaa
attgttctgaaattctccttctttgttgggtctttgtttggtttaggaat
cagagtaattatggcttcatagaatgaactgggtagagtaccttcttttt
ctattttgtatcatagtttgaggagtattggaattaggtcctctttgaag
gtctgatagaattctacaataaacccatctggtctgggatattatttttg
ttgagagactattgatgactgtatttctttaggggatatgggactcttta
gtttattaatctgatcttgacttgactatagtacctggtatctgtatctg
tctagaaatttgtccttttcattcaagttttccagttttattgagtatag
gcttttttgtagtaggatatgattttttttctttttttctttttttcttt
ttcttttttttttttttttatagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14723651_14724500
seq2: B6Ng01-326B21.b_320_1168

seq1  CCCAGCTGTACCCAAAAGGTGCTCCAACATATAACAAGGACACATGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTGTACCCAAAAGGTGCTCCAACATATAACAAGGACACATGCTAC  50

seq1  ACTACGTTCATAGCAGCCTTATTTATAAGAGACAGAAGCTTGAAAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACGTTCATAGCAGCCTTATTTATAAGAGACAGAAGCTTGAAAAAAGA  100

seq1  AAGGTGTACTTCACTAGAGAAAAGGATACAGAAAAGGTGGTACATTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTACTTCACTAGAGAAAAGGATACAGAAAAGGTGGTACATTTACA  150

seq1  AAAGGGAGTACTAATCATCTATAAAAACAATGATATCACGAAATTCATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAGTACTAATCATCTATAAAAACAATGATATCACGAAATTCATAG  200

seq1  ACAAATGGATGGGACAACAAAATATCATCCTGAGTGAGGTAACCCAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGATGGGACAACAAAATATCATCCTGAGTGAGGTAACCCAATCA  250

seq1  CAAAGTATCACCCATGATATGCACTCAATGATAAGTGGATATTAGCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTATCACCCATGATATGCACTCAATGATAAGTGGATATTAGCCCAG  300

seq1  AAGCTCAAAACACCCAAGATACAATTCCCAAAACACATGAATTTCAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAAAACACCCAAGATACAATTCCCAAAACACATGAATTTCAAGAA  350

seq1  GAAGAAAGAGCCATGTGTGGATTCTTTGGTCTTTCTTAGAAGTGGGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGAGCCATGTGTGGATTCTTTGGTCTTTCTTAGAAGTGGGAACA  400

seq1  AAATACTCATGGGGGGAAATACAGAGAAAAAGTGTGGAGCAGAGACTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTCATGGGGGGAAATACAGAGAAAAAGTGTGGAGCAGAGACTGAA  450

seq1  GGAAAGGCAATAAAAAGACTGCTATACCTGGAGATGCATCCCATATAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGCAATAAAAAGACTGCTATACCTGGAGATGCATCCCATATAACA  500

seq1  TTCATATATATGTATATATATATGAATGGTCACAATTTCATTGTGCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATATATGTATATATATATGAATGGTCACAATTTCATTGTGCCATT  550

seq1  TTAAAGAGCAATTATTCTAAGTTTGTATTTGTTGCTGCAACATAAACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGCAATTATTCTAAGTTTGTATTTGTTGCTGCAACATAAACTAT  600

seq1  TTATAGCTTTTATGGATGGAGGGATTTACAGAAAACGTTCTTACTAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCTTTTATGGATGGAGGGATTTACAGAAAACGTTCTTACTAACTA  650

seq1  GAACCCATGATAGGTCAGAACGTGGATATCTCTGATTCCTTCTAGTGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCATGATAGGTCAGAACGTGGATATCTCTGATTCCTTCTAGTGATT  700

seq1  CTCTTTCAGTTTCATGGGAGATTCCTGTGGCTACTTATCTCAATAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCAGTTTCATGGGAGATTCCTGTGGCTACTTATCTCAATAGACAG  750

seq1  CTAGACACAGGATGACACTGTATGTACAAGTGATCTTTGAACATTG-ATG  799
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  CTAGACACAGGATGACACTGTATGTAC-AGTGATCTTTGAACATTGAATG  799

seq1  CCTGATCAGGTTGC-TTCCCCTATGAGCAATTGTGTCTTAGGTGTTTCAC  848
      |||||||| ||||| ||||||||||||| ||||||||||| |||||||||
seq2  CCTGATCA-GTTGCTTTCCCCTATGAGCCATTGTGTCTTA-GTGTTTCAC  847

seq1  CC  850
      ||
seq2  CC  849

seq1: chr16_60861539_60861842
seq2: B6Ng01-326B21.g_686_734 (reverse)

seq1  ATAAAAAATGGAAAAAAAAAAAAGAAATAATCAATAATGTGCATCTATTC  50
      ||||||     |||||||||||||||| ||  || || |           
seq2  ATAAAA-----AAAAAAAAAAAAGAAA-AAGAAAAAAAG-----------  33

seq1  ACATAAAGGCACACATTTACTTATAAAAGAAAGTTAAAAAACATTTATTG  100
      | | ||||                |||| |||                  
seq2  AAAAAAAG----------------AAAAAAAA------------------  49

seq1  AATTATCATTGGATTTCATATATGAAAGGTACAGTGACTGGGAGGGGGCA  150
                                                        
seq2  --------------------------------------------------  49

seq1  GTGAGCATGATGCAAAGTGAACAAGTTAAAAACAATAAATTAAATAAAAA  200
                                                        
seq2  --------------------------------------------------  49

seq1  AATCAAATTAGAATCAACCATGTTTTTCAGCAGAAATATTTTGTGTGCTT  250
                                                        
seq2  --------------------------------------------------  49

seq1  GAATGTCATGGCTTGTTAAAATAAAGATCCTGAAAAAAAGAAAAAGAAAA  300
                                                        
seq2  --------------------------------------------------  49

seq1  AAAA  304
          
seq2  ----  49