BAC Information

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BAC

Clone NameB6Ng01-332B11
Chromosome7 (Build37)
Map Location 32,794,377 - 32,795,601
singlet/doubletsinglet
Overlap genenone
Upstream geneFxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594
Downstream geneLOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332B11.bB6Ng01-332B11.g
ACCGA118292GA118293
length1,2191,197
definitionB6Ng01-332B11.b B6Ng01-332B11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatggcagccagggctatacatagtcaccctgactcataataca
aaaccactaacaccaacatcaacaagtctctcacattttataatttatac
acggtagaaggctcagaaattctgcctcaaccaagctttaataaaagaag
tggttcagtacaaaataaattatttttaaaaccatcacaagaatctgatt
tcttctatctattataagtccagagtttgaccaaagccactgctcctact
agttggaagagattcctactttgaccagagcaaagcatcatgaacagtaa
taactgactttgaattccaagtcaagggattatcatctccactggcctgt
gtagacagaaacatttgagtattttcctacaaagaaataattagagaagg
ctggagactgtctgtgtgccctcatctctcacattacagtactaagagcc
ttctgttgcagtatctctcctttcaatatatacctaggcaatgaaaacac
aacacaattaatgtacatacatattgtgtgcctagattgggcagatctac
tgctacaataccatcttccacatcaagtgaccccatataaattgcagttt
ctccagaacatttgcttgtgcccctcttctttcttctcccctgcaccttc
ttcctcttcctctttatctttatttctcttcccccaaccttcggctccac
attccctttatttcccaataatcagctctcctttattttacgaattaagg
tgggaagtaggtatgcagctaatcatctaagtgctgactcaatccttgtt
cccaacccctcacaggagaacagaattaacatcaaatatcattagcccca
gagctatctataacagcctttttggggttgctgccctcaatttatactaa
ttaaacatcgtgtatgcatatatttctgtcaagctgtagtgtgcttattc
tatacctgatatccttgaaggaatatacatgaagtcctatgtgttaggct
ttgaatactgtttgacatgatacataccagttcccaggagcgagcagctt
catcacaggacttatagtgatagactcttgagggattatgcagattacaa
gaagcacatgctatgatcctcttccacatttctgtaccccatagaattat
atcttccatgctatgtccacacaatttggtgatgctatataacaaaggca
cttggcgagtcatttttgc
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggactgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggtttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcaa
tcagcaggcgtgggagacaagctctctcctctgagtttcagtggtcagag
cagtctctgcaggcaagctctcctctttcggggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccggttgtctggagt
cgaagatggcgccgcctcagaagctctgtggctctcgccaggaaggtggc
cggttgtctggagacgaagatggcgccgccccagaagctctgcgactctc
acctgtcccagaaacggctggtctctgtattccacacggtcacccgtgca
gcctgccctgcggagtcccggagccaagaaggctcccgccggcacctgtg
acacaaacctctcaggccgggcagacccccgtgctctcaccaggaaggtg
gccggctgtctggagccgaagatggcgccgccccagaggctctgcgactc
tcgcccataccagaaacggctggcctctgtattccacacggtcacccgtg
cagcctgccccgcggagtcccggagccaagaaggctcctgccggctcctg
tgacacaaacctctcagccgggcagacccccgtgctctcaccaggaagtg
gccggctttctggagctgaagatggcgccctcgggtttctttattgtgtc
tacttccctttttagttctagtatggtttgtcatttccatcacctgttgg
atgtgttttcctgtttctttaaggactctactgttgggtgtgttttctgc
ttttcttaagggccttttaacctcctttagccatgctctcctgtaatcta
agtgactatgaaggtcctctgattcccttcatcatcatctgagaaaagtt
caatctggtctgaacttcggtggtgttatgggcgtgcccagacacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32794377_32795601
seq2: B6Ng01-332B11.b_49_1267 (reverse)

seq1  GCAAAAATGACTGCCAAAGTGGCCTTTGTGATATAGCCATCACCCA--TA  48
      ||||||||||||  | |||| |||||||| |||||| ||||||| |  | 
seq2  GCAAAAATGACTCGCCAAGT-GCCTTTGTTATATAG-CATCACCAAATTG  48

seq1  TGTTGACATAAGCATGG-AGATATAA-TCTATGGGGTACAGAAATGTG--  94
      ||| ||||| ||||||| |||||||| |||||||||||||||||||||  
seq2  TGTGGACAT-AGCATGGAAGATATAATTCTATGGGGTACAGAAATGTGGA  97

seq1  AGAGGATTCATTAGCCATGTTGCTCTTGTAATCTGCATAATTCCCCTTCA  144
      |||||| ||| ||| |||||   ||||||||||||||||||   || |||
seq2  AGAGGA-TCA-TAG-CATGTGCTTCTTGTAATCTGCATAAT---CCCTCA  141

seq1  AGAGGTCTATCACTATAAGTCCTGTGATTGAAGCTTGCTCGCTCCTGGGA  194
      ||| ||||||||||||||||||||||| |||||| |||||||||||||||
seq2  AGA-GTCTATCACTATAAGTCCTGTGA-TGAAGC-TGCTCGCTCCTGGGA  188

seq1  ACTGGTATGTATCATGTCAAACAGTATTCAAAGCCTAACACATAGGACTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTATGTATCATGTCAAACAGTATTCAAAGCCTAACACATAGGACTT  238

seq1  CATGTATATTCCTTCAAGGATATCAGGTATAGAATAAGCACACTACAGCT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATATTCCTTCAAGGATATCAGGTATAGAATAAGCACACTACAGCT  288

seq1  TGACAGAAATATATGCATACACGATGTTTAATTAGTATAAATTGAGGGCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAAATATATGCATACACGATGTTTAATTAGTATAAATTGAGGGCA  338

seq1  GCAACCCCAAAAAGGCTGTTATAGATAGCTCTGGGGCTAATGATATTTGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCCAAAAAGGCTGTTATAGATAGCTCTGGGGCTAATGATATTTGA  388

seq1  TGTTAATTCTGTTCTCCTGTGAGGGGTTGGGAACAAGGATTGAGTCAGCA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTCTGTTCTCCTGTGAGGGGTTGGGAACAAGGATTGAGTCAGCA  438

seq1  CTTAGATGATTAGCTGCATACCTACTTCCCACCTTAATTCGTAAAATAAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATGATTAGCTGCATACCTACTTCCCACCTTAATTCGTAAAATAAA  488

seq1  GGAGAGCTGATTATTGGGAAATAAAGGGAATGTGGAGCCGAAGGTTGGGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCTGATTATTGGGAAATAAAGGGAATGTGGAGCCGAAGGTTGGGG  538

seq1  GAAGAGAAATAAAGATAAAGAGGAAGAGGAAGAAGGTGCAGGGGAGAAGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAATAAAGATAAAGAGGAAGAGGAAGAAGGTGCAGGGGAGAAGA  588

seq1  AAGAAGAGGGGCACAAGCAAATGTTCTGGAGAAACTGCAATTTATATGGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGGGGCACAAGCAAATGTTCTGGAGAAACTGCAATTTATATGGG  638

seq1  GTCACTTGATGTGGAAGATGGTATTGTAGCAGTAGATCTGCCCAATCTAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTGATGTGGAAGATGGTATTGTAGCAGTAGATCTGCCCAATCTAG  688

seq1  GCACACAATATGTATGTACATTAATTGTGTTGTGTTTTCATTGCCTAGGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAATATGTATGTACATTAATTGTGTTGTGTTTTCATTGCCTAGGT  738

seq1  ATATATTGAAAGGAGAGATACTGCAACAGAAGGCTCTTAGTACTGTAATG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGAAAGGAGAGATACTGCAACAGAAGGCTCTTAGTACTGTAATG  788

seq1  TGAGAGATGAGGGCACACAGACAGTCTCCAGCCTTCTCTAATTATTTCTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGATGAGGGCACACAGACAGTCTCCAGCCTTCTCTAATTATTTCTT  838

seq1  TGTAGGAAAATACTCAAATGTTTCTGTCTACACAGGCCAGTGGAGATGAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAAAATACTCAAATGTTTCTGTCTACACAGGCCAGTGGAGATGAT  888

seq1  AATCCCTTGACTTGGAATTCAAAGTCAGTTATTACTGTTCATGATGCTTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTTGACTTGGAATTCAAAGTCAGTTATTACTGTTCATGATGCTTT  938

seq1  GCTCTGGTCAAAGTAGGAATCTCTTCCAACTAGTAGGAGCAGTGGCTTTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGTCAAAGTAGGAATCTCTTCCAACTAGTAGGAGCAGTGGCTTTG  988

seq1  GTCAAACTCTGGACTTATAATAGATAGAAGAAATCAGATTCTTGTGATGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACTCTGGACTTATAATAGATAGAAGAAATCAGATTCTTGTGATGG  1038

seq1  TTTTAAAAATAATTTATTTTGTACTGAACCACTTCTTTTATTAAAGCTTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATAATTTATTTTGTACTGAACCACTTCTTTTATTAAAGCTTG  1088

seq1  GTTGAGGCAGAATTTCTGAGCCTTCTACCGTGTATAAATTATAAAATGTG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGCAGAATTTCTGAGCCTTCTACCGTGTATAAATTATAAAATGTG  1138

seq1  AGAGACTTGTTGATGTTGGTGTTAGTGGTTTTGTATTATGAGTCAGGGTG  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTGTTGATGTTGGTGTTAGTGGTTTTGTATTATGAGTCAGGGTG  1188

seq1  ACTATGTATAGCCCTGGCTGCCATGGAATTC  1225
      |||||||||||||||||||||||||||||||
seq2  ACTATGTATAGCCCTGGCTGCCATGGAATTC  1219