BAC Information

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BAC

Clone NameB6Ng01-332F14
Chromosome7 (Build37)
Map Location 110,317,070 - 110,318,220
singlet/doubletsinglet
Overlap genenone
Upstream geneNup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1
Downstream geneOlfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332F14.bB6Ng01-332F14.g
ACCGA118475GA118476
length1,1371,222
definitionB6Ng01-332F14.b B6Ng01-332F14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcatactctatacaacaaaatttccagagtatactgggaaaa
atacctaattttagagacatttaagattatcaatgtctcatgataaaaac
ctaaacctccacagtaatttttatcagtaagaaagtttatgctttaaact
cacatttttttgttttattctttgaaaattctatagatgaaaatgtatat
taaataatgggttgttataaagcatgaatgtaatagaagtaatcttcgac
agccatgatgtaagaaagtgcatttctgagaactttggtgaaatttggct
ttagataataataagattttaagaaaattatgatatcaaagccatataga
ctttgaatgcttgtttatctactcgctggccaatagaatacacaaatgta
taattattaaccatttgctatttgtgaacactagtctagatgaagtcata
tgagttaagtaatgaaatacacaaaatgcatattataaaaatttaaatcc
agtaaacaattattgattcttctcataattttatttttttaagagatgaa
gctcttgccttatattttcatatagtcaatgggaaatttacttgtttttc
cattcacatagtgaaaagggcagaaaacttaaaaatcatggatgtcagaa
tgcaatttctactgtagtgttgccttctctgtagttacatttgaatccaa
acatgctgtgagtagtcttttctatatggctgttataatttctgcatagt
tctggtgagagtcactcatgagaaacaataaatgctattgaaaaccaaaa
gatacaataacagtcaaagagtaagagtgttacctgcagattcatgaaaa
tgtgtctaggaacagatttccgtcaagcctgaagtatgtgataatgactt
cagaagcctaagagaatatgatgactggaaaaaaatggcatatctataaa
acaattgtacaaaaatggggacaatataaaaacatttataggtattttac
acacatgctatcattagaaaatattaaatattgtatttgtgtatgtagtg
aacaagacacttataatatgattataaacagcatcacagatgtcaatgtt
atacatttaaaatcatttctcaccctcactcgatttt
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaatcgggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccattttcccggttcggaatcttcct
gagaagcaagcaataaagctcttgccgcggaagattctggtttgttgcgt
ctttcttgccggttgagcgggacgcaataagtggcgccgaagaacccggg
aactgtcatcacaccggcgcaaggaagatccctcgttcgcggggcagaat
cagaaccgtgggacaaaaggctctacaaggtacgtacaatcttgaaattt
cttcagagttagaagcccttttgattgtttgcacggcgattacacttttc
ctttcggtttcattttgtttccaccactggaactgctgactggttcttag
tcgcggtcaggcctggacagcgcctggacagtgaccaatttcagtcgcgg
tcaggcctgaacagcggcagtatgggaatctcccattcttacgctcccag
ccttacgcttggtcttgaagcagtgtggcctaaaaatcaccactaagacc
ttagagggatttgtcagagagatagaccgtgtcgtaccatggtatgcttg
ctcagggtcattaactgtcgcctcttgggacaaactgaaaggagatctag
ttagggaacagcagaaaggcaaacttaaagcagggattatgccgctatgg
aaattggtgaaatcgtgtttaacagatgaggattgtcagcaaatggtaga
agcggggcagaaatttctggacgaaattcaagaaagtctatcagaggtag
agcggggagagagagtaaaagtagagaggaaacaaagtgcactgaagaat
ttaggcctttccacgggcccttgagcccgaggaaaagagatataaaggaa
agaatgccttggggagagattagaaaaagggatgaaagggagagaagaag
gagatcgagctggagaaggcacataaggaaaggagcctctaccacaactg
gatgaatttagcagctcttagtagctcaaaccagatgaaggatagcgcct
cttgaagaaacgaactcggaggagtagcagttcgtattacgggagaaagg
tacagcagaataaatgtaagcctactcagttctgaaaatgcaaaagcgct
tggccgaagcacagactcttcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110317070_110318220
seq2: B6Ng01-332F14.b_45_1181

seq1  GAATTCCTTCATACTCTATACAACAAAATTTCCAGAGTATACTGGGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCATACTCTATACAACAAAATTTCCAGAGTATACTGGGAAAA  50

seq1  ATACCTAATTTTAGAGACATTTAAGATTATCAATGTCTCATGATAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAATTTTAGAGACATTTAAGATTATCAATGTCTCATGATAAAAAC  100

seq1  CTAAACCTCCACAGTAATTTTTATCAGTAAGAAAGTTTATGCTTTAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCTCCACAGTAATTTTTATCAGTAAGAAAGTTTATGCTTTAAACT  150

seq1  CACATTTTTTTGTTTTATTCTTTGAAAATTCTATAGATGAAAATGTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTTTTGTTTTATTCTTTGAAAATTCTATAGATGAAAATGTATAT  200

seq1  TAAATAATGGGTTGTTATAAAGCATGAATGTAATAGAAGTAATCTTCGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATGGGTTGTTATAAAGCATGAATGTAATAGAAGTAATCTTCGAC  250

seq1  AGCCATGATGTAAGAAAGTGCATTTCTGAGAACTTTGGTGAAATTTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGATGTAAGAAAGTGCATTTCTGAGAACTTTGGTGAAATTTGGCT  300

seq1  TTAGATAATAATAAGATTTTAAGAAAATTATGATATCAAAGCCATATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAATAATAAGATTTTAAGAAAATTATGATATCAAAGCCATATAGA  350

seq1  CTTTGAATGCTTGTTTATCTACTCGCTGGCCAATAGAATACACAAATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATGCTTGTTTATCTACTCGCTGGCCAATAGAATACACAAATGTA  400

seq1  TAATTATTAACCATTTGCTATTTGTGAACACTAGTCTAGATGAAGTCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTAACCATTTGCTATTTGTGAACACTAGTCTAGATGAAGTCATA  450

seq1  TGAGTTAAGTAATGAAATACACAAAATGCATATTATAAAAATTTAAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAAGTAATGAAATACACAAAATGCATATTATAAAAATTTAAATCC  500

seq1  AGTAAACAATTATTGATTCTTCTCATAATTTTATTTTTTTAAGAGATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACAATTATTGATTCTTCTCATAATTTTATTTTTTTAAGAGATGAA  550

seq1  GCTCTTGCCTTATATTTTCATATAGTCAATGGGAAATTTACTTGTTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGCCTTATATTTTCATATAGTCAATGGGAAATTTACTTGTTTTTC  600

seq1  CATTCACATAGTGAAAAGGGCAGAAAACTTAAAAATCATGGATGTCAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACATAGTGAAAAGGGCAGAAAACTTAAAAATCATGGATGTCAGAA  650

seq1  TGCAATTTCTACTGTAGTGTTGCCTTCTCTGTAGTTACATTTGAATCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTTCTACTGTAGTGTTGCCTTCTCTGTAGTTACATTTGAATCCAA  700

seq1  ACATGCTGTGAGTAGTCTTTTCTATATGGCTGTTATAATTTCTGCATAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGTGAGTAGTCTTTTCTATATGGCTGTTATAATTTCTGCATAGT  750

seq1  TCTGGTGAGAGTCACTCATGAGAAACAATAAATGCTATTGAAAACCAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGAGAGTCACTCATGAGAAACAATAAATGCTATTGAAAACCAAAA  800

seq1  GATACAATAACAGTCAAAGAGTAAGAGTGTTACCTGCAGATTCATGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAATAACAGTCAAAGAGTAAGAGTGTTACCTGCAGATTCATGAAAA  850

seq1  TGTGTCTAGGAACAGATTTCCGTCAAGCCTGAAGTATGTGATAATGACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTAGGAACAGATTTCCGTCAAGCCTGAAGTATGTGATAATGACTT  900

seq1  CAGAAGCCTAAGAGAATATGATGACTGGAAAAAAATGGCATATCTATAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGAAGCCTAAGAGAATATGATGACTGGAAAAAAATGGCATATCTAT-AA  949

seq1  AACAATTGTACAAAAATGGGGACAAATAATAAAACATTTATAAGGTATTT  1000
      ||||||||||||||||||||||| ||||  ||||||||||| ||||||||
seq2  AACAATTGTACAAAAATGGGGAC-AATATAAAAACATTTAT-AGGTATTT  997

seq1  TAACACACATGCTATCATTAAGAAAATATTAAAATATGTATTTGTGTAAT  1050
      | ||||||||||||||||| |||||||||||||   ||||||||||| ||
seq2  T-ACACACATGCTATCATT-AGAAAATATTAAATATTGTATTTGTGT-AT  1044

seq1  GTAGTGAACAAGACACTTATTAATATGATTATAAACAGCCAATCACAGAT  1100
      ||||||||||||||||||| |||||||||||||||||||  |||||||||
seq2  GTAGTGAACAAGACACTTA-TAATATGATTATAAACAGC--ATCACAGAT  1091

seq1  GTCACATGTTATTACCATTTTAAAATCCATTCTCACCCTCACTCAGATTT  1150
      |||| |||||| |||   |||||||||  ||||||||||||||| |||||
seq2  GTCA-ATGTTA-TAC--ATTTAAAATCATTTCTCACCCTCACTC-GATTT  1136

seq1  T  1151
      |
seq2  T  1137