BAC Information

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BAC

Clone NameB6Ng01-329G12
Chromosome7 (Build37)
Map Location 121,105,672 - 121,183,200
singlet/doubletdoublet
Overlap geneSpon1
Upstream geneLOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228
Downstream geneRras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc, EG627967
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329G12.bB6Ng01-329G12.g
ACCGA116379GA116380
length1,1781,151
definitionB6Ng01-329G12.b B6Ng01-329G12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,105,672 - 121,106,852)(121,182,060 - 121,183,200)
sequence
gaattcttctgataacactgggaggaagaacatttggttttcttgagttt
gtataactacgtgcattttgcaatgccggggccttggcacgcacagggta
gcatttgggctcagcactttgaactctgaggacagtttcacaattgggtt
tttcctgtcctagccaacatctggatcacagtggcccaggtcagcgtgtg
cttgaaaccctgtgtgaacctccctaaaagagcatagaacaagctgtcca
gagaccagggaggggcctatgcctaggcctccttcagcagctgtgcaagc
tagggccatttcagaagcagataagaaagtcatggtttggtgctccatca
ctgattgaacaattatcaatcattatatcattattttgacttgttctcac
tgtgtgctgggatacatgggagactcctgttgctacaaataacgtatata
ttattttttaaagagtattagccagttctcatattaccttctaaccctga
atagtggtccccttctcagctaggtatgtgtcatctctaaccctttatca
catttacacagatgttggtatctatctatgtataggacatttttacaatg
atagagcagcgctatacttgctgggcagcatactactttattttacttta
tgtactcttatggatagctttccaaacaccgctctgtctcattcttatac
tccactgcagggaaccctgtgctatgttctactttctctgactgatagac
atttaggtcgtcttcaattttgtgccactgctgctataaacagttatgcg
gtaaacattcataatatctacttatgtgtgtttacctgtttttttactta
ttcataatgagtttccagaagtcgaatagttgagttcatgagtatttgtc
cttttcagctatcatagatattaccaaatagttcccaaacaggccattct
catacaatggcatgtccaagtgtccgtcccctgcccctaccagttctggg
aaatcccctctttttatttttttctatcttataggcaaagcactattgtc
tgcttcatatgcccccaatttgtgatattggtaaatattctctcacatcc
tgtcatagcacttacttttttaaaattctgtctcatgtgtcatgatcact
gtacgactactgatgtatttgaatctcc

gaattcattaatgcctgctgtcctcattaggggctgttagctcatatgtg
atggtttgcaaaagctgtggctgttagtgcactggatctttgcctgtcga
agggcagggtctgtttccccacccctttgaagctgggcttggtttggcaa
atgggatgtgagcagacaccatacctgagaagccactgctaggtgtgagg
gcaagactgggtgacctcactgcagagacctctcggagagaggccccagg
aaagcaggtgaggctggggtgctgcgccacccctacttgattgtggctgc
acaaatgagacttgagtccaacacagctacacctcagaagagggaatcca
agccagcttgcctctgagcagcaggctcacgctaatacaggtttgtttaa
agcactgacttgtaagcagggaccagccatagggcactgagctacttcat
tagcctccctgcctgagtttttagcccacccaatagtaagtaaaatgagc
aattctttccctatgaaacatggacatgccttcctcaaaagaacctcctc
tgactccacagatgaagcctcctgtttgcacttgtcatcgcttcccatat
atctctcctttgaacacagatgctcgtgactattattagatacctgttta
ccacaccgcagcacagtttcctggagaaactgctgagcacatagccttta
actggtatggactgatgcctgcctgccatactccctaaggaaaggatctg
tcaacttagtccatctctatgccagagaatgagctgtctttttgtttgtt
ttgttttccttatacaggtttgtgtgtgtgtgtgtgtctgtgtgtgtgtc
cttggctgtcctagaactagctctgtagaccaggctggcctctgcctcct
gagtgcttggggttaaaggcatgccagccagatggactgtctttcctttt
ccttttcttttctttttttttttttttcttcttttaagatttaatttatt
ttatgtatgtgaatacactgtagctaatctcagaaccacaccagaaggac
ggcattggattccaattacagaattgttgtttagccacatggtgttgctg
ggaactgaacttcaggatgagcagcagctctttaacccacggaagccatt
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_121105672_121106852
seq2: B6Ng01-329G12.b_44_1221

seq1  GAATTCTTCTGATAACACTGGGAGGAAGAACATTTGGTTTTCTTGAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGATAACACTGGGAGGAAGAACATTTGGTTTTCTTGAGTTT  50

seq1  GTATAACTACGTGCATTTTGCAATGCCGGGGCCTTGGCACGCACAGGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAACTACGTGCATTTTGCAATGCCGGGGCCTTGGCACGCACAGGGTA  100

seq1  GCATTTGGGCTCAGCACTTTGAACTCTGAGGACAGTTTCACAATTGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGGGCTCAGCACTTTGAACTCTGAGGACAGTTTCACAATTGGGTT  150

seq1  TTTCCTGTCCTAGCCAACATCTGGATCACAGTGGCCCAGGTCAGCGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTCCTAGCCAACATCTGGATCACAGTGGCCCAGGTCAGCGTGTG  200

seq1  CTTGAAACCCTGTGTGAACCTCCCTAAAAGAGCATAGAACAAGCTGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAACCCTGTGTGAACCTCCCTAAAAGAGCATAGAACAAGCTGTCCA  250

seq1  GAGACCAGGGAGGGGCCTATGCCTAGGCCTCCTTCAGCAGCTGTGCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCAGGGAGGGGCCTATGCCTAGGCCTCCTTCAGCAGCTGTGCAAGC  300

seq1  TAGGGCCATTTCAGAAGCAGATAAGAAAGTCATGGTTTGGTGCTCCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCCATTTCAGAAGCAGATAAGAAAGTCATGGTTTGGTGCTCCATCA  350

seq1  CTGATTGAACAATTATCAATCATTATATCATTATTTTGACTTGTTCTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGAACAATTATCAATCATTATATCATTATTTTGACTTGTTCTCAC  400

seq1  TGTGTGCTGGGATACATGGGAGACTCCTGTTGCTACAAATAACGTATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCTGGGATACATGGGAGACTCCTGTTGCTACAAATAACGTATATA  450

seq1  TTATTTTTTAAAGAGTATTAGCCAGTTCTCATATTACCTTCTAACCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTAAAGAGTATTAGCCAGTTCTCATATTACCTTCTAACCCTGA  500

seq1  ATAGTGGTCCCCTTCTCAGCTAGGTATGTGTCATCTCTAACCCTTTATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGTCCCCTTCTCAGCTAGGTATGTGTCATCTCTAACCCTTTATCA  550

seq1  CATTTACACAGATGTTGGTATCTATCTATGTATAGGACATTTTTACAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACACAGATGTTGGTATCTATCTATGTATAGGACATTTTTACAATG  600

seq1  ATAGAGCAGCGCTATACTTGCTGGGCAGCATACTACTTTATTTTACTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCAGCGCTATACTTGCTGGGCAGCATACTACTTTATTTTACTTTA  650

seq1  TGTACTCTTATGGATAGCTTTCCAAACACCGCTCTGTCTCATTCTTATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTTATGGATAGCTTTCCAAACACCGCTCTGTCTCATTCTTATAC  700

seq1  TCCACTGCAGGGAACCCTGTGCTATGTTCTACTTTCTCTGACTGATAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGCAGGGAACCCTGTGCTATGTTCTACTTTCTCTGACTGATAGAC  750

seq1  ATTTAGGTCGTCTTCAATTTTGTGCCACTGCTGCTATAAACAGTTATGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGTCGTCTTCAATTTTGTGCCACTGCTGCTATAAACAGTTATGCG  800

seq1  GTAAACATTCATAATATCTACTTATGTGTGTTTACCTGTTTTTTTACTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACATTCATAATATCTACTTATGTGTGTTTACCTGTTTTTTTACTTA  850

seq1  TTCATAATGAGTTTCCAGAAGTCGAATAGTTGAGTTCATGAGTATTTGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATGAGTTTCCAGAAGTCGAATAGTTGAGTTCATGAGTATTTGTC  900

seq1  CTTTTCAGCTATCATAGATATTACCAAATAGTTCCCAAACAGGCCATTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGCTATCATAGATATTACCAAATAGTTCCCAAACAGGCCATTCT  950

seq1  CATACAATGGCATGTCCAAGTGTCCGTCCCCTGCCCCTACCAGTTCT-GG  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CATACAATGGCATGTCCAAGTGTCCGTCCCCTGCCCCTACCAGTTCTGGG  1000

seq1  AAATCCCCTC-TTTTATTTTTTCTAATCTTATAGGCAAAGCAACTATTGT  1048
      |||||||||| |||||||||||   |||||||||||||||| ||||||||
seq2  AAATCCCCTCTTTTTATTTTTTTCTATCTTATAGGCAAAGC-ACTATTGT  1049

seq1  CCTGGTTCATATGCCCCCAATTTGTGATATTGTAAAATA-TCTCTCACAT  1097
       ||| |||||||||||||||||||||||||||  ||||| ||||||||||
seq2  -CTGCTTCATATGCCCCCAATTTGTGATATTGGTAAATATTCTCTCACAT  1098

seq1  -CTGTCCATTAGCACTAATTTTTTAAAAATCCTGTCTCCATGGAGTCCAT  1146
       |||||   ||||||| | ||||| ||||| |||||| ||| | || |||
seq2  CCTGTC--ATAGCACTTACTTTTTTAAAATTCTGTCT-CAT-GTGT-CAT  1143

seq1  GATCACTGTCACGACTTACTGATG-CTTTG-ATCTCC  1181
      ||||||||| ||||| ||||||||  |||| ||||||
seq2  GATCACTGT-ACGAC-TACTGATGTATTTGAATCTCC  1178


seq1: chr7_121182060_121183200
seq2: B6Ng01-329G12.g_65_1214 (reverse)

seq1  AATGGC-TCAGTGG--TTAAGAGCTGGCTGCTCATCCTG-AGTTCAAGTC  46
      |||||| || ||||  | ||||||| ||||||||||||| ||||||  ||
seq2  AATGGCTTCCGTGGGTTAAAGAGCT-GCTGCTCATCCTGAAGTTCAGTTC  49

seq1  CCAGCAACCACATGGTGGCT-AACAACCA-TCTGTAA-TGGGATCCAATG  93
      ||||||||  ||| |||||| |||||| | ||||||| ||| ||||||||
seq2  CCAGCAACACCAT-GTGGCTAAACAACAATTCTGTAATTGGAATCCAATG  98

seq1  CCGT-CTTCTGGTGTG--TCTGAAGATAGCTACAGTGTATTCACATACAT  140
      |||| |||||||||||  |||||   ||||||||||||||||||||||||
seq2  CCGTCCTTCTGGTGTGGTTCTGAGATTAGCTACAGTGTATTCACATACAT  148

seq1  AAAATAAA-TAAATCTTAAAAAGAAG-AAAAAAAAAAAAAAGAAAAGAAA  188
      |||||||| |||||||| |||||||| |||||||||||||||||||||||
seq2  AAAATAAATTAAATCTT-AAAAGAAGAAAAAAAAAAAAAAAGAAAAGAAA  197

seq1  AGGAAAAGGAAAGACAGTCCATCTGGCTGGCATGCCTTTAACCCCAAGCA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGGAAAGACAGTCCATCTGGCTGGCATGCCTTTAACCCCAAGCA  247

seq1  CTCAGGAGGCAGAGGCCAGCCTGGTCTACAGAGCTAGTTCTAGGACAGCC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGGCAGAGGCCAGCCTGGTCTACAGAGCTAGTTCTAGGACAGCC  297

seq1  AAGGACACACACACAGACACACACACACACACAAACCTGTATAAGGAAAA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACACACACACAGACACACACACACACACAAACCTGTATAAGGAAAA  347

seq1  CAAAACAAACAAAAAGACAGCTCATTCTCTGGCATAGAGATGGACTAAGT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAACAAAAAGACAGCTCATTCTCTGGCATAGAGATGGACTAAGT  397

seq1  TGACAGATCCTTTCCTTAGGGAGTATGGCAGGCAGGCATCAGTCCATACC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGATCCTTTCCTTAGGGAGTATGGCAGGCAGGCATCAGTCCATACC  447

seq1  AGTTAAAGGCTATGTGCTCAGCAGTTTCTCCAGGAAACTGTGCTGCGGTG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGGCTATGTGCTCAGCAGTTTCTCCAGGAAACTGTGCTGCGGTG  497

seq1  TGGTAAACAGGTATCTAATAATAGTCACGAGCATCTGTGTTCAAAGGAGA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAACAGGTATCTAATAATAGTCACGAGCATCTGTGTTCAAAGGAGA  547

seq1  GATATATGGGAAGCGATGACAAGTGCAAACAGGAGGCTTCATCTGTGGAG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGGGAAGCGATGACAAGTGCAAACAGGAGGCTTCATCTGTGGAG  597

seq1  TCAGAGGAGGTTCTTTTGAGGAAGGCATGTCCATGTTTCATAGGGAAAGA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGAGGTTCTTTTGAGGAAGGCATGTCCATGTTTCATAGGGAAAGA  647

seq1  ATTGCTCATTTTACTTACTATTGGGTGGGCTAAAAACTCAGGCAGGGAGG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCATTTTACTTACTATTGGGTGGGCTAAAAACTCAGGCAGGGAGG  697

seq1  CTAATGAAGTAGCTCAGTGCCCTATGGCTGGTCCCTGCTTACAAGTCAGT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAAGTAGCTCAGTGCCCTATGGCTGGTCCCTGCTTACAAGTCAGT  747

seq1  GCTTTAAACAAACCTGTATTAGCGTGAGCCTGCTGCTCAGAGGCAAGCTG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAACAAACCTGTATTAGCGTGAGCCTGCTGCTCAGAGGCAAGCTG  797

seq1  GCTTGGATTCCCTCTTCTGAGGTGTAGCTGTGTTGGACTCAAGTCTCATT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGATTCCCTCTTCTGAGGTGTAGCTGTGTTGGACTCAAGTCTCATT  847

seq1  TGTGCAGCCACAATCAAGTAGGGGTGGCGCAGCACCCCAGCCTCACCTGC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGCCACAATCAAGTAGGGGTGGCGCAGCACCCCAGCCTCACCTGC  897

seq1  TTTCCTGGGGCCTCTCTCCGAGAGGTCTCTGCAGTGAGGTCACCCAGTCT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGGGCCTCTCTCCGAGAGGTCTCTGCAGTGAGGTCACCCAGTCT  947

seq1  TGCCCTCACACCTAGCAGTGGCTTCTCAGGTATGGTGTCTGCTCACATCC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCACACCTAGCAGTGGCTTCTCAGGTATGGTGTCTGCTCACATCC  997

seq1  CATTTGCCAAACCAAGCCCAGCTTCAAAGGGGTGGGGAAACAGACCCTGC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCCAAACCAAGCCCAGCTTCAAAGGGGTGGGGAAACAGACCCTGC  1047

seq1  CCTTCGACAGGCAAAGATCCAGTGCACTAACAGCCACAGCTTTTGCAAAC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGACAGGCAAAGATCCAGTGCACTAACAGCCACAGCTTTTGCAAAC  1097

seq1  CATCACATATGAGCTAACAGCCCCTAATGAGGACAGCAGGCATTAATGAA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACATATGAGCTAACAGCCCCTAATGAGGACAGCAGGCATTAATGAA  1147

seq1  TTC  1141
      |||
seq2  TTC  1150


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